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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:917187..919639- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008081-T1 ID=KJC3_008081-T1|Name=KJC3_008081-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2453bp|location=Sequence derived from alignment at ch6:917187..919639- (Aspergillus niger KJC3)
GGAAGACCCAGTGGTCGCGCTGCTCCATCGGTTCTGCTCCGATTCCCTGG
CCTTTGAAGGTGGTGATCCACGCCCGGCGTTTCACTTTGCGATCTCATTT
CGCGGTGCGCGAACGAAATCGCTGCTGCCTTCCCTCGGGCTTATGTGTCA
TTAAAGTTATGGCGCTAATCAGGGCAAATCCTTACGAGTGTTCATTTCGT
TAGATTGATGGTTGCTGATGGATCACACTATTCTGGCTCTGGGGCCAGAC
GCCCCGAGTGCTCGTTCTCCTGCTCCTCGCCTCTTATTATCCTACGAGGT
TCCTTCTTTCTTCAGTGTCCTCTCTCTTTGTCGCTCTTTTGCCATTCTGT
CTGGAACAGCAGATTTTACACCCCTGGGATTTGAAATCCTGTCCATTCCT
TACTGACCATTGTTGTGTTGACTGCACGTCCTGTCTTTACTGTGATTCCA
CGCCATTTCTTGGCCGGCAAAGAGAGAAAGACATCCATTCTTTATTTCAT
TTCTTGGCACCTTGTCTGAGACACTTTTCTCCATCTTTCAAACATGAAGT
ATCGATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGCTGCGACG
GTCTCTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAATGCCCCCA
AGGCTACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAGCCCTCCT
CGACTGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGGTGAAGGC
CAATGTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGATCCCTCT
CCAGCCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCCGCTGTTG
AGCCAACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGATTGATCAG
GTTACTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGGTCGTGAC
TGCAACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGCGCTGCAC
CAGTTGCCACCACCCCCTCCGCTGCCGAAGCTTCCCCTGCTGCTGAGACT
AGCACTGCTGTGGAGGCTACCTCTTCTTCCTCTTCCTCGGTCGTTGAGGT
GACGACCAATGCTGCTGCCAATGCCGCCGCAACTACTGCTGCCGCTCAGC
CTACCCCTGAGGCTGTTACCACTGAGGTTGCAACTACTGAAGCTGCCGCG
ACCACCGAAGCAGCTGCCCAGCCTAGCCCTGAAGCCGCTACCACCGAGGC
TGTTACTACCCAGGCTGCTGCTGCCGCTGCTACCACCGAAGCTGCCACTA
CCCAGGAGGCTGCTGCTGCTGCTACCACTGAAGCCGTTGTTCAGTCTACC
GCTGAGGCCGCTACTACTGAGGCCGCCACTACCGAAGCTGCTGCTGCTAC
CCAGGCCGCCGCCACTACTGTCGAATCCAAGTCTACTTCTACTAGCTCGA
CCGCTGCTAGCGCCGCGACCTCGTCTGCCTCCAGCTCCAGCTCTTCCACC
TCTAGTGCCCTGAGTTCCGAGTACTCGGGTGAAGCAACTTTCTACGGCGG
TAACGTCTCGGGCGGAACCTGCTCGTTCACCGAGTACACCATCCCCTCTG
GCCTCTTTGGCACGGCCCTCTCCTCCCAACGCTGGGACAACGCAGCCGAA
TGTGGTGCCTGTGTCGAGGTCACTGGCCCTAGCGGTACCAAGATCAAGGC
CATGGTAAGTCTTATCTCCTAAGCACTTCCCTACGCGCTTTTGTTCCTTT
CTTCCTGTCTCTAACAAACATCAAGGTTGTCGACGAATGTCCCGAATGCG
ACTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACTGGCCGAC
ATCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCTGCGGTAT
CACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCCTACTGGT
TCGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCTCGAGGTC
AGCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCTCCTACAA
TTACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGATGTCCGTG
TCACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAGCGTCTCG
TCTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAACTTGGTGATGT
GATTTGACTAACTGGGTGTCTGCGATGATGGGATATGATGTTGTACTCTT
TCTAAGATTATAATTCTCTGGGAGTGCGTGCCGAGATTGGTCATGCCTCT
GCTTCTTTGGTGTATTAGCGCTTTGTTTGAGGGCTTCTTTATACAAATCT
TATAAACTTCTTGTATATACTTTTTGAGATCCTCCTTAGATCGCCACTAT
TACTGCTTATGTCTAAGAATGACACTAACCCTGCCATCAACCGCACCACG
TCG back to topCoding sequence (CDS) from alignment at ch6:917187..919639- >KJC3_008081-T1 ID=KJC3_008081-T1|Name=KJC3_008081-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch6:917187..919639- (Aspergillus niger KJC3)
GTTGTCGACGAATGTCCCGAATGCGACTCCAACCACCTCGATCTCTTTGA
GAGCGCCTTCTCTGAACTGGCCGACATCTCTAAGGGCGTTATCAGCATCG
ACTGGGAGTACGTTGCCTGCGGTATCACCTCCCCGATCGAACTGGTCAAC
AAGAGCGGCACCTCCGCCTACTGGTTCGCCATGCAGGTAGTCAACTCCAA
CCTGCCCGTCACCAAGCTCGAGGTCAGCACCGACAGCGGTAGCACCTGGC
AATCTACCACCCGTTCCTCCTACAATTACTTCGAGAACCAGAGCGGTTTC
GGTACTGACACCGTTGATGTCCGTGTCACTGCCGAGGGTGGTTCTCAGAT
TACCGTCAAGAACGTCAGCGTCTCGTCTGGCTCGTCTGTCACTGCTTCCT
CCAACTTCGAGTAAATGAAGTATCGATGCCTCGCCTCTTTGGGCATTGCT
GCCCTGGGTGCCGCTGCGACGGTCTCTGCCAACCCACTGCTGAACCGCGA
AGCTGAAGGTCAATGCCCCCAAGGCTACACCCAGAGCGTCTACTACAAGA
CTATCACCCTCCAGCCCTCCTCGACTGCGTCAACTGCGCCAACCTCTACG
CTCGCCAGTGCAGGTGAAGGCCAATGTCCCGTTGGTTACACCCAGAGCGT
CTACTACAAGACGATCCCTCTCCAGCCTACTTCAACTGCATCCGTCGAGC
CAACTTCTGCTCCCGCTGTTGAGCCAACCTCGACCCCTGCTGTCGAGTCG
AGCTCTACCTCGATTGATCAGGTTACTACTCTGCACTCGTCTTCCACCGT
TATCGTGACTGAGGTCGTGACTGCAACCCCTGCGGTCGCCACCACGAGCT
CCGCGGTCGAGAGCGCTGCACCAGTTGCCACCACCCCCTCCGCTGCCGAA
GCTTCCCCTGCTGCTGAGACTAGCACTGCTGTGGAGGCTACCTCTTCTTC
CTCTTCCTCGGTCGTTGAGGTGACGACCAATGCTGCTGCCAATGCCGCCG
CAACTACTGCTGCCGCTCAGCCTACCCCTGAGGCTGTTACCACTGAGGTT
GCAACTACTGAAGCTGCCGCGACCACCGAAGCAGCTGCCCAGCCTAGCCC
TGAAGCCGCTACCACCGAGGCTGTTACTACCCAGGCTGCTGCTGCCGCTG
CTACCACCGAAGCTGCCACTACCCAGGAGGCTGCTGCTGCTGCTACCACT
GAAGCCGTTGTTCAGTCTACCGCTGAGGCCGCTACTACTGAGGCCGCCAC
TACCGAAGCTGCTGCTGCTACCCAGGCCGCCGCCACTACTGTCGAATCCA
AGTCTACTTCTACTAGCTCGACCGCTGCTAGCGCCGCGACCTCGTCTGCC
TCCAGCTCCAGCTCTTCCACCTCTAGTGCCCTGAGTTCCGAGTACTCGGG
TGAAGCAACTTTCTACGGCGGTAACGTCTCGGGCGGAACCTGCTCGTTCA
CCGAGTACACCATCCCCTCTGGCCTCTTTGGCACGGCCCTCTCCTCCCAA
CGCTGGGACAACGCAGCCGAATGTGGTGCCTGTGTCGAGGTCACTGGCCC
TAGCGGTACCAAGATCAAGGCCATGGTTGTCGACGAATGTCCCGAATGCG
ACTCCAACCACCTCGATCTCTTTGAGAGCGCCTTCTCTGAACTGGCCGAC
ATCTCTAAGGGCGTTATCAGCATCGACTGGGAGTACGTTGCCTGCGGTAT
CACCTCCCCGATCGAACTGGTCAACAAGAGCGGCACCTCCGCCTACTGGT
TCGCCATGCAGGTAGTCAACTCCAACCTGCCCGTCACCAAGCTCGAGGTC
AGCACCGACAGCGGTAGCACCTGGCAATCTACCACCCGTTCCTCCTACAA
TTACTTCGAGAACCAGAGCGGTTTCGGTACTGACACCGTTGATGTCCGTG
TCACTGCCGAGGGTGGTTCTCAGATTACCGTCAAGAACGTCAGCGTCTCG
TCTGGCTCGTCTGTCACTGCTTCCTCCAACTTCGAGTAAATGAAGTATCG
ATGCCTCGCCTCTTTGGGCATTGCTGCCCTGGGTGCCGCTGCGACGGTCT
CTGCCAACCCACTGCTGAACCGCGAAGCTGAAGGTCAATGCCCCCAAGGC
TACACCCAGAGCGTCTACTACAAGACTATCACCCTCCAGCCCTCCTCGAC
TGCGTCAACTGCGCCAACCTCTACGCTCGCCAGTGCAGGTGAAGGCCAAT
GTCCCGTTGGTTACACCCAGAGCGTCTACTACAAGACGATCCCTCTCCAG
CCTACTTCAACTGCATCCGTCGAGCCAACTTCTGCTCCCGCTGTTGAGCC
AACCTCGACCCCTGCTGTCGAGTCGAGCTCTACCTCGATTGATCAGGTTA
CTACTCTGCACTCGTCTTCCACCGTTATCGTGACTGAGGTCGTGACTGCA
ACCCCTGCGGTCGCCACCACGAGCTCCGCGGTCGAGAGCGCTGCACCAGT
TGCCACCACCCCCTCCGCTGCCGAAGCTTCCCCTGCTGCTGAGACTAGCA
CTGCTGTGGAGGCTACCTCTTCTTCCTCTTCCTCGGTCGTTGAGGTGACG
ACCAATGCTGCTGCCAATGCCGCCGCAACTACTGCTGCCGCTCAGCCTAC
CCCTGAGGCTGTTACCACTGAGGTTGCAACTACTGAAGCTGCCGCGACCA
CCGAAGCAGCTGCCCAGCCTAGCCCTGAAGCCGCTACCACCGAGGCTGTT
ACTACCCAGGCTGCTGCTGCCGCTGCTACCACCGAAGCTGCCACTACCCA
GGAGGCTGCTGCTGCTGCTACCACTGAAGCCGTTGTTCAGTCTACCGCTG
AGGCCGCTACTACTGAGGCCGCCACTACCGAAGCTGCTGCTGCTACCCAG
GCCGCCGCCACTACTGTCGAATCCAAGTCTACTTCTACTAGCTCGACCGC
TGCTAGCGCCGCGACCTCGTCTGCCTCCAGCTCCAGCTCTTCCACCTCTA
GTGCCCTGAGTTCCGAGTACTCGGGTGAAGCAACTTTCTACGGCGGTAAC
GTCTCGGGCGGAACCTGCTCGTTCACCGAGTACACCATCCCCTCTGGCCT
CTTTGGCACGGCCCTCTCCTCCCAACGCTGGGACAACGCAGCCGAATGTG
GTGCCTGTGTCGAGGTCACTGGCCCTAGCGGTACCAAGATCAAGGCCATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008081-T1.utr3p1 | KJC3_008081-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008081-T1.utr5p1 | KJC3_008081-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:CBM63 |
| DBxref | InterPro:IPR007112 |
| DBxref | InterPro:IPR036908 |
| DBxref | InterPro:IPR036749 |
| DBxref | InterPro:IPR009009 |
| DBxref | PFAM:PF03330 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:917187..919639 - |
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