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KJC3_008088-T1, KJC3_008088-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008088-T1
Unique NameKJC3_008088-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:939599..941380-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008088-T1 ID=KJC3_008088-T1|Name=KJC3_008088-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1782bp|location=Sequence derived from alignment at ch6:939599..941380- (Aspergillus niger KJC3)
ATGGTATTTGCTCTCCGCCATTCCCCCGAAGCTGCTTCGATAACCTCCCC
GGACCCATTGACTAAAATGAAACGCAAGCATCCAGAATCCGATGATCAAT
TCCCTATCTCTACGCCCAAGAGGCAGAGGACTACGGCTACCAATGGCACC
GTAAATGGGCATACCAACGGTGAACGTGAACGAACCCCCGAAGCCACCAC
CACCCCTACGAAACGAGTGAAATCGACACCTCAAAAAGCCCAGGCCGACA
ACACACCGGCAGCTCTTAAAGCTTCAGGGCTGAAGACTCCAACACAGAAG
GCCAAAGCGAAGAACCTGTTTTCAACGCCCACGAAAAAGTCAACTGTTGC
AACCCCGTCGAAAGCCCGTGCCGACCGGTCCGCTAAGAAGAAGAGCGCTC
GTCTTCTCCTTGAACAGGATGACGAGGAGATATGGGACGGTGCTGATCGT
CTTGCGGAGGAGATCCTACAGGATGATACCAACGAGGCCCCTGACAAAAT
ATCAGTGACAGGGAACGGTGTATTAGAATCCATCGAGGAGGAGTCTACTC
AACCAGCCGCAAAAGATGCGGCAGAAGCAGCACCCACACCCAAACGTCGT
GCAGGACGACCAAAGGGCGCAAAGAACAAGCGTTCTCCCACACCAGAAGG
AGAACTCCCAGCCCATGAGCGATACTTTTTCCAAAACCGCGCCGGACCAC
CCCGTACTTCGAACAACAACCTAGGCAAAGTAAACCTCTTAACGCACGAG
GAGTACTTCGAAAGGATGTCACAATACGCAGACCCATACAAACAAGAGAA
GTCTTTCCTTCTCGACCTCCACTGCCGGTCCTTCCCTCAGTGGGACTTCG
AGTTCGACCAAGGCTTCAATATTTGCCTCTACGGCTACGGCTCCAAGCGC
CGCCTTCTCCAAGAATTCGCAGACTGGCTCTACCACCGCCATCACAGCAG
TTCCGCCTCGAGCTCCGTAGTCATCGTCAATGGACACACGCCCAACATCT
CCATCCGTTCCATCTTCGCCACGATCGTCACCGCCGTCCTGGGCGCCGAT
ATCCCTTCCAAGATGGGCTCTCAACCCCAAGAAGTCCTCGAATTGCTCCA
GTCCGTATTAAAGTCCCGATCCTCTCAGAAACCAATTACCGTTCTCATCA
ACTCAATCGATGCCCCTGCCCTACGGAGAGCGGCGAACCAAGCCCTCCTT
GCCCGTTTAGCAGCTACGCCGAAGATTCATCTTCTCGCGACGGCGGATAC
CCCGAATCTATTGTTGATGTGGGATCTCAGCCTGCGTGACCAGTTCAACT
TCGTCTTCCACGACTGTACAACCTTCGCGCCGTTTGATACCGAGTTCGAT
GTTGTTGAGGAGGTCAGCACTTTGCTGGGAAGAAAGGGTCGCCGTGTCGG
TGGTAAGGAGGGTGTCGAATTCGTGTTGAAGAGTCTTCCTGAGAACGCAA
GGAACCTGTATCGGTTACTTCTTACGGAGCTGCTCTCTATGGCTGATGAG
GGACATATATCGGATGATGACGTGGATGGTGGTGTTAATGGGGGAGGGGA
CAGCAGCAACGGCCGAGGAGATGAAACGGGCATTGAGTTCCGGATGCTGT
ATCAGAAAGCGGCGGAGGAGTTCATTGCCTCGTCGGAGATGATGTTCCGG
ACATTGTTGAAGGAGTTTCATGATCATCAAATGATTACTTCGCGGATGGA
TACCAGTGGCATGGAAATTTTGGGAGTGCCATTGGCACGTGACGAGATGG
AGGGTGTTTTGGAAGATCTGGTATTGAGTTGA
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Coding sequence (CDS) from alignment at ch6:939599..941380-

>KJC3_008088-T1 ID=KJC3_008088-T1|Name=KJC3_008088-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch6:939599..941380- (Aspergillus niger KJC3)
ATGGTATTTGCTCTCCGCCATTCCCCCGAAGCTGCTTCGATAACCTCCCC
GGACCCATTGACTAAAATGAAACGCAAGCATCCAGAATCCGATGATCAAT
TCCCTATCTCTACGCCCAAGAGGCAGAGGACTACGGCTACCAATGGCACC
GTAAATGGGCATACCAACGGTGAACGTGAACGAACCCCCGAAGCCACCAC
CACCCCTACGAAACGAGTGAAATCGACACCTCAAAAAGCCCAGGCCGACA
ACACACCGGCAGCTCTTAAAGCTTCAGGGCTGAAGACTCCAACACAGAAG
GCCAAAGCGAAGAACCTGTTTTCAACGCCCACGAAAAAGTCAACTGTTGC
AACCCCGTCGAAAGCCCGTGCCGACCGGTCCGCTAAGAAGAAGAGCGCTC
GTCTTCTCCTTGAACAGGATGACGAGGAGATATGGGACGGTGCTGATCGT
CTTGCGGAGGAGATCCTACAGGATGATACCAACGAGGCCCCTGACAAAAT
ATCAGTGACAGGGAACGGTGTATTAGAATCCATCGAGGAGGAGTCTACTC
AACCAGCCGCAAAAGATGCGGCAGAAGCAGCACCCACACCCAAACGTCGT
GCAGGACGACCAAAGGGCGCAAAGAACAAGCGTTCTCCCACACCAGAAGG
AGAACTCCCAGCCCATGAGCGATACTTTTTCCAAAACCGCGCCGGACCAC
CCCGTACTTCGAACAACAACCTAGGCAAAGTAAACCTCTTAACGCACGAG
GAGTACTTCGAAAGGATGTCACAATACGCAGACCCATACAAACAAGAGAA
GTCTTTCCTTCTCGACCTCCACTGCCGGTCCTTCCCTCAGTGGGACTTCG
AGTTCGACCAAGGCTTCAATATTTGCCTCTACGGCTACGGCTCCAAGCGC
CGCCTTCTCCAAGAATTCGCAGACTGGCTCTACCACCGCCATCACAGCAG
TTCCGCCTCGAGCTCCGTAGTCATCGTCAATGGACACACGCCCAACATCT
CCATCCGTTCCATCTTCGCCACGATCGTCACCGCCGTCCTGGGCGCCGAT
ATCCCTTCCAAGATGGGCTCTCAACCCCAAGAAGTCCTCGAATTGCTCCA
GTCCGTATTAAAGTCCCGATCCTCTCAGAAACCAATTACCGTTCTCATCA
ACTCAATCGATGCCCCTGCCCTACGGAGAGCGGCGAACCAAGCCCTCCTT
GCCCGTTTAGCAGCTACGCCGAAGATTCATCTTCTCGCGACGGCGGATAC
CCCGAATCTATTGTTGATGTGGGATCTCAGCCTGCGTGACCAGTTCAACT
TCGTCTTCCACGACTGTACAACCTTCGCGCCGTTTGATACCGAGTTCGAT
GTTGTTGAGGAGGTCAGCACTTTGCTGGGAAGAAAGGGTCGCCGTGTCGG
TGGTAAGGAGGGTGTCGAATTCGTGTTGAAGAGTCTTCCTGAGAACGCAA
GGAACCTGTATCGGTTACTTCTTACGGAGCTGCTCTCTATGGCTGATGAG
GGACATATATCGGATGATGACGTGGATGGTGGTGTTAATGGGGGAGGGGA
CAGCAGCAACGGCCGAGGAGATGAAACGGGCATTGAGTTCCGGATGCTGT
ATCAGAAAGCGGCGGAGGAGTTCATTGCCTCGTCGGAGATGATGTTCCGG
ACATTGTTGAAGGAGTTTCATGATCATCAAATGATTACTTCGCGGATGGA
TACCAGTGGCATGGAAATTTTGGGAGTGCCATTGGCACGTGACGAGATGG
AGGGTGTTTTGGAAGATCTGGTATTGAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000808origin recognition complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008088KJC3_008088Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008088-T1.cdsKJC3_008088-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008088-T1.exon1KJC3_008088-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008088-T1KJC3_008088-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007220
DBxrefPFAM:PF04084
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:939599..941380 -
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