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KJC3_008090-T1, KJC3_008090-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008090-T1
Unique NameKJC3_008090-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:943598..945811-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008090-T1 ID=KJC3_008090-T1|Name=KJC3_008090-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2214bp|location=Sequence derived from alignment at ch6:943598..945811- (Aspergillus niger KJC3)
AAAGTGGCCAGCGAGGCGACTCTCGATCGCACCCGCAATCCCCGTCGACC
TCATCGCTTCCTCCCTTTCTCCTCCATCCTCTCTCTCTTCCGTCGTCTTT
TCTTCTTCTCCTTCTCCTTTTGTACTTCCCCTCCATTCCTTCAGCTGGTT
CTCGCCTCCAGCTTTCCTTTCTTTCTTTCCCTCCCCTTTTATTCGAGTAA
TCCTGCAGCTCTGGGAGGTGCAACAGTCACAATGAGCGGACGTGAGTCTT
GCACGCGATCGCTGCCATCTCCGCGACAGCGTTCCATCCTTTACCTCAAT
GGATCAGCAAATGCTGATACTCGATTCTAGTCCGGTTTCTCGATCTCATC
AAGCCCTTCACGCCCCTCCTCCCGGAGGTGGCCGCCCCGGAAACCAAGGT
TCCCTTCAACCAGAAGTTGATGTGGACGGGGGTACGTGATACTTGTCCAG
CTCGACATGAGCTTCTAAGCTAATGGATTACCCCTGCAGTTGACCCTATT
GATCTTCCTGGTCATGAGCCAGATGCCCTTGTACGGAATTGTCTCCTCTG
ACACCTCCGACCCTCTGTACTGGCTCCGTATGATGTTGGCCAGTAACCGG
GGTACCCTGATGGAACTGGGTATCACCCCCATCATCTCCTCTGGCATGGT
TTTCCAGGTATGTAATGGGGAAATTGCAATCTGATCACGGATATCGGGCA
TTTGCTAATATGTGGCTTTTGTCTGATAGCTTCTCGCTGGTACCCACCTC
ATCGATGTCAACCTGGACCTGAAGACCGACCGTGAACTGTATCAGACCGC
TCAGAAGCTCTTCGCTATCATCCTGTCCTTCGGTCAGGCCTGCGTCTACG
TCCTCACTGGTCTTTACGGCCAGCCCAGTGACCTTGGTGCCGGTATCTGT
GTTCTGCTGATTGTTCAGCTGGTCGTTGCTGGCTTGGTTGTCATCCTGCT
GGATGAGCTGCTCCAGAAGGGCTATGGTCTTGGTAGCGGTATCTCTCTGT
TCATCGCGACCAACATCTGCGAGTCGATCGTCTGGAAGGCTTTCTCTCCT
ACGACCATCAACACTGGCCGTGGTCCCGAGTTTGAGGGTGCCATCATTGC
CCTCTTCCACCTTCTGTTGACCTGGTCCGACAAGCAGCGCGCTCTCCGCG
AGGCTTTCTACCGCCAGAACCTCCCCAACATCATGAACCTGCTGGCTACT
CTCCTCGTTTTCGCCGCTGTGATCTACCTCCAGGGCTTCCGTGTTGAGAT
CCCTGTCAAGTCCTCCCGCCAGCGTGGCATGCGTGGTTCCTACCCTGTTC
GCCTGTTCTACACCTCCAACATGCCCATCATGCTTCAGTCTGCTCTGTGC
TCCAACATCTTCCTCATCAGTCAGATGCTGTACTCTCGCTTCTCTGACAA
CCTCCTTGTCAAGCTTCTCGGTGTTTGGGAGCCTCGTGAGGGTTCTGCCC
AGCTCCACGCCGCCTCCGGCATTGCCTACTACATGTCTCCTCCCCTGAAC
TTCAAGGAGGCCCTTCTTGACCCCATTCACACCGCCGTTTACATCACCTT
CATGCTGGTTGCTTGTGCTCTCTTCTCCAAGACCTGGATTGAGGTTTCCG
GCTCTGCTCCCCGCGATGTTGCCAAGCAGCTCAAGGACCAGGGTCTCGTG
ATGGCTGGTCACCGTGAGCAGAGCATGTACAAGGAGCTCAAGCGCGTCAT
CCCTACTGCTGCTGCTTTCGGTGGTGCCTGCATTGGTGCCCTGTCCGTCG
CTTCTGACCTGCTTGGTGCTCTTGGCAGCGGTACTGGTATCCTCCTTGCC
GTTACGTAAGTCTTCACTTTGGTCTCAGATTTTCTGAAGTGGATACTAAC
ATTCAAATGCAGGATTATATACGGATACTTTGAAATTGCCGCCCGTGAGG
GCGACATTGGATCGGGCCTCAAGGGCCTTGTCCCGGGTAACTAGATAAGG
CCCCCTTTTTGATGAAAGCATGAGAAGAAGTTTGAGGGCTTATGTTTGTT
CTTGCAACTTTCTGTTTCTTCTCAGGTAGTGTGCTGTTGTGGCTGGGATC
TGGATTATTTAGTTTCTTGATGGATGTATGGCTAGTTTTAACAATTTGCA
GGAGGGGAAGATCTTCTCTACGGAGATACGTCCACGCCACAGCTGTACAT
AGCACCTACCTGGTTTGTAACCATATTGACAAAAGATCTAAAATTAACTT
AATTGGCTTGACCA
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Coding sequence (CDS) from alignment at ch6:943598..945811-

>KJC3_008090-T1 ID=KJC3_008090-T1|Name=KJC3_008090-T1|organism=Aspergillus niger KJC3|type=CDS|length=5352bp|location=Sequence derived from alignment at ch6:943598..945811- (Aspergillus niger KJC3)
GATTATATACGGATACTTTGAAATTGCCGCCCGTGAGGGCGACATTGGAT
CGGGCCTCAAGGGCCTTGTCCCGGGTAACTAGCTTCTCGCTGGTACCCAC
CTCATCGATGTCAACCTGGACCTGAAGACCGACCGTGAACTGTATCAGAC
CGCTCAGAAGCTCTTCGCTATCATCCTGTCCTTCGGTCAGGCCTGCGTCT
ACGTCCTCACTGGTCTTTACGGCCAGCCCAGTGACCTTGGTGCCGGTATC
TGTGTTCTGCTGATTGTTCAGCTGGTCGTTGCTGGCTTGGTTGTCATCCT
GCTGGATGAGCTGCTCCAGAAGGGCTATGGTCTTGGTAGCGGTATCTCTC
TGTTCATCGCGACCAACATCTGCGAGTCGATCGTCTGGAAGGCTTTCTCT
CCTACGACCATCAACACTGGCCGTGGTCCCGAGTTTGAGGGTGCCATCAT
TGCCCTCTTCCACCTTCTGTTGACCTGGTCCGACAAGCAGCGCGCTCTCC
GCGAGGCTTTCTACCGCCAGAACCTCCCCAACATCATGAACCTGCTGGCT
ACTCTCCTCGTTTTCGCCGCTGTGATCTACCTCCAGGGCTTCCGTGTTGA
GATCCCTGTCAAGTCCTCCCGCCAGCGTGGCATGCGTGGTTCCTACCCTG
TTCGCCTGTTCTACACCTCCAACATGCCCATCATGCTTCAGTCTGCTCTG
TGCTCCAACATCTTCCTCATCAGTCAGATGCTGTACTCTCGCTTCTCTGA
CAACCTCCTTGTCAAGCTTCTCGGTGTTTGGGAGCCTCGTGAGGGTTCTG
CCCAGCTCCACGCCGCCTCCGGCATTGCCTACTACATGTCTCCTCCCCTG
AACTTCAAGGAGGCCCTTCTTGACCCCATTCACACCGCCGTTTACATCAC
CTTCATGCTGGTTGCTTGTGCTCTCTTCTCCAAGACCTGGATTGAGGTTT
CCGGCTCTGCTCCCCGCGATGTTGCCAAGCAGCTCAAGGACCAGGGTCTC
GTGATGGCTGGTCACCGTGAGCAGAGCATGTACAAGGAGCTCAAGCGCGT
CATCCCTACTGCTGCTGCTTTCGGTGGTGCCTGCATTGGTGCCCTGTCCG
TCGCTTCTGACCTGCTTGGTGCTCTTGGCAGCGGTACTGGTATCCTCCTT
GCCGTTACTTGACCCTATTGATCTTCCTGGTCATGAGCCAGATGCCCTTG
TACGGAATTGTCTCCTCTGACACCTCCGACCCTCTGTACTGGCTCCGTAT
GATGTTGGCCAGTAACCGGGGTACCCTGATGGAACTGGGTATCACCCCCA
TCATCTCCTCTGGCATGGTTTTCCAGATGTGGACGGGGGATTATATACGG
ATACTTTGAAATTGCCGCCCGTGAGGGCGACATTGGATCGGGCCTCAAGG
GCCTTGTCCCGGGTAACTAGCTTCTCGCTGGTACCCACCTCATCGATGTC
AACCTGGACCTGAAGACCGACCGTGAACTGTATCAGACCGCTCAGAAGCT
CTTCGCTATCATCCTGTCCTTCGGTCAGGCCTGCGTCTACGTCCTCACTG
GTCTTTACGGCCAGCCCAGTGACCTTGGTGCCGGTATCTGTGTTCTGCTG
ATTGTTCAGCTGGTCGTTGCTGGCTTGGTTGTCATCCTGCTGGATGAGCT
GCTCCAGAAGGGCTATGGTCTTGGTAGCGGTATCTCTCTGTTCATCGCGA
CCAACATCTGCGAGTCGATCGTCTGGAAGGCTTTCTCTCCTACGACCATC
AACACTGGCCGTGGTCCCGAGTTTGAGGGTGCCATCATTGCCCTCTTCCA
CCTTCTGTTGACCTGGTCCGACAAGCAGCGCGCTCTCCGCGAGGCTTTCT
ACCGCCAGAACCTCCCCAACATCATGAACCTGCTGGCTACTCTCCTCGTT
TTCGCCGCTGTGATCTACCTCCAGGGCTTCCGTGTTGAGATCCCTGTCAA
GTCCTCCCGCCAGCGTGGCATGCGTGGTTCCTACCCTGTTCGCCTGTTCT
ACACCTCCAACATGCCCATCATGCTTCAGTCTGCTCTGTGCTCCAACATC
TTCCTCATCAGTCAGATGCTGTACTCTCGCTTCTCTGACAACCTCCTTGT
CAAGCTTCTCGGTGTTTGGGAGCCTCGTGAGGGTTCTGCCCAGCTCCACG
CCGCCTCCGGCATTGCCTACTACATGTCTCCTCCCCTGAACTTCAAGGAG
GCCCTTCTTGACCCCATTCACACCGCCGTTTACATCACCTTCATGCTGGT
TGCTTGTGCTCTCTTCTCCAAGACCTGGATTGAGGTTTCCGGCTCTGCTC
CCCGCGATGTTGCCAAGCAGCTCAAGGACCAGGGTCTCGTGATGGCTGGT
CACCGTGAGCAGAGCATGTACAAGGAGCTCAAGCGCGTCATCCCTACTGC
TGCTGCTTTCGGTGGTGCCTGCATTGGTGCCCTGTCCGTCGCTTCTGACC
TGCTTGGTGCTCTTGGCAGCGGTACTGGTATCCTCCTTGCCGTTACTTGA
CCCTATTGATCTTCCTGGTCATGAGCCAGATGCCCTTGTACGGAATTGTC
TCCTCTGACACCTCCGACCCTCTGTACTGGCTCCGTATGATGTTGGCCAG
TAACCGGGGTACCCTGATGGAACTGGGTATCACCCCCATCATCTCCTCTG
GCATGGTTTTCCAGATGTGGACGGGGGATTATATACGGATACTTTGAAAT
TGCCGCCCGTGAGGGCGACATTGGATCGGGCCTCAAGGGCCTTGTCCCGG
GTAACTAGCTTCTCGCTGGTACCCACCTCATCGATGTCAACCTGGACCTG
AAGACCGACCGTGAACTGTATCAGACCGCTCAGAAGCTCTTCGCTATCAT
CCTGTCCTTCGGTCAGGCCTGCGTCTACGTCCTCACTGGTCTTTACGGCC
AGCCCAGTGACCTTGGTGCCGGTATCTGTGTTCTGCTGATTGTTCAGCTG
GTCGTTGCTGGCTTGGTTGTCATCCTGCTGGATGAGCTGCTCCAGAAGGG
CTATGGTCTTGGTAGCGGTATCTCTCTGTTCATCGCGACCAACATCTGCG
AGTCGATCGTCTGGAAGGCTTTCTCTCCTACGACCATCAACACTGGCCGT
GGTCCCGAGTTTGAGGGTGCCATCATTGCCCTCTTCCACCTTCTGTTGAC
CTGGTCCGACAAGCAGCGCGCTCTCCGCGAGGCTTTCTACCGCCAGAACC
TCCCCAACATCATGAACCTGCTGGCTACTCTCCTCGTTTTCGCCGCTGTG
ATCTACCTCCAGGGCTTCCGTGTTGAGATCCCTGTCAAGTCCTCCCGCCA
GCGTGGCATGCGTGGTTCCTACCCTGTTCGCCTGTTCTACACCTCCAACA
TGCCCATCATGCTTCAGTCTGCTCTGTGCTCCAACATCTTCCTCATCAGT
CAGATGCTGTACTCTCGCTTCTCTGACAACCTCCTTGTCAAGCTTCTCGG
TGTTTGGGAGCCTCGTGAGGGTTCTGCCCAGCTCCACGCCGCCTCCGGCA
TTGCCTACTACATGTCTCCTCCCCTGAACTTCAAGGAGGCCCTTCTTGAC
CCCATTCACACCGCCGTTTACATCACCTTCATGCTGGTTGCTTGTGCTCT
CTTCTCCAAGACCTGGATTGAGGTTTCCGGCTCTGCTCCCCGCGATGTTG
CCAAGCAGCTCAAGGACCAGGGTCTCGTGATGGCTGGTCACCGTGAGCAG
AGCATGTACAAGGAGCTCAAGCGCGTCATCCCTACTGCTGCTGCTTTCGG
TGGTGCCTGCATTGGTGCCCTGTCCGTCGCTTCTGACCTGCTTGGTGCTC
TTGGCAGCGGTACTGGTATCCTCCTTGCCGTTACTTGACCCTATTGATCT
TCCTGGTCATGAGCCAGATGCCCTTGTACGGAATTGTCTCCTCTGACACC
TCCGACCCTCTGTACTGGCTCCGTATGATGTTGGCCAGTAACCGGGGTAC
CCTGATGGAACTGGGTATCACCCCCATCATCTCCTCTGGCATGGTTTTCC
AGATGTGGACGGGGGATTATATACGGATACTTTGAAATTGCCGCCCGTGA
GGGCGACATTGGATCGGGCCTCAAGGGCCTTGTCCCGGGTAACTAGCTTC
TCGCTGGTACCCACCTCATCGATGTCAACCTGGACCTGAAGACCGACCGT
GAACTGTATCAGACCGCTCAGAAGCTCTTCGCTATCATCCTGTCCTTCGG
TCAGGCCTGCGTCTACGTCCTCACTGGTCTTTACGGCCAGCCCAGTGACC
TTGGTGCCGGTATCTGTGTTCTGCTGATTGTTCAGCTGGTCGTTGCTGGC
TTGGTTGTCATCCTGCTGGATGAGCTGCTCCAGAAGGGCTATGGTCTTGG
TAGCGGTATCTCTCTGTTCATCGCGACCAACATCTGCGAGTCGATCGTCT
GGAAGGCTTTCTCTCCTACGACCATCAACACTGGCCGTGGTCCCGAGTTT
GAGGGTGCCATCATTGCCCTCTTCCACCTTCTGTTGACCTGGTCCGACAA
GCAGCGCGCTCTCCGCGAGGCTTTCTACCGCCAGAACCTCCCCAACATCA
TGAACCTGCTGGCTACTCTCCTCGTTTTCGCCGCTGTGATCTACCTCCAG
GGCTTCCGTGTTGAGATCCCTGTCAAGTCCTCCCGCCAGCGTGGCATGCG
TGGTTCCTACCCTGTTCGCCTGTTCTACACCTCCAACATGCCCATCATGC
TTCAGTCTGCTCTGTGCTCCAACATCTTCCTCATCAGTCAGATGCTGTAC
TCTCGCTTCTCTGACAACCTCCTTGTCAAGCTTCTCGGTGTTTGGGAGCC
TCGTGAGGGTTCTGCCCAGCTCCACGCCGCCTCCGGCATTGCCTACTACA
TGTCTCCTCCCCTGAACTTCAAGGAGGCCCTTCTTGACCCCATTCACACC
GCCGTTTACATCACCTTCATGCTGGTTGCTTGTGCTCTCTTCTCCAAGAC
CTGGATTGAGGTTTCCGGCTCTGCTCCCCGCGATGTTGCCAAGCAGCTCA
AGGACCAGGGTCTCGTGATGGCTGGTCACCGTGAGCAGAGCATGTACAAG
GAGCTCAAGCGCGTCATCCCTACTGCTGCTGCTTTCGGTGGTGCCTGCAT
TGGTGCCCTGTCCGTCGCTTCTGACCTGCTTGGTGCTCTTGGCAGCGGTA
CTGGTATCCTCCTTGCCGTTACTTGACCCTATTGATCTTCCTGGTCATGA
GCCAGATGCCCTTGTACGGAATTGTCTCCTCTGACACCTCCGACCCTCTG
TACTGGCTCCGTATGATGTTGGCCAGTAACCGGGGTACCCTGATGGAACT
GGGTATCACCCCCATCATCTCCTCTGGCATGGTTTTCCAGATGTGGACGG
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SEC61_1KJC3_008090Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T1KJC3_008090-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T1.cdsKJC3_008090-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T1.utr3p1KJC3_008090-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T1.exon4KJC3_008090-T1.exon4Aspergillus niger KJC3exon
KJC3_008090-T1.exon3KJC3_008090-T1.exon3Aspergillus niger KJC3exon
KJC3_008090-T1.exon2KJC3_008090-T1.exon2Aspergillus niger KJC3exon
KJC3_008090-T1.exon1KJC3_008090-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T1.utr5p1KJC3_008090-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR030659
DBxrefInterPro:IPR023201
DBxrefInterPro:IPR019561
DBxrefInterPro:IPR002208
DBxrefPFAM:PF00344
DBxrefPFAM:PF10559
Producttranslocon subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:943598..945811 -
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