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KJC3_008090-T2, KJC3_008090-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008090-T2
Unique NameKJC3_008090-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:943598..945811-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008090-T2 ID=KJC3_008090-T2|Name=KJC3_008090-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2214bp|location=Sequence derived from alignment at ch6:943598..945811- (Aspergillus niger KJC3)
AAAGTGGCCAGCGAGGCGACTCTCGATCGCACCCGCAATCCCCGTCGACC
TCATCGCTTCCTCCCTTTCTCCTCCATCCTCTCTCTCTTCCGTCGTCTTT
TCTTCTTCTCCTTCTCCTTTTGTACTTCCCCTCCATTCCTTCAGCTGGTT
CTCGCCTCCAGCTTTCCTTTCTTTCTTTCCCTCCCCTTTTATTCGAGTAA
TCCTGCAGCTCTGGGAGGTGCAACAGTCACAATGAGCGGACGTGAGTCTT
GCACGCGATCGCTGCCATCTCCGCGACAGCGTTCCATCCTTTACCTCAAT
GGATCAGCAAATGCTGATACTCGATTCTAGTCCGGTTTCTCGATCTCATC
AAGCCCTTCACGCCCCTCCTCCCGGAGGTGGCCGCCCCGGAAACCAAGGT
TCCCTTCAACCAGAAGTTGATGTGGACGGGGGTACGTGATACTTGTCCAG
CTCGACATGAGCTTCTAAGCTAATGGATTACCCCTGCAGTTGACCCTATT
GATCTTCCTGGTCATGAGCCAGATGCCCTTGTACGGAATTGTCTCCTCTG
ACACCTCCGACCCTCTGTACTGGCTCCGTATGATGTTGGCCAGTAACCGG
GGTACCCTGATGGAACTGGGTATCACCCCCATCATCTCCTCTGGCATGGT
TTTCCAGGTATGTAATGGGGAAATTGCAATCTGATCACGGATATCGGGCA
TTTGCTAATATGTGGCTTTTGTCTGATAGCTTCTCGCTGGTACCCACCTC
ATCGATGTCAACCTGGACCTGAAGACCGACCGTGAACTGTATCAGACCGC
TCAGAAGCTCTTCGCTATCATCCTGTCCTTCGGTCAGGCCTGCGTCTACG
TCCTCACTGGTCTTTACGGCCAGCCCAGTGACCTTGGTGCCGGTATCTGT
GTTCTGCTGATTGTTCAGCTGGTCGTTGCTGGCTTGGTTGTCATCCTGCT
GGATGAGCTGCTCCAGAAGGGCTATGGTCTTGGTAGCGGTATCTCTCTGT
TCATCGCGACCAACATCTGCGAGTCGATCGTCTGGAAGGCTTTCTCTCCT
ACGACCATCAACACTGGCCGTGGTCCCGAGTTTGAGGGTGCCATCATTGC
CCTCTTCCACCTTCTGTTGACCTGGTCCGACAAGCAGCGCGCTCTCCGCG
AGGCTTTCTACCGCCAGAACCTCCCCAACATCATGAACCTGCTGGCTACT
CTCCTCGTTTTCGCCGCTGTGATCTACCTCCAGGGCTTCCGTGTTGAGAT
CCCTGTCAAGTCCTCCCGCCAGCGTGGCATGCGTGGTTCCTACCCTGTTC
GCCTGTTCTACACCTCCAACATGCCCATCATGCTTCAGTCTGCTCTGTGC
TCCAACATCTTCCTCATCAGTCAGATGCTGTACTCTCGCTTCTCTGACAA
CCTCCTTGTCAAGCTTCTCGGTGTTTGGGAGCCTCGTGAGGGTTCTGCCC
AGCTCCACGCCGCCTCCGGCATTGCCTACTACATGTCTCCTCCCCTGAAC
TTCAAGGAGGCCCTTCTTGACCCCATTCACACCGCCGTTTACATCACCTT
CATGCTGGTTGCTTGTGCTCTCTTCTCCAAGACCTGGATTGAGGTTTCCG
GCTCTGCTCCCCGCGATGTTGCCAAGCAGCTCAAGGACCAGGGTCTCGTG
ATGGCTGGTCACCGTGAGCAGAGCATGTACAAGGAGCTCAAGCGCGTCAT
CCCTACTGCTGCTGCTTTCGGTGGTGCCTGCATTGGTGCCCTGTCCGTCG
CTTCTGACCTGCTTGGTGCTCTTGGCAGCGGTACTGGTATCCTCCTTGCC
GTTACGTAAGTCTTCACTTTGGTCTCAGATTTTCTGAAGTGGATACTAAC
ATTCAAATGCAGGATTATATACGGATACTTTGAAATTGCCGCCCGTGAGG
GCGACATTGGATCGGGCCTCAAGGGCCTTGTCCCGGGTAACTAGATAAGG
CCCCCTTTTTGATGAAAGCATGAGAAGAAGTTTGAGGGCTTATGTTTGTT
CTTGCAACTTTCTGTTTCTTCTCAGGTAGTGTGCTGTTGTGGCTGGGATC
TGGATTATTTAGTTTCTTGATGGATGTATGGCTAGTTTTAACAATTTGCA
GGAGGGGAAGATCTTCTCTACGGAGATACGTCCACGCCACAGCTGTACAT
AGCACCTACCTGGTTTGTAACCATATTGACAAAAGATCTAAAATTAACTT
AATTGGCTTGACCA
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Coding sequence (CDS) from alignment at ch6:943598..945811-

>KJC3_008090-T2 ID=KJC3_008090-T2|Name=KJC3_008090-T2|organism=Aspergillus niger KJC3|type=CDS|length=5436bp|location=Sequence derived from alignment at ch6:943598..945811- (Aspergillus niger KJC3)
CTTCTCGCTGGTACCCACCTCATCGATGTCAACCTGGACCTGAAGACCGA
CCGTGAACTGTATCAGACCGCTCAGAAGCTCTTCGCTATCATCCTGTCCT
TCGGTCAGGCCTGCGTCTACGTCCTCACTGGTCTTTACGGCCAGCCCAGT
GACCTTGGTGCCGGTATCTGTGTTCTGCTGATTGTTCAGCTGGTCGTTGC
TGGCTTGGTTGTCATCCTGCTGGATGAGCTGCTCCAGAAGGGCTATGGTC
TTGGTAGCGGTATCTCTCTGTTCATCGCGACCAACATCTGCGAGTCGATC
GTCTGGAAGGCTTTCTCTCCTACGACCATCAACACTGGCCGTGGTCCCGA
GTTTGAGGGTGCCATCATTGCCCTCTTCCACCTTCTGTTGACCTGGTCCG
ACAAGCAGCGCGCTCTCCGCGAGGCTTTCTACCGCCAGAACCTCCCCAAC
ATCATGAACCTGCTGGCTACTCTCCTCGTTTTCGCCGCTGTGATCTACCT
CCAGGGCTTCCGTGTTGAGATCCCTGTCAAGTCCTCCCGCCAGCGTGGCA
TGCGTGGTTCCTACCCTGTTCGCCTGTTCTACACCTCCAACATGCCCATC
ATGCTTCAGTCTGCTCTGTGCTCCAACATCTTCCTCATCAGTCAGATGCT
GTACTCTCGCTTCTCTGACAACCTCCTTGTCAAGCTTCTCGGTGTTTGGG
AGCCTCGTGAGGGTTCTGCCCAGCTCCACGCCGCCTCCGGCATTGCCTAC
TACATGTCTCCTCCCCTGAACTTCAAGGAGGCCCTTCTTGACCCCATTCA
CACCGCCGTTTACATCACCTTCATGCTGGTTGCTTGTGCTCTCTTCTCCA
AGACCTGGATTGAGGTTTCCGGCTCTGCTCCCCGCGATGTTGCCAAGCAG
CTCAAGGACCAGGGTCTCGTGATGGCTGGTCACCGTGAGCAGAGCATGTA
CAAGGAGCTCAAGCGCGTCATCCCTACTGCTGCTGCTTTCGGTGGTGCCT
GCATTGGTGCCCTGTCCGTCGCTTCTGACCTGCTTGGTGCTCTTGGCAGC
GGTACTGGTATCCTCCTTGCCGTTACGTAATTGACCCTATTGATCTTCCT
GGTCATGAGCCAGATGCCCTTGTACGGAATTGTCTCCTCTGACACCTCCG
ACCCTCTGTACTGGCTCCGTATGATGTTGGCCAGTAACCGGGGTACCCTG
ATGGAACTGGGTATCACCCCCATCATCTCCTCTGGCATGGTTTTCCAGTC
CGGTTTCTCGATCTCATCAAGCCCTTCACGCCCCTCCTCCCGGAGGTGGC
CGCCCCGGAAACCAAGGTTCCCTTCAACCAGAAGTTGATGTGGACGGGGA
TGAGCGGACCTTCTCGCTGGTACCCACCTCATCGATGTCAACCTGGACCT
GAAGACCGACCGTGAACTGTATCAGACCGCTCAGAAGCTCTTCGCTATCA
TCCTGTCCTTCGGTCAGGCCTGCGTCTACGTCCTCACTGGTCTTTACGGC
CAGCCCAGTGACCTTGGTGCCGGTATCTGTGTTCTGCTGATTGTTCAGCT
GGTCGTTGCTGGCTTGGTTGTCATCCTGCTGGATGAGCTGCTCCAGAAGG
GCTATGGTCTTGGTAGCGGTATCTCTCTGTTCATCGCGACCAACATCTGC
GAGTCGATCGTCTGGAAGGCTTTCTCTCCTACGACCATCAACACTGGCCG
TGGTCCCGAGTTTGAGGGTGCCATCATTGCCCTCTTCCACCTTCTGTTGA
CCTGGTCCGACAAGCAGCGCGCTCTCCGCGAGGCTTTCTACCGCCAGAAC
CTCCCCAACATCATGAACCTGCTGGCTACTCTCCTCGTTTTCGCCGCTGT
GATCTACCTCCAGGGCTTCCGTGTTGAGATCCCTGTCAAGTCCTCCCGCC
AGCGTGGCATGCGTGGTTCCTACCCTGTTCGCCTGTTCTACACCTCCAAC
ATGCCCATCATGCTTCAGTCTGCTCTGTGCTCCAACATCTTCCTCATCAG
TCAGATGCTGTACTCTCGCTTCTCTGACAACCTCCTTGTCAAGCTTCTCG
GTGTTTGGGAGCCTCGTGAGGGTTCTGCCCAGCTCCACGCCGCCTCCGGC
ATTGCCTACTACATGTCTCCTCCCCTGAACTTCAAGGAGGCCCTTCTTGA
CCCCATTCACACCGCCGTTTACATCACCTTCATGCTGGTTGCTTGTGCTC
TCTTCTCCAAGACCTGGATTGAGGTTTCCGGCTCTGCTCCCCGCGATGTT
GCCAAGCAGCTCAAGGACCAGGGTCTCGTGATGGCTGGTCACCGTGAGCA
GAGCATGTACAAGGAGCTCAAGCGCGTCATCCCTACTGCTGCTGCTTTCG
GTGGTGCCTGCATTGGTGCCCTGTCCGTCGCTTCTGACCTGCTTGGTGCT
CTTGGCAGCGGTACTGGTATCCTCCTTGCCGTTACGTAATTGACCCTATT
GATCTTCCTGGTCATGAGCCAGATGCCCTTGTACGGAATTGTCTCCTCTG
ACACCTCCGACCCTCTGTACTGGCTCCGTATGATGTTGGCCAGTAACCGG
GGTACCCTGATGGAACTGGGTATCACCCCCATCATCTCCTCTGGCATGGT
TTTCCAGTCCGGTTTCTCGATCTCATCAAGCCCTTCACGCCCCTCCTCCC
GGAGGTGGCCGCCCCGGAAACCAAGGTTCCCTTCAACCAGAAGTTGATGT
GGACGGGGATGAGCGGACCTTCTCGCTGGTACCCACCTCATCGATGTCAA
CCTGGACCTGAAGACCGACCGTGAACTGTATCAGACCGCTCAGAAGCTCT
TCGCTATCATCCTGTCCTTCGGTCAGGCCTGCGTCTACGTCCTCACTGGT
CTTTACGGCCAGCCCAGTGACCTTGGTGCCGGTATCTGTGTTCTGCTGAT
TGTTCAGCTGGTCGTTGCTGGCTTGGTTGTCATCCTGCTGGATGAGCTGC
TCCAGAAGGGCTATGGTCTTGGTAGCGGTATCTCTCTGTTCATCGCGACC
AACATCTGCGAGTCGATCGTCTGGAAGGCTTTCTCTCCTACGACCATCAA
CACTGGCCGTGGTCCCGAGTTTGAGGGTGCCATCATTGCCCTCTTCCACC
TTCTGTTGACCTGGTCCGACAAGCAGCGCGCTCTCCGCGAGGCTTTCTAC
CGCCAGAACCTCCCCAACATCATGAACCTGCTGGCTACTCTCCTCGTTTT
CGCCGCTGTGATCTACCTCCAGGGCTTCCGTGTTGAGATCCCTGTCAAGT
CCTCCCGCCAGCGTGGCATGCGTGGTTCCTACCCTGTTCGCCTGTTCTAC
ACCTCCAACATGCCCATCATGCTTCAGTCTGCTCTGTGCTCCAACATCTT
CCTCATCAGTCAGATGCTGTACTCTCGCTTCTCTGACAACCTCCTTGTCA
AGCTTCTCGGTGTTTGGGAGCCTCGTGAGGGTTCTGCCCAGCTCCACGCC
GCCTCCGGCATTGCCTACTACATGTCTCCTCCCCTGAACTTCAAGGAGGC
CCTTCTTGACCCCATTCACACCGCCGTTTACATCACCTTCATGCTGGTTG
CTTGTGCTCTCTTCTCCAAGACCTGGATTGAGGTTTCCGGCTCTGCTCCC
CGCGATGTTGCCAAGCAGCTCAAGGACCAGGGTCTCGTGATGGCTGGTCA
CCGTGAGCAGAGCATGTACAAGGAGCTCAAGCGCGTCATCCCTACTGCTG
CTGCTTTCGGTGGTGCCTGCATTGGTGCCCTGTCCGTCGCTTCTGACCTG
CTTGGTGCTCTTGGCAGCGGTACTGGTATCCTCCTTGCCGTTACGTAATT
GACCCTATTGATCTTCCTGGTCATGAGCCAGATGCCCTTGTACGGAATTG
TCTCCTCTGACACCTCCGACCCTCTGTACTGGCTCCGTATGATGTTGGCC
AGTAACCGGGGTACCCTGATGGAACTGGGTATCACCCCCATCATCTCCTC
TGGCATGGTTTTCCAGTCCGGTTTCTCGATCTCATCAAGCCCTTCACGCC
CCTCCTCCCGGAGGTGGCCGCCCCGGAAACCAAGGTTCCCTTCAACCAGA
AGTTGATGTGGACGGGGATGAGCGGACCTTCTCGCTGGTACCCACCTCAT
CGATGTCAACCTGGACCTGAAGACCGACCGTGAACTGTATCAGACCGCTC
AGAAGCTCTTCGCTATCATCCTGTCCTTCGGTCAGGCCTGCGTCTACGTC
CTCACTGGTCTTTACGGCCAGCCCAGTGACCTTGGTGCCGGTATCTGTGT
TCTGCTGATTGTTCAGCTGGTCGTTGCTGGCTTGGTTGTCATCCTGCTGG
ATGAGCTGCTCCAGAAGGGCTATGGTCTTGGTAGCGGTATCTCTCTGTTC
ATCGCGACCAACATCTGCGAGTCGATCGTCTGGAAGGCTTTCTCTCCTAC
GACCATCAACACTGGCCGTGGTCCCGAGTTTGAGGGTGCCATCATTGCCC
TCTTCCACCTTCTGTTGACCTGGTCCGACAAGCAGCGCGCTCTCCGCGAG
GCTTTCTACCGCCAGAACCTCCCCAACATCATGAACCTGCTGGCTACTCT
CCTCGTTTTCGCCGCTGTGATCTACCTCCAGGGCTTCCGTGTTGAGATCC
CTGTCAAGTCCTCCCGCCAGCGTGGCATGCGTGGTTCCTACCCTGTTCGC
CTGTTCTACACCTCCAACATGCCCATCATGCTTCAGTCTGCTCTGTGCTC
CAACATCTTCCTCATCAGTCAGATGCTGTACTCTCGCTTCTCTGACAACC
TCCTTGTCAAGCTTCTCGGTGTTTGGGAGCCTCGTGAGGGTTCTGCCCAG
CTCCACGCCGCCTCCGGCATTGCCTACTACATGTCTCCTCCCCTGAACTT
CAAGGAGGCCCTTCTTGACCCCATTCACACCGCCGTTTACATCACCTTCA
TGCTGGTTGCTTGTGCTCTCTTCTCCAAGACCTGGATTGAGGTTTCCGGC
TCTGCTCCCCGCGATGTTGCCAAGCAGCTCAAGGACCAGGGTCTCGTGAT
GGCTGGTCACCGTGAGCAGAGCATGTACAAGGAGCTCAAGCGCGTCATCC
CTACTGCTGCTGCTTTCGGTGGTGCCTGCATTGGTGCCCTGTCCGTCGCT
TCTGACCTGCTTGGTGCTCTTGGCAGCGGTACTGGTATCCTCCTTGCCGT
TACGTAATTGACCCTATTGATCTTCCTGGTCATGAGCCAGATGCCCTTGT
ACGGAATTGTCTCCTCTGACACCTCCGACCCTCTGTACTGGCTCCGTATG
ATGTTGGCCAGTAACCGGGGTACCCTGATGGAACTGGGTATCACCCCCAT
CATCTCCTCTGGCATGGTTTTCCAGTCCGGTTTCTCGATCTCATCAAGCC
CTTCACGCCCCTCCTCCCGGAGGTGGCCGCCCCGGAAACCAAGGTTCCCT
TCAACCAGAAGTTGATGTGGACGGGGATGAGCGGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SEC61_1KJC3_008090Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T2KJC3_008090-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T2.cdsKJC3_008090-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T2.utr3p1KJC3_008090-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T2.exon4KJC3_008090-T2.exon4Aspergillus niger KJC3exon
KJC3_008090-T2.exon3KJC3_008090-T2.exon3Aspergillus niger KJC3exon
KJC3_008090-T2.exon2KJC3_008090-T2.exon2Aspergillus niger KJC3exon
KJC3_008090-T2.exon1KJC3_008090-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008090-T2.utr5p1KJC3_008090-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR030659
DBxrefInterPro:IPR019561
DBxrefInterPro:IPR023201
DBxrefInterPro:IPR002208
DBxrefPFAM:PF00344
DBxrefPFAM:PF10559
Product variant 2
Producttranslocon subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:943598..945811 -
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