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KJC3_008103-T1, KJC3_008103-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008103-T1
Unique NameKJC3_008103-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:979640..981973-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008103-T1 ID=KJC3_008103-T1|Name=KJC3_008103-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2334bp|location=Sequence derived from alignment at ch6:979640..981973- (Aspergillus niger KJC3)
TCTTGCTATACATAAGTGAATGCCTCTAACTCGGATAATCGGCTGTATTA
TCTGCGTCCTGGTTGGATATGCGTCCATGCAACCATTCGATCCCTCGACC
GTTGCGGAGTAGAGCAAGATTAATCCCTGTCCTTCTTCATCCAATAATTA
TGGTTTTCTCGAATACCTGCTGTTCCTAATAGCCCTGTGCTACCTGCTGA
CAGGGGTTGGGCAAGTAATGGTCAGTATCCCAGACACTGTAGGGGTATAA
TGACCCACATGGACTGTGGCCACTCTCGGCCAGGTATTTAGAAGGCCCTT
GAGCCTATATAACCTGGCCTGCAGTCTCGTTTGACTCACTCTTACTTCCT
AAAGAGCAAGTACAATGCCTTTTCTGCGGTGGCCTCCAGGCCAGAAAATC
ATGATCACACCTACCACTCCTTTCCGAGCTGCCAGAACTCTGGCATTCGG
TGGACGGATACTATCGCCCAAAAAGTCATCCTCGTTCGTATACCCTACAG
TTGATACAAACTCCCATGATGCTAATGGTAAATCTAAACGTGTCAATATA
GTCGTCTTCTCTCCTCAACTGCACATAGTTATGCCGACGAAACACTGAAC
AAAGTCTCCTCTAAGATCACACAACCCAAGTCCCAGGGTGCATCTCAAGC
GATGCTTTACGCGACCGGCTTGACGGAGAAAGACATGTCCAAGGCACAGG
TTGGAATTTCATCAGTGTGGTTCGAAGGGAATCCTTGTAACATGCACTTG
ATGGATTTGTCGTCGCTGGTTCGCGAGTCGGTAGCCAAAGCTGGCCTGGT
TCCCATGCGTTTCAACTCCATCGGCGCCTCTGATGGCATTAGTATGGGCA
CATCTGGCATGCGATTCAGTTTACAGAGCCGAGAGATCATTGCTGATGGA
ATTGAAACGGTCATGAATGCCCAGTGGTATGATGCTAATATCTCGTTGCC
TGGCTGTGATAAGAACATGCCAGGTGTGCTGATGGCTATGGGTCGGGTCA
ACCGTCCGAGTATCATGGTGTATGGTGGTAGTATCAAGCCCGGCTGCAGT
GCGGGGGGTAAGCCACTTGACTTGGTCAGCGCCTTTCAATCGTATGGCCA
ATATCTCACTGGTGAGATCGACGAGAAGGAACGATTTGATATTATCCGAC
ACGCTTGCCCAGGTGCTGGTGCCTGTGGGGGTATGTATACGGCTAATACA
CTGGCAACGGCCATCGAGACCCTCGGAATGACGGTCCCTGGAAGCAGCAG
TACACCGGCAGAGGATCCGAGGAAGCTGGCAGAGTGTGAGGACATCGGTC
AGACGGTGAAGAATCTGCTGAAGGAGGACATCCGTCCCAAGGATATCATG
ACACGGCAGGCATTTGAAAATGCTATGATTGTTGTGAATATTCTTGGAGG
CAGCACCAATGCAGTGCTGCACTTGATTGCTATCGCTAATTCCGTTGGGA
TCAAATTGACTATCGATGACTTCCAGGCTGTGTCAGACAAGACACCTTTC
TTAGCTGATCTAAAGCCTTCCGGCAAGTATGTCATGCATGACCTGTACAA
AGTCGGGGGCACGCCTGCACTGCTGAAGTTCCTGCTCAGGGAAGGCCTTA
TTGACGGCTCCGGCGTCACTGTTACTGGCAAAACCATGAAAGAGAATGTA
GCCTCATGGCCCGAATTTTCACCTGAGCAGCCCATCATCCGCCCTCTAAG
CAATCCCATCAAGCCAACCGGCCACTTGCAGATCCTTCGTGGGTCATTGG
CCCCCGGCGGCTCGGTTGGAAAAATCACCGGCAAAGAAGGTCTACGGTTC
GAAGGTCTTGCTAAATGTTACGACTTTGAGGACGCTTTCATTGAGGCTCT
CGAACGAGGCGAGATCAAGAAGGGCGAGAAAACGGTCGTTATTATTCGAT
ATGAAGGGCCCAAAGGCGGCCCCGGGATGCCTGAGATGCTCAAGCCCAGC
TCAGCTATCATGGGCGCGGGATTGGGTCAGGATGTTGCGCTACTCACTGA
TGGAAGATTCTCTGGAGGTAGTCATGGCTTTTTAATTGGGCATGTTGTGC
CTGAGGCTATGGAGGGTGGGCCCATTGCCCTGGTGAAGGATGGCGATCGG
ATCGTAATTGATGCGGAGCAAAGAGTGGTTGACCTGCTGATCACCCCAGA
AGAAATGGCAAAGAGAAGAGTGTCTTGGACAGCACCGGCACCTCGGGCGA
AGAAGGGGACATTAAGCAAGTATGCGAAGCTGGTGAGCGATGCGAGCCAT
GGGTGCGTGACGGATGGTCCAATATAGAACTAGAGGTTAGTTTATCTCTG
ATGGCAAGCTTTTCCAATGCAGAATTTTTGGACC
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Coding sequence (CDS) from alignment at ch6:979640..981973-

>KJC3_008103-T1 ID=KJC3_008103-T1|Name=KJC3_008103-T1|organism=Aspergillus niger KJC3|type=CDS|length=3690bp|location=Sequence derived from alignment at ch6:979640..981973- (Aspergillus niger KJC3)
TCGTCTTCTCTCCTCAACTGCACATAGTTATGCCGACGAAACACTGAACA
AAGTCTCCTCTAAGATCACACAACCCAAGTCCCAGGGTGCATCTCAAGCG
ATGCTTTACGCGACCGGCTTGACGGAGAAAGACATGTCCAAGGCACAGGT
TGGAATTTCATCAGTGTGGTTCGAAGGGAATCCTTGTAACATGCACTTGA
TGGATTTGTCGTCGCTGGTTCGCGAGTCGGTAGCCAAAGCTGGCCTGGTT
CCCATGCGTTTCAACTCCATCGGCGCCTCTGATGGCATTAGTATGGGCAC
ATCTGGCATGCGATTCAGTTTACAGAGCCGAGAGATCATTGCTGATGGAA
TTGAAACGGTCATGAATGCCCAGTGGTATGATGCTAATATCTCGTTGCCT
GGCTGTGATAAGAACATGCCAGGTGTGCTGATGGCTATGGGTCGGGTCAA
CCGTCCGAGTATCATGGTGTATGGTGGTAGTATCAAGCCCGGCTGCAGTG
CGGGGGGTAAGCCACTTGACTTGGTCAGCGCCTTTCAATCGTATGGCCAA
TATCTCACTGGTGAGATCGACGAGAAGGAACGATTTGATATTATCCGACA
CGCTTGCCCAGGTGCTGGTGCCTGTGGGGGTATGTATACGGCTAATACAC
TGGCAACGGCCATCGAGACCCTCGGAATGACGGTCCCTGGAAGCAGCAGT
ACACCGGCAGAGGATCCGAGGAAGCTGGCAGAGTGTGAGGACATCGGTCA
GACGGTGAAGAATCTGCTGAAGGAGGACATCCGTCCCAAGGATATCATGA
CACGGCAGGCATTTGAAAATGCTATGATTGTTGTGAATATTCTTGGAGGC
AGCACCAATGCAGTGCTGCACTTGATTGCTATCGCTAATTCCGTTGGGAT
CAAATTGACTATCGATGACTTCCAGGCTGTGTCAGACAAGACACCTTTCT
TAGCTGATCTAAAGCCTTCCGGCAAGTATGTCATGCATGACCTGTACAAA
GTCGGGGGCACGCCTGCACTGCTGAAGTTCCTGCTCAGGGAAGGCCTTAT
TGACGGCTCCGGCGTCACTGTTACTGGCAAAACCATGAAAGAGAATGTAG
CCTCATGGCCCGAATTTTCACCTGAGCAGCCCATCATCCGCCCTCTAAGC
AATCCCATCAAGCCAACCGGCCACTTGCAGATCCTTCGTGGGTCATTGGC
CCCCGGCGGCTCGGTTGGAAAAATCACCGGCAAAGAAGGTCTACGGTTCG
AAGGTCTTGCTAAATGTTACGACTTTGAGGACGCTTTCATTGAGGCTCTC
GAACGAGGCGAGATCAAGAAGGGCGAGAAAACGGTCGTTATTATTCGATA
TGAAGGGCCCAAAGGCGGCCCCGGGATGCCTGAGATGCTCAAGCCCAGCT
CAGCTATCATGGGCGCGGGATTGGGTCAGGATGTTGCGCTACTCACTGAT
GGAAGATTCTCTGGAGGTAGTCATGGCTTTTTAATTGGGCATGTTGTGCC
TGAGGCTATGGAGGGTGGGCCCATTGCCCTGGTGAAGGATGGCGATCGGA
TCGTAATTGATGCGGAGCAAAGAGTGGTTGACCTGCTGATCACCCCAGAA
GAAATGGCAAAGAGAAGAGTGTCTTGGACAGCACCGGCACCTCGGGCGAA
GAAGGGGACATTAAGCAAGTATGCGAAGCTGGTGAGCGATGCGAGCCATG
GGTGCGTGACGGATGGTCCAATATAGATGCCTTTTCTGCGGTGGCCTCCA
GGCCAGAAAATCATGATCACACCTACCACTCCTTTCCGAGCTGCCAGAAC
TCTGGCATTCGGTGGACGGATACTATCGCCCAAAAAGTCATCCTCTCGTC
TTCTCTCCTCAACTGCACATAGTTATGCCGACGAAACACTGAACAAAGTC
TCCTCTAAGATCACACAACCCAAGTCCCAGGGTGCATCTCAAGCGATGCT
TTACGCGACCGGCTTGACGGAGAAAGACATGTCCAAGGCACAGGTTGGAA
TTTCATCAGTGTGGTTCGAAGGGAATCCTTGTAACATGCACTTGATGGAT
TTGTCGTCGCTGGTTCGCGAGTCGGTAGCCAAAGCTGGCCTGGTTCCCAT
GCGTTTCAACTCCATCGGCGCCTCTGATGGCATTAGTATGGGCACATCTG
GCATGCGATTCAGTTTACAGAGCCGAGAGATCATTGCTGATGGAATTGAA
ACGGTCATGAATGCCCAGTGGTATGATGCTAATATCTCGTTGCCTGGCTG
TGATAAGAACATGCCAGGTGTGCTGATGGCTATGGGTCGGGTCAACCGTC
CGAGTATCATGGTGTATGGTGGTAGTATCAAGCCCGGCTGCAGTGCGGGG
GGTAAGCCACTTGACTTGGTCAGCGCCTTTCAATCGTATGGCCAATATCT
CACTGGTGAGATCGACGAGAAGGAACGATTTGATATTATCCGACACGCTT
GCCCAGGTGCTGGTGCCTGTGGGGGTATGTATACGGCTAATACACTGGCA
ACGGCCATCGAGACCCTCGGAATGACGGTCCCTGGAAGCAGCAGTACACC
GGCAGAGGATCCGAGGAAGCTGGCAGAGTGTGAGGACATCGGTCAGACGG
TGAAGAATCTGCTGAAGGAGGACATCCGTCCCAAGGATATCATGACACGG
CAGGCATTTGAAAATGCTATGATTGTTGTGAATATTCTTGGAGGCAGCAC
CAATGCAGTGCTGCACTTGATTGCTATCGCTAATTCCGTTGGGATCAAAT
TGACTATCGATGACTTCCAGGCTGTGTCAGACAAGACACCTTTCTTAGCT
GATCTAAAGCCTTCCGGCAAGTATGTCATGCATGACCTGTACAAAGTCGG
GGGCACGCCTGCACTGCTGAAGTTCCTGCTCAGGGAAGGCCTTATTGACG
GCTCCGGCGTCACTGTTACTGGCAAAACCATGAAAGAGAATGTAGCCTCA
TGGCCCGAATTTTCACCTGAGCAGCCCATCATCCGCCCTCTAAGCAATCC
CATCAAGCCAACCGGCCACTTGCAGATCCTTCGTGGGTCATTGGCCCCCG
GCGGCTCGGTTGGAAAAATCACCGGCAAAGAAGGTCTACGGTTCGAAGGT
CTTGCTAAATGTTACGACTTTGAGGACGCTTTCATTGAGGCTCTCGAACG
AGGCGAGATCAAGAAGGGCGAGAAAACGGTCGTTATTATTCGATATGAAG
GGCCCAAAGGCGGCCCCGGGATGCCTGAGATGCTCAAGCCCAGCTCAGCT
ATCATGGGCGCGGGATTGGGTCAGGATGTTGCGCTACTCACTGATGGAAG
ATTCTCTGGAGGTAGTCATGGCTTTTTAATTGGGCATGTTGTGCCTGAGG
CTATGGAGGGTGGGCCCATTGCCCTGGTGAAGGATGGCGATCGGATCGTA
ATTGATGCGGAGCAAAGAGTGGTTGACCTGCTGATCACCCCAGAAGAAAT
GGCAAAGAGAAGAGTGTCTTGGACAGCACCGGCACCTCGGGCGAAGAAGG
GGACATTAAGCAAGTATGCGAAGCTGGTGAGCGATGCGAGCCATGGGTGC
GTGACGGATGGTCCAATATAGATGCCTTTTCTGCGGTGGCCTCCAGGCCA
GAAAATCATGATCACACCTACCACTCCTTTCCGAGCTGCCAGAACTCTGG
CATTCGGTGGACGGATACTATCGCCCAAAAAGTCATCCTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004160dihydroxy-acid dehydratase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008103KJC3_008103Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008103-T1KJC3_008103-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008103-T1.cdsKJC3_008103-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008103-T1.utr3p1KJC3_008103-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008103-T1.exon3KJC3_008103-T1.exon3Aspergillus niger KJC3exon
KJC3_008103-T1.exon2KJC3_008103-T1.exon2Aspergillus niger KJC3exon
KJC3_008103-T1.exon1KJC3_008103-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008103-T1.utr5p2KJC3_008103-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008103-T1.utr5p1KJC3_008103-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037237
DBxrefInterPro:IPR020558
DBxrefInterPro:IPR042096
DBxrefInterPro:IPR004404
DBxrefInterPro:IPR000581
DBxrefPFAM:PF00920
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:979640..981973 -
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