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KJC3_008108-T1, KJC3_008108-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008108-T1
Unique NameKJC3_008108-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:992676..994623+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008108-T1 ID=KJC3_008108-T1|Name=KJC3_008108-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1948bp|location=Sequence derived from alignment at ch6:992676..994623+ (Aspergillus niger KJC3)
CCTTCATTCAGCTTTCTACTGTCCATCCATCAATTCCCACTACGCACCTG
TCCACAGTGCGAATTTTGATACTACTCGATTGTTATTTTCAGTTTTCAGT
TCCGACAAAAGACCCTCCCCAACTGTTCGAGATGGACCGCAGTTTGGACG
AGATTATCGCGGAGCGTCCTGTAAGGTCCCTGCTAACGCCTCCGGGATGA
CAAGTCTCAGCTGGTCTGCTAGACACCACACCCTGCATGTGCGCTGACTT
GGTTTCGTGTATCAGAAGCAGAATCAGAACCGCGGCCGTCGCCCCCCTCA
AGGTCGTCGCCGTGATGGCGTAAGAAAGGTATTTCCTCATCCCTGTCATC
ATCTCATCGTGAGCTGCTGCTGTTTCTTGCGTCTGTTTTGCGCGTGTCGA
TGCTAACCAGTGCATTGCTTCCCGCAGGTCCTCCCTCCTTGTCTCCTTTC
GAGCATTGCTCGCGCATCGTGATAAGCAAATTTCGCTGGCCTCGTAGCAT
CGTCTCTTGCACAGGCAGACCGCCGCGAAGAGCCGCAGAAAGATGGAGCT
GTTTACGTGATACCTAGTGTGACTTCGAGCTGACCTTCTCTCTCTACTCG
ACTACAACAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTGTAATTAC
CTTTCCCCCCTATTGCTTTCTGTCCAGTCCTACAGCCCGAATGATGGGAT
CGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAAGTACGAA
GACGACAGAGATGGTGCGTTATACGACTCTCAATATGGCGAATAGCCATG
GGAAATCATCCATGATCGGTCATTCTTAACACCTTACTCAGCACGCCCTT
CTCGTGCCCCCCGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAA
CAGTATGTTTATCCAGTGGCGCTTCGGTGAACGAAGCTGACCTGTACAGA
CACAGCACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTA
CGACATTACAGAAACCGATCTCGAGGTAGGCCTCATTCCAGTCCCCGCGT
TTTTTCCTACTGAGCTCTGACATATGCAATGTAAAAGGACCTGTTCACCC
GCATCGGACCAATCAGTAATGTTTCTCTCGTTTACGACCGGGCAGGACGT
TCCGAAGGAGTCGCCTTTGTGACCTACACTCATATCGGCGATGCGCGAAC
CGCGATTAGAGAATTCGACGGCGCAAACGCCAAAGGCCAGCCTATTCGTT
TAACACTGATCTCTACCGGTGCCGGAAGACGCGACCGCAACCCATTTGAC
AACGTGGAACGCTCGAAGGGAAGTCTATTTGACCGCGTCGAGAGACCCCG
TGACCGCGACGCACGGAGTCTCAGCCCCGGTAGTAGGAGCGGCAGTCCTG
ATGGAGGTGCACGCCGCCGTCGTGGTCGTCGCGGTGGTGGCGGCGGCGGG
TACCGGCGCAGTGACGTCTCCAAACCGGCTCCCGAGCACATTGACAGATA
CATTCCTGGTCAGCGGTCGCCGACTCGCAACCGCGGCGCTACGAACGGGC
GCCGCCAAGGCGGTGGAGGTGAGAACAAGGGCGACAGCCGTCGCATGGTT
AACGGACGGCCCAGAAAGACACAGGAAGAGCTCGATCAAGAAATGGACGA
TTACTGGGGTGGCTCCGGCAACGCTGGTGCCGGCGCAGCTGATAAAGAAG
TTGTCCCTGACGAGCCTCAGCAGATTGCACCGGCGTCTGCGGCCGCTGCT
GGTGATGATGATATCGACATGATTGAGTGAGGGACTCATTTCGATTGGAA
TCTTCTAGTCTGACATTCACGCCCACTTGCGAGGGCTTTTTGATGGCTTT
GCCTTCTTTTCATCACATGTAACTAGTATCAATACGGGTTGGAATACAAA
AGACGTCTGGAATAATAAAGCCAAACGATTCAAAGACGTACAGATGAC
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Coding sequence (CDS) from alignment at ch6:992676..994623+

>KJC3_008108-T1 ID=KJC3_008108-T1|Name=KJC3_008108-T1|organism=Aspergillus niger KJC3|type=CDS|length=7014bp|location=Sequence derived from alignment at ch6:992676..994623+ (Aspergillus niger KJC3)
ATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCAGAATCA
GAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCGTAAGAA
AGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTTCATGAC
AAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCC
GCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTA
GCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACC
GATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCT
CGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACA
CTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAAC
GCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAG
ACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTAT
TTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCC
GGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCG
TCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGG
CTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGC
AACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAA
GGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAG
AGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGT
GCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGC
ACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGT
GAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCAGAAT
CAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCGTAAG
AAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTTCATG
ACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGT
CCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATC
TAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAA
CCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCT
CTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTA
CACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAA
ACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGA
AGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCT
ATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCC
CCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGT
CGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACC
GGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTC
GCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAAC
AAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGA
AGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTG
GTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATT
GCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGA
GTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCAGA
ATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCGTA
AGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTTCA
TGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGAC
GTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCA
TCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGA
AACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTT
CTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACC
TACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGC
AAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCG
GAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGT
CTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAG
CCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTG
GTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAA
CCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGAC
TCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGA
ACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAG
GAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGC
TGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGA
TTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATT
GAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAGCA
GAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGGCG
TAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGGTT
CATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCG
ACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTG
CATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACA
GAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGT
TTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGA
CCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGC
GCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGC
CGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAA
GTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTC
AGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCG
TGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCA
AACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCG
ACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGA
GAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACAC
AGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAAC
GCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCA
GATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGA
TTGAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTAAG
CAGAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGATGG
CGTAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTGGG
TTCATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCC
CGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCAC
TGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTA
CAGAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAAT
GTTTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGT
GACCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACG
GCGCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGT
GCCGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGG
AAGTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTC
TCAGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGT
CGTGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTC
CAAACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGC
CGACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGT
GAGAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGAC
ACAGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCA
ACGCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAG
CAGATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACAT
GATTGAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCCTA
AGCAGAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTGAT
GGCGTAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGACTG
GGTTCATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCC
CCCGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGC
ACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGACAT
TACAGAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTA
ATGTTTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTT
GTGACCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGA
CGGCGCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCG
GTGCCGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAG
GGAAGTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAG
TCTCAGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCC
GTCGTGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTC
TCCAAACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTC
GCCGACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAG
GTGAGAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAG
ACACAGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGG
CAACGCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTC
AGCAGATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGAC
ATGATTGAGTGAATGGACCGCAGTTTGGACGAGATTATCGCGGAGCGTCC
TAAGCAGAATCAGAACCGCGGCCGTCGCCCCCCTCAAGGTCGTCGCCGTG
ATGGCGTAAGAAAGCCTCACAGAGAAGAACGTCCTGATTTGGATCTTGAC
TGGGTTCATGACAAGTACGAAGACGACAGAGATGCACGCCCTTCTCGTGC
CCCCCGACGTCCGCGTGGCGACCGCTACTCCCCCTCTCCCGAACAACACA
GCACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACATCCATTACGAC
ATTACAGAAACCGATCTCGAGGACCTGTTCACCCGCATCGGACCAATCAG
TAATGTTTCTCTCGTTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCT
TTGTGACCTACACTCATATCGGCGATGCGCGAACCGCGATTAGAGAATTC
GACGGCGCAAACGCCAAAGGCCAGCCTATTCGTTTAACACTGATCTCTAC
CGGTGCCGGAAGACGCGACCGCAACCCATTTGACAACGTGGAACGCTCGA
AGGGAAGTCTATTTGACCGCGTCGAGAGACCCCGTGACCGCGACGCACGG
AGTCTCAGCCCCGGTAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCG
CCGTCGTGGTCGTCGCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACG
TCTCCAAACCGGCTCCCGAGCACATTGACAGATACATTCCTGGTCAGCGG
TCGCCGACTCGCAACCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGG
AGGTGAGAACAAGGGCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAA
AGACACAGGAAGAGCTCGATCAAGAAATGGACGATTACTGGGGTGGCTCC
GGCAACGCTGGTGCCGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCC
TCAGCAGATTGCACCGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCG
ACATGATTGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008108KJC3_008108Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008108-T1KJC3_008108-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008108-T1.utr5p1KJC3_008108-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008108-T1.exon1KJC3_008108-T1.exon1Aspergillus niger KJC3exon
KJC3_008108-T1.exon2KJC3_008108-T1.exon2Aspergillus niger KJC3exon
KJC3_008108-T1.exon3KJC3_008108-T1.exon3Aspergillus niger KJC3exon
KJC3_008108-T1.exon4KJC3_008108-T1.exon4Aspergillus niger KJC3exon
KJC3_008108-T1.exon5KJC3_008108-T1.exon5Aspergillus niger KJC3exon
KJC3_008108-T1.exon6KJC3_008108-T1.exon6Aspergillus niger KJC3exon
KJC3_008108-T1.exon7KJC3_008108-T1.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008108-T1.cdsKJC3_008108-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008108-T1.utr3p1KJC3_008108-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR025715
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF13865
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:992676..994623 +
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