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KJC3_008109-T2, KJC3_008109-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008109-T2
Unique NameKJC3_008109-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:994671..996629-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008109-T2 ID=KJC3_008109-T2|Name=KJC3_008109-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1959bp|location=Sequence derived from alignment at ch6:994671..996629- (Aspergillus niger KJC3)
CCGGCTTCATCTCCATCGTTCTCGTTGTTTCGGGCTTGAGTCCCTCTCCA
CCGTGTCTGTAGAAGCGCTGGTGGCCCATTCATCTGTTCGAGGGTTTCGC
CTTATACTGGGAGACCCGAATCCTCCACCTAATTCCTTGTCCTGCCTTTC
CTTTCTTCCACCTCCAATCATTCTAGAACGACCCCGCTACCTCGGGCTGA
TTGATGACTTGACGAGACTGACGAATTTCCTTGTGTACTTCTACGCTCTG
TTCATCTCTCGTGTCTCCTAGTTCACTGCTGCTTTACGCTTCATCCGCGA
CAGTTCAGAGACGGTTTCTTTCAGTCTCAACTGAACACCTTTATCGTCAC
TTCACATTACGGCCGCTACTATCGAATGCGACATTGTTCTTTTTGCAATT
GACTCTGTACATTACCTCAACTGAAGTCTATACAATGGCGTCAGGTGCGA
TGGATGCAGTGGCTCATTTTTCGAAGCAAACGACTGTTGACACATTCCAG
ACATCCCCAAAGTTGTGCCGTTGACCTGCCACGGACACTCACGTCCCGTG
CCGCATATCAACTTCTCATCCACTGTCGAGGATGATCAGTACTACCTAAT
CTCTGCCTGCAAAGGTGAATATCCTCAGATCTACGGTTATAATTTCCGTG
CTAACATCCACCAGACAACAATCCCATGTTGCGTGATGGTATAACAGGTG
ACTGGTGCGCGTTCCCCGCATTGCATACTCCGCACACCGCACATGCTTAC
CATAAATGCCATTCAGGATTGGAACCTTCCTCGGCCACAAGGGCGCGGTA
TGGCAAGCCCGTCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGC
GGACTTCTCCGCGTGAGTACCTACCTACCCACCTTCAACGCACATCGCCG
TCGCATCTCACTGACCTGCGATTTCTCTCTCCATACAACAGCAAAATCTG
GGACACTCACACTGGCGAATGCAAACACACCCTCCAGCACTCGCACATCT
GTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACA
GGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGG
CAGTAACAGCTCCTCACCGACAAGTGCCACCCCCAACAACGACGCCAGTC
CTTCCGCGGTAACAAGCTACGAGATTGGCCCCGGGGTTCACGGCGGCACC
ATCAAATCGATTGTCTGGAATCAGGACTACAACATCCTTACGACCGCCGC
GGAAGACCGCAAAATCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCG
TCGAATACGCCGTAGAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTC
GCCGTCAGACCTAACGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATC
CGTTTATCTATTCGACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCG
ATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGG
TTGGTCACAGGTAGTGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCG
CACGGAGGAAGAGCTGGGTACGTTTCATCCCCATTTCAACCCCACATTAT
CCATTGCTGTTCACTTCGATGTGGCTAACAATCCACCGCAGAGGTTCAAA
AAGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCCTGACGGCAAA
CTGTATGGTACAGGAAGCGAGGATGGAACGATCAAGTTGTGGAAGGCTTG
CAGGGAGCCGTATGGCCTCTGGCGGTGATGGAACGAAGAGCGGGAGGCCA
TCTACTCACATATTGATATGTACAAAAACGACAAATAACACGAAAGCGAT
CCTTCCATCTGCCGAGCTGTGGTGGCACGGATCTGCTTATACACTACGCA
GTTGCGGCTGCACACTTCTAACCTTGAGATAAGATATTCGCAATATAGAC
ACCCATGGC
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Coding sequence (CDS) from alignment at ch6:994671..996629-

>KJC3_008109-T2 ID=KJC3_008109-T2|Name=KJC3_008109-T2|organism=Aspergillus niger KJC3|type=CDS|length=2610bp|location=Sequence derived from alignment at ch6:994671..996629- (Aspergillus niger KJC3)
AGGTTCAAAAAGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCCT
GACGGCAAACTGTATGGTACAGGAAGCGAGGATGGAACGATCAAGTTGTG
GAAGGCTTGCAGGGAGCCGTATGGCCTCTGGCGGTGACAAAATCTGGGAC
ACTCACACTGGCGAATGCAAACACACCCTCCAGCACTCGCACATCTGTCG
TGCAGTAGCGTTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTG
GTTTCGAGAAGAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGT
AACAGCTCCTCACCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTC
CGCGGTAACAAGCTACGAGATTGGCCCCGGGGTTCACGGCGGCACCATCA
AATCGATTGTCTGGAATCAGGACTACAACATCCTTACGACCGCCGCGGAA
GACCGCAAAATCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGA
ATACGCCGTAGAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCG
TCAGACCTAACGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTT
TATCTATTCGACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTT
CCGCTATGAGGTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGG
TCACAGGTAGTGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACG
GAGGAAGAGCTGGATGCCATTCAGGATTGGAACCTTCCTCGGCCACAAGG
GCGCGGTATGGCAAGCCCGTCTCTCGACAGATGCGAATTTGGCAGCAACC
GCAGCTGCGGACTTCTCCGCAGGTTCAAAAAGGCCATCACGGCCCGATCT
GGTCTGTCAGTTTCTCGCCTGACGGCAAACTGTATGGTACAGGAAGCGAG
GATGGAACGATCAAGTTGTGGAAGGCTTGCAGGGAGCCGTATGGCCTCTG
GCGGTGACAAAATCTGGGACACTCACACTGGCGAATGCAAACACACCCTC
CAGCACTCGCACATCTGTCGTGCAGTAGCGTTTCCCATCCAGCCTTCCCC
CCAGGTCGTCGCAACAGGTGGTTTCGAGAAGAAGCTCCGCATTTTCGACC
TCACTCGCAGTGGGGGCAGTAACAGCTCCTCACCGACAAGTGCCACCCCC
AACAACGACGCCAGTCCTTCCGCGGTAACAAGCTACGAGATTGGCCCCGG
GGTTCACGGCGGCACCATCAAATCGATTGTCTGGAATCAGGACTACAACA
TCCTTACGACCGCCGCGGAAGACCGCAAAATCAGATGGTGGGATCTTCGC
TCGCGCCACCCAGTCGTCGAATACGCCGTAGAAGGTACCATCGGGAGTTG
CGAACTTAATTCCCTCGCCGTCAGACCTAACGACGCCGGAATTCTTACCG
TCGCGGCCGGCAGATCCGTTTATCTATTCGACGGACTAAGCCCCGGTCGT
CTCCTGAAGAAGATCGATTTCCGCTATGAGGTCGCCAGTGCAGCGGTCAA
CAATGAAACAAGCAGGTTGGTCACAGGTAGTGCCGAGGATACCTGGGCGA
GAGTTTATGACGTCCGCACGGAGGAAGAGCTGGATGCCATTCAGGATTGG
AACCTTCCTCGGCCACAAGGGCGCGGTATGGCAAGCCCGTCTCTCGACAG
ATGCGAATTTGGCAGCAACCGCAGCTGCGGACTTCTCCGCAGGTTCAAAA
AGGCCATCACGGCCCGATCTGGTCTGTCAGTTTCTCGCCTGACGGCAAAC
TGTATGGTACAGGAAGCGAGGATGGAACGATCAAGTTGTGGAAGGCTTGC
AGGGAGCCGTATGGCCTCTGGCGGTGACAAAATCTGGGACACTCACACTG
GCGAATGCAAACACACCCTCCAGCACTCGCACATCTGTCGTGCAGTAGCG
TTTCCCATCCAGCCTTCCCCCCAGGTCGTCGCAACAGGTGGTTTCGAGAA
GAAGCTCCGCATTTTCGACCTCACTCGCAGTGGGGGCAGTAACAGCTCCT
CACCGACAAGTGCCACCCCCAACAACGACGCCAGTCCTTCCGCGGTAACA
AGCTACGAGATTGGCCCCGGGGTTCACGGCGGCACCATCAAATCGATTGT
CTGGAATCAGGACTACAACATCCTTACGACCGCCGCGGAAGACCGCAAAA
TCAGATGGTGGGATCTTCGCTCGCGCCACCCAGTCGTCGAATACGCCGTA
GAAGGTACCATCGGGAGTTGCGAACTTAATTCCCTCGCCGTCAGACCTAA
CGACGCCGGAATTCTTACCGTCGCGGCCGGCAGATCCGTTTATCTATTCG
ACGGACTAAGCCCCGGTCGTCTCCTGAAGAAGATCGATTTCCGCTATGAG
GTCGCCAGTGCAGCGGTCAACAATGAAACAAGCAGGTTGGTCACAGGTAG
TGCCGAGGATACCTGGGCGAGAGTTTATGACGTCCGCACGGAGGAAGAGC
TGGATGCCATTCAGGATTGGAACCTTCCTCGGCCACAAGGGCGCGGTATG
GCAAGCCCGTCTCTCGACAGATGCGAATTTGGCAGCAACCGCAGCTGCGG
ACTTCTCCGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008109KJC3_008109Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008109-T2KJC3_008109-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008109-T2.cdsKJC3_008109-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008109-T2.utr3p1KJC3_008109-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008109-T2.exon5KJC3_008109-T2.exon5Aspergillus niger KJC3exon
KJC3_008109-T2.exon4KJC3_008109-T2.exon4Aspergillus niger KJC3exon
KJC3_008109-T2.exon3KJC3_008109-T2.exon3Aspergillus niger KJC3exon
KJC3_008109-T2.exon2KJC3_008109-T2.exon2Aspergillus niger KJC3exon
KJC3_008109-T2.exon1KJC3_008109-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008109-T2.utr5p3KJC3_008109-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_008109-T2.utr5p2KJC3_008109-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008109-T2.utr5p1KJC3_008109-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:994671..996629 -
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