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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:997269..999936+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008110-T1 ID=KJC3_008110-T1|Name=KJC3_008110-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2668bp|location=Sequence derived from alignment at ch6:997269..999936+ (Aspergillus niger KJC3)
TCCCCCCCTCTCTCTCTTCCCAAAGGTGCCTTGAAACCCTCCCGGCCATC
TTTGGTGCCTCCATCTCATCCTTTTGGCTCTTGCCAGTTCCCCCTCTTCA
TCTCTAACCTTCCCTACTGGGATCTATATTTCCCTACTTCTCTCCACTGG
TCTATGTATGCCTGAGTTCAAGATCTCCGCTTCTTTGGAGGGCCACGGCG
ATGATGTAAGAACATCCCGGCTGTTGACGCTGGCCACCTTTCACCTTCAA
CCCCCCTCCATTGTCGCCCACTGACGCCTCTTTCTCTCACTCTCAGGTTC
GCGCCGTGGCCTTTCCGAATCCCAATGCTATATTTTCGGCGTCGCGAGAT
GCAACAGTCCGACTCTGGAAACTAGTCTCTACCCCACCTCCGGCATATGA
CTACACCATCACCTCTCACGGCCAGGCCTTCATCAACGCTTTGGCATACT
ACCCACCTACCCCCCAGTTTCCCGATGGACTTGTCCTTTCCGGTGGTCAA
GATACTATCATTGAAGCCAGACAACCAGGCAAAGCTGCCGACGATAACGC
GGATGCTATGCTCTTGGGCCATACACATAATGTCTGTGCGCTGGATGTGT
CACATGATGGCGGATGGGTAGTCAGCGGAAGCTGGGACTCGACAGCTAGA
CTATGGAAAGTGGGTAAATGGGAAACCGATGTCGTGCTGGAGGGCCATCA
AGGAAGTGTTTGGACGGTGCTTGCCTATGACAAGGATACGGTCATCACAG
GTAGGCGCGCCTTACCCCTGTATATGAGACAGATGGGTCGTTCTATGGAT
ATGCTAATAATTCCCCAGGCTGCGCGGACAAAATAATACGTATTTTTAAC
ACCTCTGGCACACTGCTGAGAACAATCGAAAATTCACAGGACGTTGTGAG
AGCTCTTTGCAAGGTTCCCGCTTCGAACCCCACCGGGGCGCACTTTGCTT
CGGCGAGCAACGATGGAGTGATTCGTCTTTTTACCATACAAGGCCAACTC
GTCGGGGAGATGCATGGCCACGAGAGCTTCATTTATTCTCTGGCCGCTTT
GCCTTCGGGTGAGTTAGTCAGTTCCGGAGAAGATCGGACGGTGAGAGTCT
GGGATGGTACGCAGTGCGTACAGACGATCACACACCCTGCGATCTCTGTC
TGGAGCGTCGCAGTATGCAAGGAGACCGGCGACATTGTTACAGGAGCCAG
TGACCGAATCACACGCGTGTTTAGCAGGAGCCAGGAGCGCGTGGCAAGCC
CAGAAGTAGTACAACAGTTCGAGAAGACTGTGAAGGAGTCGGCAATCCCA
GAGCAGCAGATTGGGAAGATCAACAAAGATAAGCTTCCGGGTACGGAGTT
TCTCAGGCAGAAATCCGGGACCAAGGACGGGCAGGTGCAGATGATCCGTG
AGGCCGATGGTAGCGTTACTGCTCACACTTGGTCAGCGGCCTCACGGGAA
TGGGTTGCGGTTGGCACGGTAGTTGATTCCGCTGCCAGCAGTGGAAGGAA
AACGGAGTATCTGGGTCAAGACTACGACTATGTCTTTGATGTCGACGTGG
AAGACGGCAAACCCCCCCTCAAATTGCCATACAACGTCTCTCAAAACCCC
TACGAGGCTGCGACCAAGTTTATCCAGGACAACGAACTGTCGATGAATTA
CCTTGATCAAGTTGCTCAGTTCATCGTTCAGAATACGCAAGGTGCGACTC
TTGGTCAGACGTCTCAGGGGCCGACGCCCGCGGGGGCCGATCCCTGGGGT
CAAGAGAGGCGTTATCGTCCTGAAGATGCGCAGTCGCCCCCTGCTCCTGA
GGCCCGACCGAAGGTCCTTCCGCAAAAAACATATCTTTCCATAAAATCTG
CTAATCTTAAACTGATCGCTAAGAAGTTGCAAGAGCTGAACCAACACGTC
ATATCCTCCGGATCGAAAGACCTGTCGCTCAGCCCTTCAGAGTTGGAGAC
GGTGGCAACCTTGTGTGGTCAGTTGGAGTCTTCGAATGTTGAGCAGTCTC
CGGCAGTGGAGGCTGGTGTTGTTTTACTATACAAGGTCGCAACCGTCTGG
CCCGTCGCAAGCAGACTACCAGGTCTTGATCTTCTCCGCTTGTCCGCCGC
TGCTACTCCCGTGACTGCCACTGCAGATTACGATGGCAAGGATCTCATCT
CAGGGATTAAGTCTAGCGGGGTGTTCGATTCACCGTTCAATGTCAATAAT
GCGATGCTGTCAATACGCATGCTCGCCAACCTTTTCGAAACGGATGCGGG
ACGTGACCTGGCCACTAGCAAGTTTGAGCAGATTCTGAGCGGCGTCAAGT
CCGCTTTAACCAACAGTGGGACGACGCCGAACCGAAATCTCACCATTGCC
ATTACAACACTCTACATCAACTTTGCCGTTTACCTGACCTCTGCGGGCAG
AGAATCGATGCCTGAGTCATCGGAACAGGCTCTGGTGCTTCTCGGCGAGC
TAACGACATTGATTACCGGTGAAAAGGACTCTGAAGCAGTCTACCGCGGC
CTTGTGGCTCTAGGGACCTTGATCAAGGGACTAGGGGAAGAAGTCAGGAC
TGCGGCCAAGGAAGTGTACGATGTCGATGATGTTTTGAAGAAGGTTTCAA
GCTCTGGTCTTGGTAAAGAACCAAGAATCAAGGGTATCATAGGCGAGATC
AAGGAGTCGTTATCATGA back to topCoding sequence (CDS) from alignment at ch6:997269..999936+ >KJC3_008110-T1 ID=KJC3_008110-T1|Name=KJC3_008110-T1|organism=Aspergillus niger KJC3|type=CDS|length=7056bp|location=Sequence derived from alignment at ch6:997269..999936+ (Aspergillus niger KJC3)
ATGCCTGAGTTCAAGATCTCCGCTTCTTTGGAGGGCCACGGCGATGATGT
TCGCGCCGTGGCCTTTCCGAATCCCAATGCTATATTTTCGGCGTCGCGAG
ATGCAACAGTCCGACTCTGGAAACTAGTCTCTACCCCACCTCCGGCATAT
GACTACACCATCACCTCTCACGGCCAGGCCTTCATCAACGCTTTGGCATA
CTACCCACCTACCCCCCAGTTTCCCGATGGACTTGTCCTTTCCGGTGGTC
AAGATACTATCATTGAAGCCAGACAACCAGGCAAAGCTGCCGACGATAAC
GCGGATGCTATGCTCTTGGGCCATACACATAATGTCTGTGCGCTGGATGT
GTCACATGATGGCGGATGGGTAGTCAGCGGAAGCTGGGACTCGACAGCTA
GACTATGGAAAGTGGGTAAATGGGAAACCGATGTCGTGCTGGAGGGCCAT
CAAGGAAGTGTTTGGACGGTGCTTGCCTATGACAAGGATACGGTCATCAC
AGGCTGCGCGGACAAAATAATACGTATTTTTAACACCTCTGGCACACTGC
TGAGAACAATCGAAAATTCACAGGACGTTGTGAGAGCTCTTTGCAAGGTT
CCCGCTTCGAACCCCACCGGGGCGCACTTTGCTTCGGCGAGCAACGATGG
AGTGATTCGTCTTTTTACCATACAAGGCCAACTCGTCGGGGAGATGCATG
GCCACGAGAGCTTCATTTATTCTCTGGCCGCTTTGCCTTCGGGTGAGTTA
GTCAGTTCCGGAGAAGATCGGACGGTGAGAGTCTGGGATGGTACGCAGTG
CGTACAGACGATCACACACCCTGCGATCTCTGTCTGGAGCGTCGCAGTAT
GCAAGGAGACCGGCGACATTGTTACAGGAGCCAGTGACCGAATCACACGC
GTGTTTAGCAGGAGCCAGGAGCGCGTGGCAAGCCCAGAAGTAGTACAACA
GTTCGAGAAGACTGTGAAGGAGTCGGCAATCCCAGAGCAGCAGATTGGGA
AGATCAACAAAGATAAGCTTCCGGGTACGGAGTTTCTCAGGCAGAAATCC
GGGACCAAGGACGGGCAGGTGCAGATGATCCGTGAGGCCGATGGTAGCGT
TACTGCTCACACTTGGTCAGCGGCCTCACGGGAATGGGTTGCGGTTGGCA
CGGTAGTTGATTCCGCTGCCAGCAGTGGAAGGAAAACGGAGTATCTGGGT
CAAGACTACGACTATGTCTTTGATGTCGACGTGGAAGACGGCAAACCCCC
CCTCAAATTGCCATACAACGTCTCTCAAAACCCCTACGAGGCTGCGACCA
AGTTTATCCAGGACAACGAACTGTCGATGAATTACCTTGATCAAGTTGCT
CAGTTCATCGTTCAGAATACGCAAGGTGCGACTCTTGGTCAGACGTCTCA
GGGGCCGACGCCCGCGGGGGCCGATCCCTGGGGTCAAGAGAGGCGTTATC
GTCCTGAAGATGCGCAGTCGCCCCCTGCTCCTGAGGCCCGACCGAAGGTC
CTTCCGCAAAAAACATATCTTTCCATAAAATCTGCTAATCTTAAACTGAT
CGCTAAGAAGTTGCAAGAGCTGAACCAACACGTCATATCCTCCGGATCGA
AAGACCTGTCGCTCAGCCCTTCAGAGTTGGAGACGGTGGCAACCTTGTGT
GGTCAGTTGGAGTCTTCGAATGTTGAGCAGTCTCCGGCAGTGGAGGCTGG
TGTTGTTTTACTATACAAGGTCGCAACCGTCTGGCCCGTCGCAAGCAGAC
TACCAGGTCTTGATCTTCTCCGCTTGTCCGCCGCTGCTACTCCCGTGACT
GCCACTGCAGATTACGATGGCAAGGATCTCATCTCAGGGATTAAGTCTAG
CGGGGTGTTCGATTCACCGTTCAATGTCAATAATGCGATGCTGTCAATAC
GCATGCTCGCCAACCTTTTCGAAACGGATGCGGGACGTGACCTGGCCACT
AGCAAGTTTGAGCAGATTCTGAGCGGCGTCAAGTCCGCTTTAACCAACAG
TGGGACGACGCCGAACCGAAATCTCACCATTGCCATTACAACACTCTACA
TCAACTTTGCCGTTTACCTGACCTCTGCGGGCAGAGAATCGATGCCTGAG
TCATCGGAACAGGCTCTGGTGCTTCTCGGCGAGCTAACGACATTGATTAC
CGGTGAAAAGGACTCTGAAGCAGTCTACCGCGGCCTTGTGGCTCTAGGGA
CCTTGATCAAGGGACTAGGGGAAGAAGTCAGGACTGCGGCCAAGGAAGTG
TACGATGTCGATGATGTTTTGAAGAAGGTTTCAAGCTCTGGTCTTGGTAA
AGAACCAAGAATCAAGGGTATCATAGGCGAGATCAAGGAGTCGTTATCAT
GAATGCCTGAGTTCAAGATCTCCGCTTCTTTGGAGGGCCACGGCGATGAT
GTTCGCGCCGTGGCCTTTCCGAATCCCAATGCTATATTTTCGGCGTCGCG
AGATGCAACAGTCCGACTCTGGAAACTAGTCTCTACCCCACCTCCGGCAT
ATGACTACACCATCACCTCTCACGGCCAGGCCTTCATCAACGCTTTGGCA
TACTACCCACCTACCCCCCAGTTTCCCGATGGACTTGTCCTTTCCGGTGG
TCAAGATACTATCATTGAAGCCAGACAACCAGGCAAAGCTGCCGACGATA
ACGCGGATGCTATGCTCTTGGGCCATACACATAATGTCTGTGCGCTGGAT
GTGTCACATGATGGCGGATGGGTAGTCAGCGGAAGCTGGGACTCGACAGC
TAGACTATGGAAAGTGGGTAAATGGGAAACCGATGTCGTGCTGGAGGGCC
ATCAAGGAAGTGTTTGGACGGTGCTTGCCTATGACAAGGATACGGTCATC
ACAGGCTGCGCGGACAAAATAATACGTATTTTTAACACCTCTGGCACACT
GCTGAGAACAATCGAAAATTCACAGGACGTTGTGAGAGCTCTTTGCAAGG
TTCCCGCTTCGAACCCCACCGGGGCGCACTTTGCTTCGGCGAGCAACGAT
GGAGTGATTCGTCTTTTTACCATACAAGGCCAACTCGTCGGGGAGATGCA
TGGCCACGAGAGCTTCATTTATTCTCTGGCCGCTTTGCCTTCGGGTGAGT
TAGTCAGTTCCGGAGAAGATCGGACGGTGAGAGTCTGGGATGGTACGCAG
TGCGTACAGACGATCACACACCCTGCGATCTCTGTCTGGAGCGTCGCAGT
ATGCAAGGAGACCGGCGACATTGTTACAGGAGCCAGTGACCGAATCACAC
GCGTGTTTAGCAGGAGCCAGGAGCGCGTGGCAAGCCCAGAAGTAGTACAA
CAGTTCGAGAAGACTGTGAAGGAGTCGGCAATCCCAGAGCAGCAGATTGG
GAAGATCAACAAAGATAAGCTTCCGGGTACGGAGTTTCTCAGGCAGAAAT
CCGGGACCAAGGACGGGCAGGTGCAGATGATCCGTGAGGCCGATGGTAGC
GTTACTGCTCACACTTGGTCAGCGGCCTCACGGGAATGGGTTGCGGTTGG
CACGGTAGTTGATTCCGCTGCCAGCAGTGGAAGGAAAACGGAGTATCTGG
GTCAAGACTACGACTATGTCTTTGATGTCGACGTGGAAGACGGCAAACCC
CCCCTCAAATTGCCATACAACGTCTCTCAAAACCCCTACGAGGCTGCGAC
CAAGTTTATCCAGGACAACGAACTGTCGATGAATTACCTTGATCAAGTTG
CTCAGTTCATCGTTCAGAATACGCAAGGTGCGACTCTTGGTCAGACGTCT
CAGGGGCCGACGCCCGCGGGGGCCGATCCCTGGGGTCAAGAGAGGCGTTA
TCGTCCTGAAGATGCGCAGTCGCCCCCTGCTCCTGAGGCCCGACCGAAGG
TCCTTCCGCAAAAAACATATCTTTCCATAAAATCTGCTAATCTTAAACTG
ATCGCTAAGAAGTTGCAAGAGCTGAACCAACACGTCATATCCTCCGGATC
GAAAGACCTGTCGCTCAGCCCTTCAGAGTTGGAGACGGTGGCAACCTTGT
GTGGTCAGTTGGAGTCTTCGAATGTTGAGCAGTCTCCGGCAGTGGAGGCT
GGTGTTGTTTTACTATACAAGGTCGCAACCGTCTGGCCCGTCGCAAGCAG
ACTACCAGGTCTTGATCTTCTCCGCTTGTCCGCCGCTGCTACTCCCGTGA
CTGCCACTGCAGATTACGATGGCAAGGATCTCATCTCAGGGATTAAGTCT
AGCGGGGTGTTCGATTCACCGTTCAATGTCAATAATGCGATGCTGTCAAT
ACGCATGCTCGCCAACCTTTTCGAAACGGATGCGGGACGTGACCTGGCCA
CTAGCAAGTTTGAGCAGATTCTGAGCGGCGTCAAGTCCGCTTTAACCAAC
AGTGGGACGACGCCGAACCGAAATCTCACCATTGCCATTACAACACTCTA
CATCAACTTTGCCGTTTACCTGACCTCTGCGGGCAGAGAATCGATGCCTG
AGTCATCGGAACAGGCTCTGGTGCTTCTCGGCGAGCTAACGACATTGATT
ACCGGTGAAAAGGACTCTGAAGCAGTCTACCGCGGCCTTGTGGCTCTAGG
GACCTTGATCAAGGGACTAGGGGAAGAAGTCAGGACTGCGGCCAAGGAAG
TGTACGATGTCGATGATGTTTTGAAGAAGGTTTCAAGCTCTGGTCTTGGT
AAAGAACCAAGAATCAAGGGTATCATAGGCGAGATCAAGGAGTCGTTATC
ATGAATGCCTGAGTTCAAGATCTCCGCTTCTTTGGAGGGCCACGGCGATG
ATGTTCGCGCCGTGGCCTTTCCGAATCCCAATGCTATATTTTCGGCGTCG
CGAGATGCAACAGTCCGACTCTGGAAACTAGTCTCTACCCCACCTCCGGC
ATATGACTACACCATCACCTCTCACGGCCAGGCCTTCATCAACGCTTTGG
CATACTACCCACCTACCCCCCAGTTTCCCGATGGACTTGTCCTTTCCGGT
GGTCAAGATACTATCATTGAAGCCAGACAACCAGGCAAAGCTGCCGACGA
TAACGCGGATGCTATGCTCTTGGGCCATACACATAATGTCTGTGCGCTGG
ATGTGTCACATGATGGCGGATGGGTAGTCAGCGGAAGCTGGGACTCGACA
GCTAGACTATGGAAAGTGGGTAAATGGGAAACCGATGTCGTGCTGGAGGG
CCATCAAGGAAGTGTTTGGACGGTGCTTGCCTATGACAAGGATACGGTCA
TCACAGGCTGCGCGGACAAAATAATACGTATTTTTAACACCTCTGGCACA
CTGCTGAGAACAATCGAAAATTCACAGGACGTTGTGAGAGCTCTTTGCAA
GGTTCCCGCTTCGAACCCCACCGGGGCGCACTTTGCTTCGGCGAGCAACG
ATGGAGTGATTCGTCTTTTTACCATACAAGGCCAACTCGTCGGGGAGATG
CATGGCCACGAGAGCTTCATTTATTCTCTGGCCGCTTTGCCTTCGGGTGA
GTTAGTCAGTTCCGGAGAAGATCGGACGGTGAGAGTCTGGGATGGTACGC
AGTGCGTACAGACGATCACACACCCTGCGATCTCTGTCTGGAGCGTCGCA
GTATGCAAGGAGACCGGCGACATTGTTACAGGAGCCAGTGACCGAATCAC
ACGCGTGTTTAGCAGGAGCCAGGAGCGCGTGGCAAGCCCAGAAGTAGTAC
AACAGTTCGAGAAGACTGTGAAGGAGTCGGCAATCCCAGAGCAGCAGATT
GGGAAGATCAACAAAGATAAGCTTCCGGGTACGGAGTTTCTCAGGCAGAA
ATCCGGGACCAAGGACGGGCAGGTGCAGATGATCCGTGAGGCCGATGGTA
GCGTTACTGCTCACACTTGGTCAGCGGCCTCACGGGAATGGGTTGCGGTT
GGCACGGTAGTTGATTCCGCTGCCAGCAGTGGAAGGAAAACGGAGTATCT
GGGTCAAGACTACGACTATGTCTTTGATGTCGACGTGGAAGACGGCAAAC
CCCCCCTCAAATTGCCATACAACGTCTCTCAAAACCCCTACGAGGCTGCG
ACCAAGTTTATCCAGGACAACGAACTGTCGATGAATTACCTTGATCAAGT
TGCTCAGTTCATCGTTCAGAATACGCAAGGTGCGACTCTTGGTCAGACGT
CTCAGGGGCCGACGCCCGCGGGGGCCGATCCCTGGGGTCAAGAGAGGCGT
TATCGTCCTGAAGATGCGCAGTCGCCCCCTGCTCCTGAGGCCCGACCGAA
GGTCCTTCCGCAAAAAACATATCTTTCCATAAAATCTGCTAATCTTAAAC
TGATCGCTAAGAAGTTGCAAGAGCTGAACCAACACGTCATATCCTCCGGA
TCGAAAGACCTGTCGCTCAGCCCTTCAGAGTTGGAGACGGTGGCAACCTT
GTGTGGTCAGTTGGAGTCTTCGAATGTTGAGCAGTCTCCGGCAGTGGAGG
CTGGTGTTGTTTTACTATACAAGGTCGCAACCGTCTGGCCCGTCGCAAGC
AGACTACCAGGTCTTGATCTTCTCCGCTTGTCCGCCGCTGCTACTCCCGT
GACTGCCACTGCAGATTACGATGGCAAGGATCTCATCTCAGGGATTAAGT
CTAGCGGGGTGTTCGATTCACCGTTCAATGTCAATAATGCGATGCTGTCA
ATACGCATGCTCGCCAACCTTTTCGAAACGGATGCGGGACGTGACCTGGC
CACTAGCAAGTTTGAGCAGATTCTGAGCGGCGTCAAGTCCGCTTTAACCA
ACAGTGGGACGACGCCGAACCGAAATCTCACCATTGCCATTACAACACTC
TACATCAACTTTGCCGTTTACCTGACCTCTGCGGGCAGAGAATCGATGCC
TGAGTCATCGGAACAGGCTCTGGTGCTTCTCGGCGAGCTAACGACATTGA
TTACCGGTGAAAAGGACTCTGAAGCAGTCTACCGCGGCCTTGTGGCTCTA
GGGACCTTGATCAAGGGACTAGGGGAAGAAGTCAGGACTGCGGCCAAGGA
AGTGTACGATGTCGATGATGTTTTGAAGAAGGTTTCAAGCTCTGGTCTTG
GTAAAGAACCAAGAATCAAGGGTATCATAGGCGAGATCAAGGAGTCGTTA
TCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008110-T1.utr5p1 | KJC3_008110-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261B3Q |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR013535 |
| DBxref | InterPro:IPR038122 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR011989 |
| DBxref | InterPro:IPR015155 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF08324 |
| DBxref | PFAM:PF09070 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:997269..999936 + |
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