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KJC3_008111-T1, KJC3_008111-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008111-T1
Unique NameKJC3_008111-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1000143..1001471-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008111-T1 ID=KJC3_008111-T1|Name=KJC3_008111-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1329bp|location=Sequence derived from alignment at ch6:1000143..1001471- (Aspergillus niger KJC3)
CTCCTGGCGAAGTTTTCTACACTTATTTATTGCATTGAGGATAACGGAGT
GGTGCTGCATATTCTTCACACTCAACCTTGCACTTAGAGCTCCATTGTAT
GTTCTGTGCCGCGCTCCCCAGGCGGAACCCTGTCCCCGCATTATTTCGAT
ACTATAGTAGATCCGCCAAGATGTCGTTGAAGGTGTGCAACATCTTTACT
ATTTCCACTGAGGAAGAAGAGCAGCACAGACTCACAAGGAATGAACAAAT
AGGCCATCTCCTCAAAGGATGCCGCATCTCTCGATAAAGACCTCATGGAA
ATAGGTGGGTGGTCCTTGGACCAGTTAATGGAACTAGCGGGCCTCTCTGT
CTCTCAAGCCGGTGAGAATGCGATCCTTTCCAGCAACAATGTAGAACCAG
GCACTCTGACATCTCAGTCTACCGTGTTCATCCGCCAAGCTCGGGTAAGG
ATGTTTTGGTTATCTGTGGCCCAGGAAACAACGGTAGGCCTCATACGACC
CTTCACCTCCCTCGGGCACAGAACAAACAACGGTTTTAACCTCCTCCCAG
GCGGCGATGGTCTGGTAGCCGCACGCCATCTAGCTCACTATGGCTATAAG
CCCTCGGTTTACTACCCAAAGCAGGGCAAGAACGAGCTCTATCAGGTAAG
TTCTCAGTAAACCCCCCACAGGTCATTGACATGGCCCGAAGCATGAAACT
GGAGCTCCCCACTCTGTATATATATCTATATACACGCATCCCATCCCATC
ACTATACACATCACCCTCGAATCATAAGCCCCAGCCTAACCCCATGAAAC
AATACAGCGCCTCAAAACCCAACTTGAGAACCTCTCTGTTCCTTTCATTT
CCGACCTCCCCGTTGCCATCAAATCCGCCGACTTCCTCGTCGACGCTATC
TTCGGCTTCTCCTTCGGCGGACCCCTCCGTGAACCCTTCCCGACCATCAT
CTCCCAAATCGAAACAGCCAGTATCCCCGTTCTGAGCGTCGATGCGCCCA
GTTCCTGGGACATTGAGAGCGGGCCACCCAAAGAAGGCCCAGGATCGAAG
TTCATGCCGGAGGCGCTTATTAGTCTGACTGCGCCGAAGCCGTGCGTGAA
GTATTACAAGGGAAGGCATTTTCTAGGTGGACGATTCTTGACGAAGAGTA
TTGCGGATAAGTATAAATTGGATTTGCCGGAGTATCCGGGTATTGAGCAG
ATTGTCGAGGTGGGGGTGAATGCTGAGGGGAGGCTTTGAATGGAGTGGGT
AAATGATGGAATAAAGTGGCCTAATCAGCAAGGCTTGGGTACATAGAGAA
TGAAGGTCAAAGTGATTATTTACGTTGCC
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Coding sequence (CDS) from alignment at ch6:1000143..1001471-

>KJC3_008111-T1 ID=KJC3_008111-T1|Name=KJC3_008111-T1|organism=Aspergillus niger KJC3|type=CDS|length=3930bp|location=Sequence derived from alignment at ch6:1000143..1001471- (Aspergillus niger KJC3)
CGCCTCAAAACCCAACTTGAGAACCTCTCTGTTCCTTTCATTTCCGACCT
CCCCGTTGCCATCAAATCCGCCGACTTCCTCGTCGACGCTATCTTCGGCT
TCTCCTTCGGCGGACCCCTCCGTGAACCCTTCCCGACCATCATCTCCCAA
ATCGAAACAGCCAGTATCCCCGTTCTGAGCGTCGATGCGCCCAGTTCCTG
GGACATTGAGAGCGGGCCACCCAAAGAAGGCCCAGGATCGAAGTTCATGC
CGGAGGCGCTTATTAGTCTGACTGCGCCGAAGCCGTGCGTGAAGTATTAC
AAGGGAAGGCATTTTCTAGGTGGACGATTCTTGACGAAGAGTATTGCGGA
TAAGTATAAATTGGATTTGCCGGAGTATCCGGGTATTGAGCAGATTGTCG
AGGTGGGGGTGAATGCTGAGGGGAGGCTTTGAGCGGCGATGGTCTGGTAG
CCGCACGCCATCTAGCTCACTATGGCTATAAGCCCTCGGTTTACTACCCA
AAGCAGGGCAAGAACGAGCTCTATCAGTCTACCGTGTTCATCCGCCAAGC
TCGGGTAAGGATGTTTTGGTTATCTGTGGCCCAGGAAACAACGGCCATCT
CCTCAAAGGATGCCGCATCTCTCGATAAAGACCTCATGGAAATAGGTGGG
TGGTCCTTGGACCAGTTAATGGAACTAGCGGGCCTCTCTGTCTCTCAAGC
CGATGTTCTGTGCCGCGCTCCCCAGGCGGAACCCTGTCCCCGCATTATTT
CGATACTATAGTAGATCCGCCAAGATGTCGTTGAAGCGCCTCAAAACCCA
ACTTGAGAACCTCTCTGTTCCTTTCATTTCCGACCTCCCCGTTGCCATCA
AATCCGCCGACTTCCTCGTCGACGCTATCTTCGGCTTCTCCTTCGGCGGA
CCCCTCCGTGAACCCTTCCCGACCATCATCTCCCAAATCGAAACAGCCAG
TATCCCCGTTCTGAGCGTCGATGCGCCCAGTTCCTGGGACATTGAGAGCG
GGCCACCCAAAGAAGGCCCAGGATCGAAGTTCATGCCGGAGGCGCTTATT
AGTCTGACTGCGCCGAAGCCGTGCGTGAAGTATTACAAGGGAAGGCATTT
TCTAGGTGGACGATTCTTGACGAAGAGTATTGCGGATAAGTATAAATTGG
ATTTGCCGGAGTATCCGGGTATTGAGCAGATTGTCGAGGTGGGGGTGAAT
GCTGAGGGGAGGCTTTGAGCGGCGATGGTCTGGTAGCCGCACGCCATCTA
GCTCACTATGGCTATAAGCCCTCGGTTTACTACCCAAAGCAGGGCAAGAA
CGAGCTCTATCAGTCTACCGTGTTCATCCGCCAAGCTCGGGTAAGGATGT
TTTGGTTATCTGTGGCCCAGGAAACAACGGCCATCTCCTCAAAGGATGCC
GCATCTCTCGATAAAGACCTCATGGAAATAGGTGGGTGGTCCTTGGACCA
GTTAATGGAACTAGCGGGCCTCTCTGTCTCTCAAGCCGATGTTCTGTGCC
GCGCTCCCCAGGCGGAACCCTGTCCCCGCATTATTTCGATACTATAGTAG
ATCCGCCAAGATGTCGTTGAAGCGCCTCAAAACCCAACTTGAGAACCTCT
CTGTTCCTTTCATTTCCGACCTCCCCGTTGCCATCAAATCCGCCGACTTC
CTCGTCGACGCTATCTTCGGCTTCTCCTTCGGCGGACCCCTCCGTGAACC
CTTCCCGACCATCATCTCCCAAATCGAAACAGCCAGTATCCCCGTTCTGA
GCGTCGATGCGCCCAGTTCCTGGGACATTGAGAGCGGGCCACCCAAAGAA
GGCCCAGGATCGAAGTTCATGCCGGAGGCGCTTATTAGTCTGACTGCGCC
GAAGCCGTGCGTGAAGTATTACAAGGGAAGGCATTTTCTAGGTGGACGAT
TCTTGACGAAGAGTATTGCGGATAAGTATAAATTGGATTTGCCGGAGTAT
CCGGGTATTGAGCAGATTGTCGAGGTGGGGGTGAATGCTGAGGGGAGGCT
TTGAGCGGCGATGGTCTGGTAGCCGCACGCCATCTAGCTCACTATGGCTA
TAAGCCCTCGGTTTACTACCCAAAGCAGGGCAAGAACGAGCTCTATCAGT
CTACCGTGTTCATCCGCCAAGCTCGGGTAAGGATGTTTTGGTTATCTGTG
GCCCAGGAAACAACGGCCATCTCCTCAAAGGATGCCGCATCTCTCGATAA
AGACCTCATGGAAATAGGTGGGTGGTCCTTGGACCAGTTAATGGAACTAG
CGGGCCTCTCTGTCTCTCAAGCCGATGTTCTGTGCCGCGCTCCCCAGGCG
GAACCCTGTCCCCGCATTATTTCGATACTATAGTAGATCCGCCAAGATGT
CGTTGAAGCGCCTCAAAACCCAACTTGAGAACCTCTCTGTTCCTTTCATT
TCCGACCTCCCCGTTGCCATCAAATCCGCCGACTTCCTCGTCGACGCTAT
CTTCGGCTTCTCCTTCGGCGGACCCCTCCGTGAACCCTTCCCGACCATCA
TCTCCCAAATCGAAACAGCCAGTATCCCCGTTCTGAGCGTCGATGCGCCC
AGTTCCTGGGACATTGAGAGCGGGCCACCCAAAGAAGGCCCAGGATCGAA
GTTCATGCCGGAGGCGCTTATTAGTCTGACTGCGCCGAAGCCGTGCGTGA
AGTATTACAAGGGAAGGCATTTTCTAGGTGGACGATTCTTGACGAAGAGT
ATTGCGGATAAGTATAAATTGGATTTGCCGGAGTATCCGGGTATTGAGCA
GATTGTCGAGGTGGGGGTGAATGCTGAGGGGAGGCTTTGAGCGGCGATGG
TCTGGTAGCCGCACGCCATCTAGCTCACTATGGCTATAAGCCCTCGGTTT
ACTACCCAAAGCAGGGCAAGAACGAGCTCTATCAGTCTACCGTGTTCATC
CGCCAAGCTCGGGTAAGGATGTTTTGGTTATCTGTGGCCCAGGAAACAAC
GGCCATCTCCTCAAAGGATGCCGCATCTCTCGATAAAGACCTCATGGAAA
TAGGTGGGTGGTCCTTGGACCAGTTAATGGAACTAGCGGGCCTCTCTGTC
TCTCAAGCCGATGTTCTGTGCCGCGCTCCCCAGGCGGAACCCTGTCCCCG
CATTATTTCGATACTATAGTAGATCCGCCAAGATGTCGTTGAAGCGCCTC
AAAACCCAACTTGAGAACCTCTCTGTTCCTTTCATTTCCGACCTCCCCGT
TGCCATCAAATCCGCCGACTTCCTCGTCGACGCTATCTTCGGCTTCTCCT
TCGGCGGACCCCTCCGTGAACCCTTCCCGACCATCATCTCCCAAATCGAA
ACAGCCAGTATCCCCGTTCTGAGCGTCGATGCGCCCAGTTCCTGGGACAT
TGAGAGCGGGCCACCCAAAGAAGGCCCAGGATCGAAGTTCATGCCGGAGG
CGCTTATTAGTCTGACTGCGCCGAAGCCGTGCGTGAAGTATTACAAGGGA
AGGCATTTTCTAGGTGGACGATTCTTGACGAAGAGTATTGCGGATAAGTA
TAAATTGGATTTGCCGGAGTATCCGGGTATTGAGCAGATTGTCGAGGTGG
GGGTGAATGCTGAGGGGAGGCTTTGAGCGGCGATGGTCTGGTAGCCGCAC
GCCATCTAGCTCACTATGGCTATAAGCCCTCGGTTTACTACCCAAAGCAG
GGCAAGAACGAGCTCTATCAGTCTACCGTGTTCATCCGCCAAGCTCGGGT
AAGGATGTTTTGGTTATCTGTGGCCCAGGAAACAACGGCCATCTCCTCAA
AGGATGCCGCATCTCTCGATAAAGACCTCATGGAAATAGGTGGGTGGTCC
TTGGACCAGTTAATGGAACTAGCGGGCCTCTCTGTCTCTCAAGCCGATGT
TCTGTGCCGCGCTCCCCAGGCGGAACCCTGTCCCCGCATTATTTCGATAC
TATAGTAGATCCGCCAAGATGTCGTTGAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008111KJC3_008111Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008111-T1KJC3_008111-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008111-T1.cdsKJC3_008111-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008111-T1.utr3p1KJC3_008111-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008111-T1.exon5KJC3_008111-T1.exon5Aspergillus niger KJC3exon
KJC3_008111-T1.exon4KJC3_008111-T1.exon4Aspergillus niger KJC3exon
KJC3_008111-T1.exon3KJC3_008111-T1.exon3Aspergillus niger KJC3exon
KJC3_008111-T1.exon2KJC3_008111-T1.exon2Aspergillus niger KJC3exon
KJC3_008111-T1.exon1KJC3_008111-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008111-T1.utr5p1KJC3_008111-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264GQZ
DBxrefInterPro:IPR036652
DBxrefInterPro:IPR004443
DBxrefPFAM:PF03853
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1000143..1001471 -
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