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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1010650..1012560+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008114-T1 ID=KJC3_008114-T1|Name=KJC3_008114-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1911bp|location=Sequence derived from alignment at ch6:1010650..1012560+ (Aspergillus niger KJC3)
CTCCATATCACCCACTATCCTTCATCCCCTCCTCCACTAACCTCCCTACC
CCGTCAATTGGACTGCTTCTACTCGGAATCCGGTCCATTGACGTCGGAGA
TCCCTTTCCACCTACCCACTCACCCCCTGTCCCCCTAAGCAACATGGCAC
CCCGAATACAGAACTCTGTCGTCTCCAACTCTCTCCTTCCTTACCTTTCC
ACATCTTCTACCTCATCCTCCTCTACATGTCTTCCCAGGCTAGCTACCAC
ATGCCCTTCATCACATGAGTCATGGCGTTCGTGTCGGTCATTTTCGTCCA
CGCCCGCCCCCCAAACCAGACGTCGCCGCGAGATGTTCGCGTGGCTCAAT
ACCGAGGCAGCCATGCTGAAATCCCACACTCCAGGCACAACAAACTACCT
CATGCGGACCAATCCCAAACTCAAGGAGCTGTCGATTGCTGAAACCAGAA
TTTTTCCGGCAAACCCTGCCTACCGCTCCGAGAGCATTCTCAGTGAGGAG
CTGCGGACAGAGATCTACAACCGGGTAGTAAAACAGAAGAAGAGTGTGCG
TGCGGTTAGTGTCGAGCTGAAGGTTGACATGAGGAGAGTCGCTGCCGTAG
TCCGGCTGGTCGAGTTAGAAAAGCGGATGGAAAAACAGGTATGTTTACAG
ATTCTTTCAACCCATTACCAATATGGTTTCCCTCCTACCCTTCTGGCCTT
TCAAAGCGGACATACCTACGGTGCAATGATGAGAAAAATTATAAATTCGA
TTAGTCTTTATGACCCACTTGACTGGGAATGGTTACAACGCCTATTTTCC
TGATATACACCGATCCTTTCTGTTTATTACCATCACAAGCTCTGATCATG
CTGCCTGTACTTCGGTCAATCGCAACTAACAGTCTTGTCTCAGGGTAAAT
CCTTGGCTTTGCCTTACGCTCGTGCAATCCATGAAATGGTACCCGTAACG
CCTCTAGACCATCCCCATGAAGAAATTAACGACCTCCCCGTCCACCGCCT
CACCAACCCTCAAATCTTCTATCCCGTCTCTGAGTCCCGCCAATTCAACC
GTGTTGATGCTGGCCGTGTCTTCTCCGCTGCTCCGGCTTTAGAACATGAG
CAGGTTGCTAAGGATGCTGCCAATCCCTCCGAGGCCATTAGCCGGGTTAC
ACAGAACCCATCGCACATTGAGCTTGTCGGCAAAGGCGATGAAGAGCATC
AGGTCCTCCAGCCGGCGGACGTGCGTATTCCGCACCCCCACATGGTCACA
AGTACCCGTGACATCAAAAGGGTGCCGAATGAGGGTGCCAAACACGCTGA
GCTCTACCAGGCTCGCCTCAACCAGCAAGATGCTGCTGATCAGGAGCGCA
AGCGTCTCGCCCAGGAGCGTAAGGAGAAGCAAACGCAGCGTGTGCAGCCC
GAGGATTCTCGCTTCGAGTTCCGTATCAACGACGTTGTCGTCAGCCAGGA
AACCACCGGCAAGGATGGCCGCAACGCTCGGGCTCCTGGTCGCAGATACG
GTGTTCCCAGCTACGACCGGAAGAAGGGTCAAGTCAAGATCCCCACCCGT
GTGGAGGTTTAAAGATGGCAATCTTGACCTCTTCCGTCTTCGTCAAATCA
TGTTTTATTTTTACCAAATGACATGAGAAATCCTTGTATAGCCCGTCCGT
CTCGCAGTGCGGCATGGTCGGTGGATGTATTTGTATGCCCTCTTGGTTGC
CTTGTTTTTCAGCTGTACGATACAGTCTTTTCGACTTGTTGATCGATGGA
TATTCTTTTTCGAGGAGCTTGTTTGGTTACTACCCCCACCCATTATTTTT
TTTCATTTCCTTCTTACTTTGAAGCCACGAATATGTATCTATAGCCTTTC
ACTATTATTTATCACCTACCTACCTCTTCGAACCTGATACTTCAATACTA
CATACATAAAG back to topCoding sequence (CDS) from alignment at ch6:1010650..1012560+ >KJC3_008114-T1 ID=KJC3_008114-T1|Name=KJC3_008114-T1|organism=Aspergillus niger KJC3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch6:1010650..1012560+ (Aspergillus niger KJC3)
ATGGCACCCCGAATACAGAACTCTGTCGTCTCCAACTCTCTCCTTCCTTA
CCTTTCCACATCTTCTACCTCATCCTCCTCTACATGTCTTCCCAGGCTAG
CTACCACATGCCCTTCATCACATGAGTCATGGCGTTCGTGTCGGTCATTT
TCGTCCACGCCCGCCCCCCAAACCAGACGTCGCCGCGAGATGTTCGCGTG
GCTCAATACCGAGGCAGCCATGCTGAAATCCCACACTCCAGGCACAACAA
ACTACCTCATGCGGACCAATCCCAAACTCAAGGAGCTGTCGATTGCTGAA
ACCAGAATTTTTCCGGCAAACCCTGCCTACCGCTCCGAGAGCATTCTCAG
TGAGGAGCTGCGGACAGAGATCTACAACCGGGTAGTAAAACAGAAGAAGA
GTGTGCGTGCGGTTAGTGTCGAGCTGAAGGTTGACATGAGGAGAGTCGCT
GCCGTAGTCCGGCTGGTCGAGTTAGAAAAGCGGATGGAAAAACAGGGTAA
ATCCTTGGCTTTGCCTTACGCTCGTGCAATCCATGAAATGGTACCCGTAA
CGCCTCTAGACCATCCCCATGAAGAAATTAACGACCTCCCCGTCCACCGC
CTCACCAACCCTCAAATCTTCTATCCCGTCTCTGAGTCCCGCCAATTCAA
CCGTGTTGATGCTGGCCGTGTCTTCTCCGCTGCTCCGGCTTTAGAACATG
AGCAGGTTGCTAAGGATGCTGCCAATCCCTCCGAGGCCATTAGCCGGGTT
ACACAGAACCCATCGCACATTGAGCTTGTCGGCAAAGGCGATGAAGAGCA
TCAGGTCCTCCAGCCGGCGGACGTGCGTATTCCGCACCCCCACATGGTCA
CAAGTACCCGTGACATCAAAAGGGTGCCGAATGAGGGTGCCAAACACGCT
GAGCTCTACCAGGCTCGCCTCAACCAGCAAGATGCTGCTGATCAGGAGCG
CAAGCGTCTCGCCCAGGAGCGTAAGGAGAAGCAAACGCAGCGTGTGCAGC
CCGAGGATTCTCGCTTCGAGTTCCGTATCAACGACGTTGTCGTCAGCCAG
GAAACCACCGGCAAGGATGGCCGCAACGCTCGGGCTCCTGGTCGCAGATA
CGGTGTTCCCAGCTACGACCGGAAGAAGGGTCAAGTCAAGATCCCCACCC
GTGTGGAGGTTTAAATGGCACCCCGAATACAGAACTCTGTCGTCTCCAAC
TCTCTCCTTCCTTACCTTTCCACATCTTCTACCTCATCCTCCTCTACATG
TCTTCCCAGGCTAGCTACCACATGCCCTTCATCACATGAGTCATGGCGTT
CGTGTCGGTCATTTTCGTCCACGCCCGCCCCCCAAACCAGACGTCGCCGC
GAGATGTTCGCGTGGCTCAATACCGAGGCAGCCATGCTGAAATCCCACAC
TCCAGGCACAACAAACTACCTCATGCGGACCAATCCCAAACTCAAGGAGC
TGTCGATTGCTGAAACCAGAATTTTTCCGGCAAACCCTGCCTACCGCTCC
GAGAGCATTCTCAGTGAGGAGCTGCGGACAGAGATCTACAACCGGGTAGT
AAAACAGAAGAAGAGTGTGCGTGCGGTTAGTGTCGAGCTGAAGGTTGACA
TGAGGAGAGTCGCTGCCGTAGTCCGGCTGGTCGAGTTAGAAAAGCGGATG
GAAAAACAGGGTAAATCCTTGGCTTTGCCTTACGCTCGTGCAATCCATGA
AATGGTACCCGTAACGCCTCTAGACCATCCCCATGAAGAAATTAACGACC
TCCCCGTCCACCGCCTCACCAACCCTCAAATCTTCTATCCCGTCTCTGAG
TCCCGCCAATTCAACCGTGTTGATGCTGGCCGTGTCTTCTCCGCTGCTCC
GGCTTTAGAACATGAGCAGGTTGCTAAGGATGCTGCCAATCCCTCCGAGG
CCATTAGCCGGGTTACACAGAACCCATCGCACATTGAGCTTGTCGGCAAA
GGCGATGAAGAGCATCAGGTCCTCCAGCCGGCGGACGTGCGTATTCCGCA
CCCCCACATGGTCACAAGTACCCGTGACATCAAAAGGGTGCCGAATGAGG
GTGCCAAACACGCTGAGCTCTACCAGGCTCGCCTCAACCAGCAAGATGCT
GCTGATCAGGAGCGCAAGCGTCTCGCCCAGGAGCGTAAGGAGAAGCAAAC
GCAGCGTGTGCAGCCCGAGGATTCTCGCTTCGAGTTCCGTATCAACGACG
TTGTCGTCAGCCAGGAAACCACCGGCAAGGATGGCCGCAACGCTCGGGCT
CCTGGTCGCAGATACGGTGTTCCCAGCTACGACCGGAAGAAGGGTCAAGT
CAAGATCCCCACCCGTGTGGAGGTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008114-T1.utr5p1 | KJC3_008114-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008114-T1.utr3p1 | KJC3_008114-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021036 |
| DBxref | PFAM:PF12298 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1010650..1012560 + |
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