You are here

Home

KJC3_008123-T1, KJC3_008123-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008123-T1
Unique NameKJC3_008123-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1033490..1035232+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008123-T1 ID=KJC3_008123-T1|Name=KJC3_008123-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1743bp|location=Sequence derived from alignment at ch6:1033490..1035232+ (Aspergillus niger KJC3)
ATGTCTTCCTTCGAGCAATCTCCATTGTCCGGGAACCAGCAACTGCTCAG
CTCCGACAACTTACTGGACTGGTTTATGCCTGACTTTTGGGGCCCACCGG
CCATCCCGCTACCATTTACAGACCCTCTAAATCAACCGCATCCGCAGATA
TCCAATGGCCCCAACCTCCTATCCGCTCAGTACCCGGGAGCTTCTCAACA
AGAACCTGGAAAGATAGCCATGCAGCAAAGTTATAGATTGATAGAAGATC
TGTCGAAACGTCTGAACACGGAATTGCATAGCTCCGGAATTACATCCGCC
TTCCTCGACGCATGCTTGCAGCAATTCTTCGAGTGGCTTTCCCCATGCTT
TCCGGTCATACACGAACCGACATTTTCAACACGTGAAACCATCCCACCGC
TTCTGCTAAACATGGTAGCCCTCGGTTCTCTCTTTGTATGCCAGCCAGAC
TCATCTCAAAAAGGAGAGATGCTCTGGCGCCTGGGCCATACCGCGGTAGC
AACCTCCTGGCAAACACTTAGTAGCCTGCGGGGGCCGCGAGATGCCTGCG
ATGGGGTCCAATTGGTCATGACGGCGCTTTTGGGGCAGCTATTTGCCCTA
CTATCGAGCAATGAAGGCATACGAACGACAGCATTTGTATGGCATGGACT
TGGCTTCTACTGGGCGCGCACATCTGGCATGTATGCCGCCGAAGGTATGC
AACAATACGATATTCCAGGACGAGATGCTCCAGCCTCGACAAAGCACGCA
GCATGGTTGACATGGGCGGCCATTGAAACCAAACGACGCGCAATCCTAGG
CCACTATATACTCGACGGCCTCATCTCACAAGCTTCCGGTTCCCCGGCCA
GCACTCGTCACCTGATAAATTCCATCAGAACCGCATGCCCTGACTCAGCC
TTCCTCGCAAAGACCGCAGACGACTGGATCGTCGAAATGGAAAGGTCAAG
TCTAACTCAATGTCCCTTCAGCGAAGTCTTTGTCTCCTTCTTCTCACCAG
AATCCCCGAATTTCTCCCCACCACGTCTCTCAATCTTCTCAACCCTTGTC
ACCATAGAGGGTCTGCAGTCCCTCATATCCGACCTCCACGAAACCAACGG
ACCGGTATTTGGCGCAATTTCAGAAAGGCAAATCATCCAAGCGTTGTTGA
ATATCTACGACACAAATATCAGTAAGGGAGCAGCCATCCATGACAGCAAT
CTTCAACTCACCCTCCGCTGGCACACCATTTGTCTTGAACTAGCAGTTTC
CTCTGCTTCCCTATGTCAAAGGATATGCCACGCATATGGTCTACGGCAGC
CCCTTGGAGGAATGGCTACCAAAGAAGATCAACTGTCATTTGATCTGAAC
CAGTGGGCTAGAAGTGCTGGTGCTGTGAGGGCAGTTCTACATGCTTTTGC
TATTACTCGAATCGTCAGTCAGATTCCGTTCAGGTTAGCTCATGCGCCTC
ATATCCCGGCTGCTATATTTGCGTCGGCAGTTGTGATGGGTGGGTGGTGT
TTAGCCCGCGAAGAGACGATCCACGTTGGATTAGATACACCATGGCATGA
CATTTGGCGTGAGGGGCATGACATTGATCAGTACCTCCGACAACAAGATA
CTGACGGGACCAAAGTCCATCTGCTCAACGAAATGAACTTTCTCCAGATC
AGTCTTCAAACTCTCACATCGCGCTGGAGCGTGTCTCGTCCAATGGCGGA
AACAATTCAACAAATAGCCACCTTGGCTCGACAATATCATTGA
back to top

Coding sequence (CDS) from alignment at ch6:1033490..1035232+

>KJC3_008123-T1 ID=KJC3_008123-T1|Name=KJC3_008123-T1|organism=Aspergillus niger KJC3|type=CDS|length=1743bp|location=Sequence derived from alignment at ch6:1033490..1035232+ (Aspergillus niger KJC3)
ATGTCTTCCTTCGAGCAATCTCCATTGTCCGGGAACCAGCAACTGCTCAG
CTCCGACAACTTACTGGACTGGTTTATGCCTGACTTTTGGGGCCCACCGG
CCATCCCGCTACCATTTACAGACCCTCTAAATCAACCGCATCCGCAGATA
TCCAATGGCCCCAACCTCCTATCCGCTCAGTACCCGGGAGCTTCTCAACA
AGAACCTGGAAAGATAGCCATGCAGCAAAGTTATAGATTGATAGAAGATC
TGTCGAAACGTCTGAACACGGAATTGCATAGCTCCGGAATTACATCCGCC
TTCCTCGACGCATGCTTGCAGCAATTCTTCGAGTGGCTTTCCCCATGCTT
TCCGGTCATACACGAACCGACATTTTCAACACGTGAAACCATCCCACCGC
TTCTGCTAAACATGGTAGCCCTCGGTTCTCTCTTTGTATGCCAGCCAGAC
TCATCTCAAAAAGGAGAGATGCTCTGGCGCCTGGGCCATACCGCGGTAGC
AACCTCCTGGCAAACACTTAGTAGCCTGCGGGGGCCGCGAGATGCCTGCG
ATGGGGTCCAATTGGTCATGACGGCGCTTTTGGGGCAGCTATTTGCCCTA
CTATCGAGCAATGAAGGCATACGAACGACAGCATTTGTATGGCATGGACT
TGGCTTCTACTGGGCGCGCACATCTGGCATGTATGCCGCCGAAGGTATGC
AACAATACGATATTCCAGGACGAGATGCTCCAGCCTCGACAAAGCACGCA
GCATGGTTGACATGGGCGGCCATTGAAACCAAACGACGCGCAATCCTAGG
CCACTATATACTCGACGGCCTCATCTCACAAGCTTCCGGTTCCCCGGCCA
GCACTCGTCACCTGATAAATTCCATCAGAACCGCATGCCCTGACTCAGCC
TTCCTCGCAAAGACCGCAGACGACTGGATCGTCGAAATGGAAAGGTCAAG
TCTAACTCAATGTCCCTTCAGCGAAGTCTTTGTCTCCTTCTTCTCACCAG
AATCCCCGAATTTCTCCCCACCACGTCTCTCAATCTTCTCAACCCTTGTC
ACCATAGAGGGTCTGCAGTCCCTCATATCCGACCTCCACGAAACCAACGG
ACCGGTATTTGGCGCAATTTCAGAAAGGCAAATCATCCAAGCGTTGTTGA
ATATCTACGACACAAATATCAGTAAGGGAGCAGCCATCCATGACAGCAAT
CTTCAACTCACCCTCCGCTGGCACACCATTTGTCTTGAACTAGCAGTTTC
CTCTGCTTCCCTATGTCAAAGGATATGCCACGCATATGGTCTACGGCAGC
CCCTTGGAGGAATGGCTACCAAAGAAGATCAACTGTCATTTGATCTGAAC
CAGTGGGCTAGAAGTGCTGGTGCTGTGAGGGCAGTTCTACATGCTTTTGC
TATTACTCGAATCGTCAGTCAGATTCCGTTCAGGTTAGCTCATGCGCCTC
ATATCCCGGCTGCTATATTTGCGTCGGCAGTTGTGATGGGTGGGTGGTGT
TTAGCCCGCGAAGAGACGATCCACGTTGGATTAGATACACCATGGCATGA
CATTTGGCGTGAGGGGCATGACATTGATCAGTACCTCCGACAACAAGATA
CTGACGGGACCAAAGTCCATCTGCTCAACGAAATGAACTTTCTCCAGATC
AGTCTTCAAACTCTCACATCGCGCTGGAGCGTGTCTCGTCCAATGGCGGA
AACAATTCAACAAATAGCCACCTTGGCTCGACAATATCATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008123KJC3_008123Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008123-T1.exon1KJC3_008123-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008123-T1.cdsKJC3_008123-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008123-T1KJC3_008123-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1033490..1035232 +
Powered by Drupal