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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1128840..1130436- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008156-T1 ID=KJC3_008156-T1|Name=KJC3_008156-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1597bp|location=Sequence derived from alignment at ch6:1128840..1130436- (Aspergillus niger KJC3)
CAATTTACTACCATGGAGTTGGGTCCAGGTTGATCAATACCAAGTCATTG
GAGGTTAGTGATCAGTTGACCATGTCCTATAGTCGGAGTTGAAGCTTGAT
GATTTAACCAGGTAGAGTGTTGAGGCAGACTCATGAAACTCAACTTCCAT
GATGTGAGCTTTTCAGTCCGTGAAGACCAAAGCCCCTCATGATATATTTG
GACCGGCACGAGGAACCTAAGCGATTCTCGCATCCGACGGATCAACGACG
TGTCTCTCGGCGGCCACAAACCTCAGATACACACCTGCTGCTAATTAATC
GTACCCTATACGAAATACGCAATATACGGCGGCAGACTGTCTATATAAAA
AGGCCGCGGCATTTCCCTTGGTCCCCTGACCCCACACAACCCGCCGAATA
CGCAAATACGACAAGCGGTCCGCTCGGATTCCCCGAACAACAGTATCCGG
GCCGTTACGCCTTTGCCTATACGCACCCACAGCATGGCCCCTTGAGGCGA
AACGGCTGCTTGCGTTCCAGCGGTCAAGCCATGTGGATATGGCTGTTAAG
GCTCGAACTATAAATGGCATGGATGTCCCCTGACCGTTACCGACGAGAAC
TTCAAATCCAGAGCCCAACAACCACCATGTCCATCGACCTCACTGGGAAA
ACTTGCCTCGTCACCGGTGGCGCCGGTGGCCTAGGCAAAGCTATTGCTAC
CCGGTTCTACTCCGCCGGAGCCAACGTGGTCGTCTGCGACATCAACGAGG
AGCGACTCCGTCAGACGTCGCTGGATCTTGCCGGACCCAGCGGCGATGCA
AGACTCAAGGTCATCAAGACAGACATCGCCTCTGCGACAGAGGTGCAAGC
CCTTTTCGACGAGATTGTCGCGAATTTCCAAAAGCTTGATATTCTCATCA
ACAATGCCGGAATCATGGATCAATTCGATGCTGTCGGTGATCTGGATGAG
AAGCTGTGGGACAAGGTCATGGCTGTGAATTTGACTGCGCCTTTCCTGTT
GAGCAAGCTGGCCGTTCGGAATATGCTTGCTCAGGATGTAGTCAATGGAA
GTATCGTCAACATCGTCTCCATTGCTGGGAAGGCAGGATTTATGGCGGGT
ATGTCTTTTGCTCATTGGCTTCTTTTGCCTGGGTCGATTGACTGACAAGT
ACAGGTGCCGCGTATACCGCTAGCAAGCACGGCCTTGTTGGCTTGACCAA
GAACACGGCTTCGTACTACGGCAATAAGGGAATCCGATGCAATGCGTTGA
TGATGGGTGGCATGGAGACGAACATCACAGACGCGTTCATGTCCAATATC
AACCTGGAAGGGAAGGACAAGGCTGTTGCTCTCATGACTGCTGCTGCGGC
ACCGATGTGCGACATCAATCGCGTTGCTGAGCTGTGTCTGTCTATCTCCT
GTGGTCCTGGTGCAGAGATCATCAACGGGACATGTATCCCGATCGATCAC
GGAATGTCGGGAGTGTTGGGTTGAGCTCATTCATTTGTCATTCCGACTGT
ATATCTTCACTTCAATGTAAATACTTCACGCATTTCACCTACTTCCACTA
TCCCCTCCACTACACCAAAACGCTCATAAACAATCCGAAACTCCGCC back to topCoding sequence (CDS) from alignment at ch6:1128840..1130436- >KJC3_008156-T1 ID=KJC3_008156-T1|Name=KJC3_008156-T1|organism=Aspergillus niger KJC3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch6:1128840..1130436- (Aspergillus niger KJC3)
GTGCCGCGTATACCGCTAGCAAGCACGGCCTTGTTGGCTTGACCAAGAAC
ACGGCTTCGTACTACGGCAATAAGGGAATCCGATGCAATGCGTTGATGAT
GGGTGGCATGGAGACGAACATCACAGACGCGTTCATGTCCAATATCAACC
TGGAAGGGAAGGACAAGGCTGTTGCTCTCATGACTGCTGCTGCGGCACCG
ATGTGCGACATCAATCGCGTTGCTGAGCTGTGTCTGTCTATCTCCTGTGG
TCCTGGTGCAGAGATCATCAACGGGACATGTATCCCGATCGATCACGGAA
TGTCGGGAGTGTTGGGTTGAATGGCATGGATGTCCCCTGACCGTTACCGA
CGAGAACTTCAAATCCAGAGCCCAACAACCACCATGTCCATCGACCTCAC
TGGGAAAACTTGCCTCGTCACCGGTGGCGCCGGTGGCCTAGGCAAAGCTA
TTGCTACCCGGTTCTACTCCGCCGGAGCCAACGTGGTCGTCTGCGACATC
AACGAGGAGCGACTCCGTCAGACGTCGCTGGATCTTGCCGGACCCAGCGG
CGATGCAAGACTCAAGGTCATCAAGACAGACATCGCCTCTGCGACAGAGG
TGCAAGCCCTTTTCGACGAGATTGTCGCGAATTTCCAAAAGCTTGATATT
CTCATCAACAATGCCGGAATCATGGATCAATTCGATGCTGTCGGTGATCT
GGATGAGAAGCTGTGGGACAAGGTCATGGCTGTGAATTTGACTGCGCCTT
TCCTGTTGAGCAAGCTGGCCGTTCGGAATATGCTTGCTCAGGATGTAGTC
AATGGAAGTATCGTCAACATCGTCTCCATTGCTGGGAAGGCAGGATTTAT
GGCGGGTGCCGCGTATACCGCTAGCAAGCACGGCCTTGTTGGCTTGACCA
AGAACACGGCTTCGTACTACGGCAATAAGGGAATCCGATGCAATGCGTTG
ATGATGGGTGGCATGGAGACGAACATCACAGACGCGTTCATGTCCAATAT
CAACCTGGAAGGGAAGGACAAGGCTGTTGCTCTCATGACTGCTGCTGCGG
CACCGATGTGCGACATCAATCGCGTTGCTGAGCTGTGTCTGTCTATCTCC
TGTGGTCCTGGTGCAGAGATCATCAACGGGACATGTATCCCGATCGATCA
CGGAATGTCGGGAGTGTTGGGTTGAATGGCATGGATGTCCCCTGACCGTT
ACCGACGAGAACTTCAAATCCAGAGCCCAACAACCACCATGTCCATCGAC
CTCACTGGGAAAACTTGCCTCGTCACCGGTGGCGCCGGTGGCCTAGGCAA
AGCTATTGCTACCCGGTTCTACTCCGCCGGAGCCAACGTGGTCGTCTGCG
ACATCAACGAGGAGCGACTCCGTCAGACGTCGCTGGATCTTGCCGGACCC
AGCGGCGATGCAAGACTCAAGGTCATCAAGACAGACATCGCCTCTGCGAC
AGAGGTGCAAGCCCTTTTCGACGAGATTGTCGCGAATTTCCAAAAGCTTG
ATATTCTCATCAACAATGCCGGAATCATGGATCAATTCGATGCTGTCGGT
GATCTGGATGAGAAGCTGTGGGACAAGGTCATGGCTGTGAATTTGACTGC
GCCTTTCCTGTTGAGCAAGCTGGCCGTTCGGAATATGCTTGCTCAGGATG
TAGTCAATGGAAGTATCGTCAACATCGTCTCCATTGCTGGGAAGGCAGGA
TTTATGGCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008156-T1.utr3p1 | KJC3_008156-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.8 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1128840..1130436 - |
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