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KJC3_008161-T1, KJC3_008161-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008161-T1
Unique NameKJC3_008161-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1139687..1141739-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008161-T1 ID=KJC3_008161-T1|Name=KJC3_008161-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2053bp|location=Sequence derived from alignment at ch6:1139687..1141739- (Aspergillus niger KJC3)
CGTACGCAGCCCAAGCATGGAGCCTCGTGAATCTATCCCACCGTATAATG
AAATTAAACTGTCGAGTTCTCCCATTGGATTAGTGGCCTACCTTCACTGT
CGATACATCACGTGAAAGTGAAGTATTTACTTCTATCAAGCAAGCGATTT
TAATGGTTCACACATTGAGGTGATCAAAGCAGCAGCAGGATGACTTCTGA
CTGCAACAAATACTACTAGTAGTAGCGAGACTCTACATCCGCTGTTTGAC
GGAAGGTCTGTGTCATTGATCCGAAAAGTCATGATGCGTTTCGAAGGTAC
TAATGATTTCGAGAGTATCTAGCCAGACACATATTCTCAAGTGAGACCAT
GGAGAATTGTCTTTACTGCATTATGTTCAGCCAAATACTACGAACTACCT
AGCTATCTATTCGAAAAAACAGTACTACCACTGTACTTACTCAGTACTAC
TAGTACTACTACATACAGTGGGCTGGGAAAGGGTCCACCAATCACAAGCT
GGCCTGCACTCGGCAGACTCCGCGGCCAAAAATTTCCCAAGGCGACCTTG
GAAGCTCTCGGGTCCAGAGTATCACCTCTGTTCCTCAAGTCGCGACACTT
CTAATCAACTATCCTCCATTCATTCATTGATCTTGTTTTTACCTTGTCTT
TTTTTTCTTACATACTTTCCAACTTTTCACATATCTCACGCGTCATCATG
GTCGGGCCCACTGCAACCCTTACTCCTCTTGCTCGCGCCGATGGCTCGGC
TTCCTATCTGTGTCCCTCGACCGGATCCAATATTCTGGGCTCTGTCAATG
CACCTGTCGAGCTTCCTGGACGCCGAGATGCCTTGAAGCCCGAAGAAGCG
ACCGTGGAAGTATTCGTTAAACCGGGTACTGCGCCTGCTGGTGTTGGGGA
ACGGTACGTGGAGGGAATCATCAAGGGAGTCCTCGGAAGGTTGATCTTGG
GACGCGAGAGGGGCTACCCCCGGCGTGGTGTTGTGGTCACGCTAGCCATC
GTCGGCGGCGGGAGTGTAGGAAGAGGAGAGTCGGTACGTATCCTATGAAT
TGGCGATAAGTGGACAACCTCTGTTCAGCTGGCGTCGCTCTGGTGGCTAA
CTCAGTGTCTTGAAATTCTATAATAGTATCTGACCCTTCTGCCCGCGCTG
CTTCATACCGCCCTTCTTGCCTTGCTATCAGCCGCTGTTCCTCTTTCCAT
GACCTTCTCTGCGACTGTTCTGGCCGTAAGCGCGTCGGGCGACATCACCC
GGGAACCGTCGACCGAACAGGCAGCCACAGCCAAGTCCCTGCACGCCCTA
GCGTTCTCATCCAAGGGCCATCTGCTGCTAAATGAGAGCTCAGGGGCCTT
TGACTTTGAGACATGGGAAAGGGTCCACCAGCGCGCGTCGGCAATCTGTC
ATGGCACACCGGCTGTTGGCACTGATGGGGACACTGCCATGGTTGAGGAT
GTAGATGGTCAGCCCCTGGAGGGGATCATGCGCGAGTCTATTGAAGATCA
GATCCACCGTGACTACGCCTGGAAGATTGATGCTGCTTGATTAGCCCGCG
GATGCCACGGCAGCTAAGTAAATTCAGTCGCGACGGGCGGTCACAGCCAG
CGAGCGGTCGCTCCCACGAATTGCCGTCCCTTCTATCGCCAGTGTTCCCA
GGTGGCTTTTACACATGCCCCTTGCACACGAAGGAAGCTTTTTCACCGCA
CGCGGGCCCATGTGCATGAGACTTTCTGGACGAGTGTAGAAGGATTATTA
TAGACGATATTCTACTGGCTGGTATGCAGGCTAAGAGAAGGACACAAGGG
ATGGCCGGGGAGAATTTCGTCGCAGGAACCGAAAAAAAGCCATCTAACAG
GATCACGACGAGGGACGTGCGTGCAAGGAGCCAACCACCACCATCAGTTA
GAAGTCTCGGAAGAGTTACATTCCCAGCGATAAGGCCAGGCGAAACCCCC
AGCTCCAGCCACATGGGGACTGCTGCAATATACCGGATATTAATAGAAAG
TGACCATTCTACTCCTAGAGAGCTATGCGAATGAAGTTGGGAAAAATTCA
AGG
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Coding sequence (CDS) from alignment at ch6:1139687..1141739-

>KJC3_008161-T1 ID=KJC3_008161-T1|Name=KJC3_008161-T1|organism=Aspergillus niger KJC3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch6:1139687..1141739- (Aspergillus niger KJC3)
TATCTGACCCTTCTGCCCGCGCTGCTTCATACCGCCCTTCTTGCCTTGCT
ATCAGCCGCTGTTCCTCTTTCCATGACCTTCTCTGCGACTGTTCTGGCCG
TAAGCGCGTCGGGCGACATCACCCGGGAACCGTCGACCGAACAGGCAGCC
ACAGCCAAGTCCCTGCACGCCCTAGCGTTCTCATCCAAGGGCCATCTGCT
GCTAAATGAGAGCTCAGGGGCCTTTGACTTTGAGACATGGGAAAGGGTCC
ACCAGCGCGCGTCGGCAATCTGTCATGGCACACCGGCTGTTGGCACTGAT
GGGGACACTGCCATGGTTGAGGATGTAGATGGTCAGCCCCTGGAGGGGAT
CATGCGCGAGTCTATTGAAGATCAGATCCACCGTGACTACGCCTGGAAGA
TTGATGCTGCTTGAATGGTCGGGCCCACTGCAACCCTTACTCCTCTTGCT
CGCGCCGATGGCTCGGCTTCCTATCTGTGTCCCTCGACCGGATCCAATAT
TCTGGGCTCTGTCAATGCACCTGTCGAGCTTCCTGGACGCCGAGATGCCT
TGAAGCCCGAAGAAGCGACCGTGGAAGTATTCGTTAAACCGGGTACTGCG
CCTGCTGGTGTTGGGGAACGGTACGTGGAGGGAATCATCAAGGGAGTCCT
CGGAAGGTTGATCTTGGGACGCGAGAGGGGCTACCCCCGGCGTGGTGTTG
TGGTCACGCTAGCCATCGTCGGCGGCGGGAGTGTAGGAAGAGGAGAGTCG
TATCTGACCCTTCTGCCCGCGCTGCTTCATACCGCCCTTCTTGCCTTGCT
ATCAGCCGCTGTTCCTCTTTCCATGACCTTCTCTGCGACTGTTCTGGCCG
TAAGCGCGTCGGGCGACATCACCCGGGAACCGTCGACCGAACAGGCAGCC
ACAGCCAAGTCCCTGCACGCCCTAGCGTTCTCATCCAAGGGCCATCTGCT
GCTAAATGAGAGCTCAGGGGCCTTTGACTTTGAGACATGGGAAAGGGTCC
ACCAGCGCGCGTCGGCAATCTGTCATGGCACACCGGCTGTTGGCACTGAT
GGGGACACTGCCATGGTTGAGGATGTAGATGGTCAGCCCCTGGAGGGGAT
CATGCGCGAGTCTATTGAAGATCAGATCCACCGTGACTACGCCTGGAAGA
TTGATGCTGCTTGAATGGTCGGGCCCACTGCAACCCTTACTCCTCTTGCT
CGCGCCGATGGCTCGGCTTCCTATCTGTGTCCCTCGACCGGATCCAATAT
TCTGGGCTCTGTCAATGCACCTGTCGAGCTTCCTGGACGCCGAGATGCCT
TGAAGCCCGAAGAAGCGACCGTGGAAGTATTCGTTAAACCGGGTACTGCG
CCTGCTGGTGTTGGGGAACGGTACGTGGAGGGAATCATCAAGGGAGTCCT
CGGAAGGTTGATCTTGGGACGCGAGAGGGGCTACCCCCGGCGTGGTGTTG
TGGTCACGCTAGCCATCGTCGGCGGCGGGAGTGTAGGAAGAGGAGAGTCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008161KJC3_008161Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008161-T1KJC3_008161-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008161-T1.cdsKJC3_008161-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008161-T1.utr3p1KJC3_008161-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008161-T1.exon4KJC3_008161-T1.exon4Aspergillus niger KJC3exon
KJC3_008161-T1.exon3KJC3_008161-T1.exon3Aspergillus niger KJC3exon
KJC3_008161-T1.exon2KJC3_008161-T1.exon2Aspergillus niger KJC3exon
KJC3_008161-T1.exon1KJC3_008161-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008161-T1.utr5p3KJC3_008161-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_008161-T1.utr5p2KJC3_008161-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008161-T1.utr5p1KJC3_008161-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.8
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR036345
DBxrefInterPro:IPR027408
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1139687..1141739 -
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