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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1145985..1147106- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008164-T1 ID=KJC3_008164-T1|Name=KJC3_008164-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1122bp|location=Sequence derived from alignment at ch6:1145985..1147106- (Aspergillus niger KJC3)
CTGGTAATGCTGCTGTGAAAGCTGCTGTCAACTTTACTTTCTTGATGCTG
ACATTTCGATAGTCTACATGGGGCGGGTACCAATTCCCGAGTAAGTATTG
ACCCTAGCTAGCGATATCAGCTCCATGCGACCTTCTGCTAATCGATACTC
TGCAACATCAAAGATATTCGAGATCCAGACAGCTGCCATTCGGTATGAAC
TAGGCGACAATCATATTTATGATTTTGTTGAAGGAACCATTCCTTCCAAG
ATGCAACCAGGTACAGTGGCCGGAGAACAGACCCCTCGCGAAGGAGTCGG
CTAAATGTAGCTTGGCACAGGTATTGATGTGGTGGCTTGGAAGGACGAAC
CAGTGTACGCCTACTTCGATGAGCACAATCCCCAAACCGGATTTGCGGCT
TATCATTATTTGGAAGACTACCTTCTCGACGAGGGGCCCTATGATGGGGT
TATCGCATTCAGCCAAGCAGGCACGATGATCCTCACGTACCTGATTCATC
TTGCCAAGCGCGATCCTCAGGCTGAGATGCCATTCAAATTTGCAATTATC
CTTTCGATCACCCATCCCCCTCTTGATTATGAAGCTCTTCAGAAAGGTCG
TGTGATGACCGTGGATCTCGAAGCCACCAAAGGCATTATTCCAATCCCAA
CGGCCCACATCTGGGGCTCACTAGACGAGCCAGCCAGCCGGGTAGCCACG
TCAAATAGTGTTTGCAAGGCTGAGGTGAGATGGGTGTATGTTCACGGTCG
AGGGCACGAAGTTCCCGGCGGAGGGTCAATGGAAGATGTGACCCAAGCCG
TCAATGTTATTCGCAGGGCAGTTGAGACAGCATCCAATCACTGATGCACT
TGGTGACCCCCAAGGGAGCGGCGCTATGTTGATCTCCACACTATGTAGTT
AATCAATGGGGCCGGGAATGTAGGAGTTCAGAGCATTTGACGAAGCCAAC
TTTCAGGGTTCTTCGTGCTTGTACCCACACCCCTCAACCTAAATTAGTTC
CTCCTTTAGCCCACATACTCTGTAGTTCCGCGGGGTCGGAGCAACCAAGT
ATTGCGTATTGCATTGATGGCTGAACTTGATCAACATAGCTACAAAGATG
TTCTTTTCCGTATGAAACTGCC back to topCoding sequence (CDS) from alignment at ch6:1145985..1147106- >KJC3_008164-T1 ID=KJC3_008164-T1|Name=KJC3_008164-T1|organism=Aspergillus niger KJC3|type=CDS|length=1068bp|location=Sequence derived from alignment at ch6:1145985..1147106- (Aspergillus niger KJC3)
GTATTGATGTGGTGGCTTGGAAGGACGAACCAGTGTACGCCTACTTCGAT
GAGCACAATCCCCAAACCGGATTTGCGGCTTATCATTATTTGGAAGACTA
CCTTCTCGACGAGGGGCCCTATGATGGGGTTATCGCATTCAGCCAAGCAG
GCACGATGATCCTCACGTACCTGATTCATCTTGCCAAGCGCGATCCTCAG
GCTGAGATGCCATTCAAATTTGCAATTATCCTTTCGATCACCCATCCCCC
TCTTGATTATGAAGCTCTTCAGAAAGGTCGTGTGATGACCGTGGATCTCG
AAGCCACCAAAGGCATTATTCCAATCCCAACGGCCCACATCTGGGGCTCA
CTAGACGAGCCAGCCAGCCGGGTAGCCACGTCAAATAGTGTTTGCAAGGC
TGAGGTGAGATGGGTGTATGTTCACGGTCGAGGGCACGAAGTTCCCGGCG
GAGGGTCAATGGAAGATGTGACCCAAGCCGTCAATGTTATTCGCAGGGCA
GTTGAGACAGCATCCAATCACTGAATGCAACCAGGTATTGATGTGGTGGC
TTGGAAGGACGAACCAGTGTACGCCTACTTCGATGAGCACAATCCCCAAA
CCGGATTTGCGGCTTATCATTATTTGGAAGACTACCTTCTCGACGAGGGG
CCCTATGATGGGGTTATCGCATTCAGCCAAGCAGGCACGATGATCCTCAC
GTACCTGATTCATCTTGCCAAGCGCGATCCTCAGGCTGAGATGCCATTCA
AATTTGCAATTATCCTTTCGATCACCCATCCCCCTCTTGATTATGAAGCT
CTTCAGAAAGGTCGTGTGATGACCGTGGATCTCGAAGCCACCAAAGGCAT
TATTCCAATCCCAACGGCCCACATCTGGGGCTCACTAGACGAGCCAGCCA
GCCGGGTAGCCACGTCAAATAGTGTTTGCAAGGCTGAGGTGAGATGGGTG
TATGTTCACGGTCGAGGGCACGAAGTTCCCGGCGGAGGGTCAATGGAAGA
TGTGACCCAAGCCGTCAATGTTATTCGCAGGGCAGTTGAGACAGCATCCA
ATCACTGAATGCAACCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008164-T1.utr3p1 | KJC3_008164-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.8 |
| DBxref | InterPro:IPR005645 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF03959 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1145985..1147106 - |
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