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KJC3_008173-T1, KJC3_008173-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008173-T1
Unique NameKJC3_008173-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1175660..1176146+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008173-T1 ID=KJC3_008173-T1|Name=KJC3_008173-T1|organism=Aspergillus niger KJC3|type=mRNA|length=487bp|location=Sequence derived from alignment at ch6:1175660..1176146+ (Aspergillus niger KJC3)
CGTCAGCTCACTTGCTGCTAAGAGCAAAATAACATTATTCTTCCACTTAT
CTCTCTAGGCAAAAGAATATTCCAAGTCAGCCACGATGCATACCCCAAAG
ATCTTACTGTCCTTGTGCCTCACTATCGGTATGGCTGCGGCTTTGCCTGG
TAAGTGGCTCATCTTGTTTGATTTAAAAGGCTGTACTGACGCTCGCAGCG
GTGGGATCTACCAGCATGTTAGACGGTGACTTGTACAACTACAAACGGGG
TACTAGTGAGCTTGACGGAGATCTCTACAACTATAGAAAGCGCAACAACG
CCGAGCTTGATGGTGATCTTTACAACTACAGGCGCAGCAAAGCTCAACTT
GATGGAGACTTGTATAATTACAAGCGTGATGATGCTGAGCTTGATGGTGA
TCTCTACAATTACTAAGTCTGCACTCACCTCTGCGCAATACGCTGTTACC
TCGTACAAGGGGGGTGAATGAATTCCGAATATCCTGG
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Coding sequence (CDS) from alignment at ch6:1175660..1176146+

>KJC3_008173-T1 ID=KJC3_008173-T1|Name=KJC3_008173-T1|organism=Aspergillus niger KJC3|type=CDS|length=564bp|location=Sequence derived from alignment at ch6:1175660..1176146+ (Aspergillus niger KJC3)
ATGCATACCCCAAAGATCTTACTGTCCTTGTGCCTCACTATCGGTATGGC
TGCGGCTTTGCCTGCGGTGGGATCTACCAGCATGTTAGACGGTGACTTGT
ACAACTACAAACGGGGTACTAGTGAGCTTGACGGAGATCTCTACAACTAT
AGAAAGCGCAACAACGCCGAGCTTGATGGTGATCTTTACAACTACAGGCG
CAGCAAAGCTCAACTTGATGGAGACTTGTATAATTACAAGCGTGATGATG
CTGAGCTTGATGGTGATCTCTACAATTACTAAATGCATACCCCAAAGATC
TTACTGTCCTTGTGCCTCACTATCGGTATGGCTGCGGCTTTGCCTGCGGT
GGGATCTACCAGCATGTTAGACGGTGACTTGTACAACTACAAACGGGGTA
CTAGTGAGCTTGACGGAGATCTCTACAACTATAGAAAGCGCAACAACGCC
GAGCTTGATGGTGATCTTTACAACTACAGGCGCAGCAAAGCTCAACTTGA
TGGAGACTTGTATAATTACAAGCGTGATGATGCTGAGCTTGATGGTGATC
TCTACAATTACTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008173KJC3_008173Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008173-T1.utr5p1KJC3_008173-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008173-T1.exon1KJC3_008173-T1.exon1Aspergillus niger KJC3exon
KJC3_008173-T1.exon2KJC3_008173-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008173-T1.cdsKJC3_008173-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008173-T1.utr3p1KJC3_008173-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008173-T1KJC3_008173-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_6.8
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1175660..1176146 +
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