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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1176484..1177828- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008174-T1 ID=KJC3_008174-T1|Name=KJC3_008174-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1345bp|location=Sequence derived from alignment at ch6:1176484..1177828- (Aspergillus niger KJC3)
GTCATTCCTCCCCCATGAATATGAACACTCACTTTACGAGCCATCGTTAC
TCACAACCAGCGGCACCATGAAGAAATACGCCCTCATCGGCACGGGCGGC
CGTGCCATGTTCTTCTACACGGCCATCGTGCGCGATTTCTCCAGCACCGC
CCGACTCGTCGCTTTCTGCGATACCAACTCCACTCGGTTGGCATACGCCA
ACTCGCAGATCCAATCGCTGGGTCACGTTGCAATTCCAACCTACAATGCG
AGCGATTTCGATCGAATGATCGAGGAGACTCGTCCGGATGAGGTGATCGT
CACCACCATCGACCGCACCCACCACCAGTACATCGTCCGTGCCTTGGAAC
TGGGCTGTAATGTTATCACGGAGAAGCCGATGACCATCGATGCGCCACGT
TGTCGACAGATCTTCGACGCCGTGGATCGGACCCAGGGCAAGGTCCGCGT
GACATTCAACTACCGCTACGCCCCGCATAACACGCGCATCGCGGAACTGC
TGGCGAGCGGAGCGATTGGCGAGCTCAATGCCGTGCATTTCGAGTGGGTG
CTCAACACCTCCCATGGAGCAGACTACTTTCGCCGCTGGCACCGCGACAA
GAGAAACACTGGAGGCCTGTTAGTGCATAAATCAACGCACCATTTCGACC
TGGTGAATTTCTGGCTCCGGACTCGGCCCGAGTCGGTCGTTGCGATGGGG
GATCTACGCTTCTATGGAAAGGAGAATGCAGAGCGACGGGGTGAAACGAG
GTTCTACTCGCGCTCTCGTGGAAGCGAATTGGCTCGGGATGACCCGTTTT
CACTGGATCTTGAGGGCAATGAGAAGTTGAAGGGGCTGTACGCGGATGCA
GAGTGGGAAGATGGGTATTACCGTGATCAGAGCGTGTTTGGCGATGGCAT
CAGCATTGAGGACACGATGGGGGTGATGGTCCGGTATGAGTCCGGTGCTG
TGATGACGTATAGTCTCACGGCGTATGCGCCTTGGGAGGGATTTCGGGTG
AACTTCACTGGGAGTAAAGGTCGGCTGGAGGTGGAGGTCGTGGAACAGTC
GTATGTCAATTCGGGTGGTGAGCAGGCATTGGAGGGCGCTCTTGAGCGAC
AGACTATTCTTCTAAGGCCTTTGTTTGAGAAACCAGTGGAGATTGAAGTG
CCTACGGGTCAAGGAGGTCATGGGGGAGGGGATCCCCAGCTGCTGAAAGA
TCTCTTTGGTACTCCGGATACGGATCCTCTGGGCAGAGCTGCGACGCATG
TTGATGGGGCGTGGTCTATTGCTACTGGGATTGCGGCTAATGAATCTATG
AGAAAGGGGGAGGTGGTGCGGGTGAGGGATTTGATGCCGTTGTGA back to topCoding sequence (CDS) from alignment at ch6:1176484..1177828- >KJC3_008174-T1 ID=KJC3_008174-T1|Name=KJC3_008174-T1|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch6:1176484..1177828- (Aspergillus niger KJC3)
ATGAAGAAATACGCCCTCATCGGCACGGGCGGCCGTGCCATGTTCTTCTA
CACGGCCATCGTGCGCGATTTCTCCAGCACCGCCCGACTCGTCGCTTTCT
GCGATACCAACTCCACTCGGTTGGCATACGCCAACTCGCAGATCCAATCG
CTGGGTCACGTTGCAATTCCAACCTACAATGCGAGCGATTTCGATCGAAT
GATCGAGGAGACTCGTCCGGATGAGGTGATCGTCACCACCATCGACCGCA
CCCACCACCAGTACATCGTCCGTGCCTTGGAACTGGGCTGTAATGTTATC
ACGGAGAAGCCGATGACCATCGATGCGCCACGTTGTCGACAGATCTTCGA
CGCCGTGGATCGGACCCAGGGCAAGGTCCGCGTGACATTCAACTACCGCT
ACGCCCCGCATAACACGCGCATCGCGGAACTGCTGGCGAGCGGAGCGATT
GGCGAGCTCAATGCCGTGCATTTCGAGTGGGTGCTCAACACCTCCCATGG
AGCAGACTACTTTCGCCGCTGGCACCGCGACAAGAGAAACACTGGAGGCC
TGTTAGTGCATAAATCAACGCACCATTTCGACCTGGTGAATTTCTGGCTC
CGGACTCGGCCCGAGTCGGTCGTTGCGATGGGGGATCTACGCTTCTATGG
AAAGGAGAATGCAGAGCGACGGGGTGAAACGAGGTTCTACTCGCGCTCTC
GTGGAAGCGAATTGGCTCGGGATGACCCGTTTTCACTGGATCTTGAGGGC
AATGAGAAGTTGAAGGGGCTGTACGCGGATGCAGAGTGGGAAGATGGGTA
TTACCGTGATCAGAGCGTGTTTGGCGATGGCATCAGCATTGAGGACACGA
TGGGGGTGATGGTCCGGTATGAGTCCGGTGCTGTGATGACGTATAGTCTC
ACGGCGTATGCGCCTTGGGAGGGATTTCGGGTGAACTTCACTGGGAGTAA
AGGTCGGCTGGAGGTGGAGGTCGTGGAACAGTCGTATGTCAATTCGGGTG
GTGAGCAGGCATTGGAGGGCGCTCTTGAGCGACAGACTATTCTTCTAAGG
CCTTTGTTTGAGAAACCAGTGGAGATTGAAGTGCCTACGGGTCAAGGAGG
TCATGGGGGAGGGGATCCCCAGCTGCTGAAAGATCTCTTTGGTACTCCGG
ATACGGATCCTCTGGGCAGAGCTGCGACGCATGTTGATGGGGCGTGGTCT
ATTGCTACTGGGATTGCGGCTAATGAATCTATGAGAAAGGGGGAGGTGGT
GCGGGTGAGGGATTTGATGCCGTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008174-T1.utr5p1 | KJC3_008174-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR004104 |
| DBxref | InterPro:IPR000683 |
| DBxref | PFAM:PF02894 |
| DBxref | PFAM:PF01408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1176484..1177828 - |
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