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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1177973..1180075+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008175-T1 ID=KJC3_008175-T1|Name=KJC3_008175-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2103bp|location=Sequence derived from alignment at ch6:1177973..1180075+ (Aspergillus niger KJC3) ATGCGGGGAGACTGGGGTTGGAGAATCTGGGGTAACGATGTCAGATCAGC
CGACGAGATTGATGGTGAGATAGCCTCGGCAGTTATCTGATCAAGTTATA
ATTGACGGAAGTGCAGTGACTTTAACCGGGTTATCTTGGCCGAAAGGATA
TAAATCACGTAGAGTCACCGAGTATCTATTCTCCTGTCTGCAAGCTGGTA
TTCGCGATGGCGACCCGGGCAGAAGAATCCCACGATGCCATCACGGCCGT
GGACACCCTGGCCCATGGCACAGGGAGAGAGAAGGCAGCGGACTTCCTAG
CCACCGTCAAAGAGGAAGAACGGACATTCAGCCCAGAAGAAGAAAAGCGC
GTTCTTAGACGCATCGATCTCCGTATACTGCCTCTTCTGCTAGGAGCATA
CTTCTTCCAACAACTGGACAAATCAACGCTGTCGTACGTGTCCATTTTTG
GCCTCGTCGAGGATGCACATCTGCACGGCCAGCAGTACTCATGGCTTGGA
TCTATTCTGTATCTTGCCCAACTTGTGGTGCAACCACTTGCTGCCTTGCT
ACTTGTAAAGGCCCCAACAGGGAAAGTCATCGGAACCGCGGTGCTGCTAT
GGGGAAGTTCGCTGGCCATCATGGCAGCGTGCACGGACTTTGCCAGCCTA
CTAGGGCTACGACTAACCTTGGGGACATTTGAGGCTATGATAGGTATGTC
CTAGCCTGTATCTGGCATACCGCAGTATGGTGACTAACGAAAATAGCACC
CTCATGTGTGGCCGTCACACAAATGTGGTGGCGTCGAGGCGAGCAGACCC
TTCGGACGGCGATATGGAACGCGATGAACGGGGTCACCTTTATAGTATTA
GCCCTACTATCATCTTATACGGACGATCCTAACCATTCCAATAGGTCGGA
AGTCTATTCACGTACGGACTCGGCCACATCTACAGCGACAACCTCTACTC
CTACCAGGCGAGTATCCTCTCCCCACCCATCCATAATATTCACATAATAA
CCCTCACAATACAGATAATCTTCATGTTCTGCGGTCTCCTCACCGTCGCC
TACTCAACCCTAGTCCTAATCTTCATGCCCGACTCCCCCATGGAAGCCAA
GTTCCTCTCTGAACGCGAGAAAGTGATCGCCGTGGAACGTCTCCGAGCCA
ATCAGATGGGCATCATCTCGCGCGAATGGCGATGGGATCACGTCTGGGAG
ACGGCATACGACGTGAAGACGTGGCTGTGGTTTTTTCTCATCGTGACTAT
CTCGTGCGTACATACCCCCCCCAATAGCTCACAGCAGTATCTAACTTCGA
ATACAGTATCCCCAGCGGCGGTATCAGCACATTCGGCAACCTCATCATCA
AGTCCTTCGGCTACGGATCGTTCGAAACGATCCTCTTCAACATCCCCTTC
GGCGCTATTCAGGTCATCGCCATCCTAGGCGGAGGGTGGCTGGCCACGCG
GTTCCAGCGGAAGGGGCTCGTGATTGCCTTGTTTGCGGGGATTTCTGCCA
TTGGGACGTTATTGATGATCGTTGTGCCAAGAGAGCAGAAGGGTGTTCTT
TTGTTTGGATATTACTTGGTATGTTTCCTCTATTTCTCTCGCAGGCTAGA
CGGATCATATTGATGATATATATGCACAGGTCTCCTGTCTTGCGGCCATA
ACGCCCCTCGTCTACGCCTGGGAAGCGCAAAACACTGCCGGGGATACGAA
GAGAAAGTGCACTTCAGCCGTGGTGTTGATTGGGATGTGTGCTGGTAATG
TAGGCTCTTACCCCTCTTTGGTATATAATTCTGGCCTTATCTAATGCGAC
CAGGTCATTGGCCCCCAACTCTACTCCACCTCCCAAGCACCGCTATATCG
ACCGGGCCTTATATCCAATCTTATCCTGTTCGTGTTGGTCGCGGTCTTTG
CTATGTACGTTCTATCCTTCCTTATCATATGGAAGAGGATGAAAGGAGTT
CGCTGACCCGCACAGACTGGCTAATTTATATCTCATTTATCTGAATCGGA
AGCATGCACGACGGAGGACGGAACTGGGCAAGTCGGCTCAGATTGTCGAT
GAGTCCATGCTTAGGAAGAAGGCTGTGGAGCAGGGGAAGGTACTTGAGGT
GGA back to topCoding sequence (CDS) from alignment at ch6:1177973..1180075+ >KJC3_008175-T1 ID=KJC3_008175-T1|Name=KJC3_008175-T1|organism=Aspergillus niger KJC3|type=CDS|length=7884bp|location=Sequence derived from alignment at ch6:1177973..1180075+ (Aspergillus niger KJC3) ATGGCGACCCGGGCAGAAGAATCCCACGATGCCATCACGGCCGTGGACAC CCTGGCCCATGGCACAGGGAGAGAGAAGGCAGCGGACTTCCTAGCCACCG TCAAAGAGGAAGAACGGACATTCAGCCCAGAAGAAGAAAAGCGCGTTCTT AGACGCATCGATCTCCGTATACTGCCTCTTCTGCTAGGAGCATACTTCTT CCAACAACTGGACAAATCAACGCTGTCGTACGTGTCCATTTTTGGCCTCG TCGAGGATGCACATCTGCACGGCCAGCAGTACTCATGGCTTGGATCTATT CTGTATCTTGCCCAACTTGTGGTGCAACCACTTGCTGCCTTGCTACTTGT AAAGGCCCCAACAGGGAAAGTCATCGGAACCGCGGTGCTGCTATGGGGAA GTTCGCTGGCCATCATGGCAGCGTGCACGGACTTTGCCAGCCTACTAGGG CTACGACTAACCTTGGGGACATTTGAGGCTATGATAGCACCCTCATGTGT GGCCGTCACACAAATGTGGTGGCGTCGAGGCGAGCAGACCCTTCGGACGG CGATATGGAACGCGATGAACGGGGTCACCTTTATAGTCGGAAGTCTATTC ACGTACGGACTCGGCCACATCTACAGCGACAACCTCTACTCCTACCAGAT AATCTTCATGTTCTGCGGTCTCCTCACCGTCGCCTACTCAACCCTAGTCC TAATCTTCATGCCCGACTCCCCCATGGAAGCCAAGTTCCTCTCTGAACGC GAGAAAGTGATCGCCGTGGAACGTCTCCGAGCCAATCAGATGGGCATCAT CTCGCGCGAATGGCGATGGGATCACGTCTGGGAGACGGCATACGACGTGA AGACGTGGCTGTGGTTTTTTCTCATCGTGACTATCTCTATCCCCAGCGGC GGTATCAGCACATTCGGCAACCTCATCATCAAGTCCTTCGGCTACGGATC GTTCGAAACGATCCTCTTCAACATCCCCTTCGGCGCTATTCAGGTCATCG CCATCCTAGGCGGAGGGTGGCTGGCCACGCGGTTCCAGCGGAAGGGGCTC GTGATTGCCTTGTTTGCGGGGATTTCTGCCATTGGGACGTTATTGATGAT CGTTGTGCCAAGAGAGCAGAAGGGTGTTCTTTTGTTTGGATATTACTTGG TCTCCTGTCTTGCGGCCATAACGCCCCTCGTCTACGCCTGGGAAGCGCAA AACACTGCCGGGGATACGAAGAGAAAGTGCACTTCAGCCGTGGTGTTGAT TGGGATGTGTGCTGGTAATGTAGGCTCTTACCCCTCTTTGGTATATAATT CTGGCCTTATCTAAATGGCGACCCGGGCAGAAGAATCCCACGATGCCATC ACGGCCGTGGACACCCTGGCCCATGGCACAGGGAGAGAGAAGGCAGCGGA CTTCCTAGCCACCGTCAAAGAGGAAGAACGGACATTCAGCCCAGAAGAAG AAAAGCGCGTTCTTAGACGCATCGATCTCCGTATACTGCCTCTTCTGCTA GGAGCATACTTCTTCCAACAACTGGACAAATCAACGCTGTCGTACGTGTC CATTTTTGGCCTCGTCGAGGATGCACATCTGCACGGCCAGCAGTACTCAT GGCTTGGATCTATTCTGTATCTTGCCCAACTTGTGGTGCAACCACTTGCT GCCTTGCTACTTGTAAAGGCCCCAACAGGGAAAGTCATCGGAACCGCGGT GCTGCTATGGGGAAGTTCGCTGGCCATCATGGCAGCGTGCACGGACTTTG CCAGCCTACTAGGGCTACGACTAACCTTGGGGACATTTGAGGCTATGATA GCACCCTCATGTGTGGCCGTCACACAAATGTGGTGGCGTCGAGGCGAGCA GACCCTTCGGACGGCGATATGGAACGCGATGAACGGGGTCACCTTTATAG TCGGAAGTCTATTCACGTACGGACTCGGCCACATCTACAGCGACAACCTC TACTCCTACCAGATAATCTTCATGTTCTGCGGTCTCCTCACCGTCGCCTA CTCAACCCTAGTCCTAATCTTCATGCCCGACTCCCCCATGGAAGCCAAGT TCCTCTCTGAACGCGAGAAAGTGATCGCCGTGGAACGTCTCCGAGCCAAT CAGATGGGCATCATCTCGCGCGAATGGCGATGGGATCACGTCTGGGAGAC GGCATACGACGTGAAGACGTGGCTGTGGTTTTTTCTCATCGTGACTATCT CTATCCCCAGCGGCGGTATCAGCACATTCGGCAACCTCATCATCAAGTCC TTCGGCTACGGATCGTTCGAAACGATCCTCTTCAACATCCCCTTCGGCGC TATTCAGGTCATCGCCATCCTAGGCGGAGGGTGGCTGGCCACGCGGTTCC AGCGGAAGGGGCTCGTGATTGCCTTGTTTGCGGGGATTTCTGCCATTGGG ACGTTATTGATGATCGTTGTGCCAAGAGAGCAGAAGGGTGTTCTTTTGTT TGGATATTACTTGGTCTCCTGTCTTGCGGCCATAACGCCCCTCGTCTACG CCTGGGAAGCGCAAAACACTGCCGGGGATACGAAGAGAAAGTGCACTTCA GCCGTGGTGTTGATTGGGATGTGTGCTGGTAATGTAGGCTCTTACCCCTC TTTGGTATATAATTCTGGCCTTATCTAAATGGCGACCCGGGCAGAAGAAT CCCACGATGCCATCACGGCCGTGGACACCCTGGCCCATGGCACAGGGAGA GAGAAGGCAGCGGACTTCCTAGCCACCGTCAAAGAGGAAGAACGGACATT CAGCCCAGAAGAAGAAAAGCGCGTTCTTAGACGCATCGATCTCCGTATAC TGCCTCTTCTGCTAGGAGCATACTTCTTCCAACAACTGGACAAATCAACG CTGTCGTACGTGTCCATTTTTGGCCTCGTCGAGGATGCACATCTGCACGG CCAGCAGTACTCATGGCTTGGATCTATTCTGTATCTTGCCCAACTTGTGG TGCAACCACTTGCTGCCTTGCTACTTGTAAAGGCCCCAACAGGGAAAGTC ATCGGAACCGCGGTGCTGCTATGGGGAAGTTCGCTGGCCATCATGGCAGC GTGCACGGACTTTGCCAGCCTACTAGGGCTACGACTAACCTTGGGGACAT TTGAGGCTATGATAGCACCCTCATGTGTGGCCGTCACACAAATGTGGTGG CGTCGAGGCGAGCAGACCCTTCGGACGGCGATATGGAACGCGATGAACGG GGTCACCTTTATAGTCGGAAGTCTATTCACGTACGGACTCGGCCACATCT ACAGCGACAACCTCTACTCCTACCAGATAATCTTCATGTTCTGCGGTCTC CTCACCGTCGCCTACTCAACCCTAGTCCTAATCTTCATGCCCGACTCCCC CATGGAAGCCAAGTTCCTCTCTGAACGCGAGAAAGTGATCGCCGTGGAAC GTCTCCGAGCCAATCAGATGGGCATCATCTCGCGCGAATGGCGATGGGAT CACGTCTGGGAGACGGCATACGACGTGAAGACGTGGCTGTGGTTTTTTCT CATCGTGACTATCTCTATCCCCAGCGGCGGTATCAGCACATTCGGCAACC TCATCATCAAGTCCTTCGGCTACGGATCGTTCGAAACGATCCTCTTCAAC ATCCCCTTCGGCGCTATTCAGGTCATCGCCATCCTAGGCGGAGGGTGGCT GGCCACGCGGTTCCAGCGGAAGGGGCTCGTGATTGCCTTGTTTGCGGGGA TTTCTGCCATTGGGACGTTATTGATGATCGTTGTGCCAAGAGAGCAGAAG GGTGTTCTTTTGTTTGGATATTACTTGGTCTCCTGTCTTGCGGCCATAAC GCCCCTCGTCTACGCCTGGGAAGCGCAAAACACTGCCGGGGATACGAAGA GAAAGTGCACTTCAGCCGTGGTGTTGATTGGGATGTGTGCTGGTAATGTA GGCTCTTACCCCTCTTTGGTATATAATTCTGGCCTTATCTAAATGGCGAC CCGGGCAGAAGAATCCCACGATGCCATCACGGCCGTGGACACCCTGGCCC ATGGCACAGGGAGAGAGAAGGCAGCGGACTTCCTAGCCACCGTCAAAGAG GAAGAACGGACATTCAGCCCAGAAGAAGAAAAGCGCGTTCTTAGACGCAT CGATCTCCGTATACTGCCTCTTCTGCTAGGAGCATACTTCTTCCAACAAC TGGACAAATCAACGCTGTCGTACGTGTCCATTTTTGGCCTCGTCGAGGAT GCACATCTGCACGGCCAGCAGTACTCATGGCTTGGATCTATTCTGTATCT TGCCCAACTTGTGGTGCAACCACTTGCTGCCTTGCTACTTGTAAAGGCCC CAACAGGGAAAGTCATCGGAACCGCGGTGCTGCTATGGGGAAGTTCGCTG GCCATCATGGCAGCGTGCACGGACTTTGCCAGCCTACTAGGGCTACGACT AACCTTGGGGACATTTGAGGCTATGATAGCACCCTCATGTGTGGCCGTCA CACAAATGTGGTGGCGTCGAGGCGAGCAGACCCTTCGGACGGCGATATGG AACGCGATGAACGGGGTCACCTTTATAGTCGGAAGTCTATTCACGTACGG ACTCGGCCACATCTACAGCGACAACCTCTACTCCTACCAGATAATCTTCA TGTTCTGCGGTCTCCTCACCGTCGCCTACTCAACCCTAGTCCTAATCTTC ATGCCCGACTCCCCCATGGAAGCCAAGTTCCTCTCTGAACGCGAGAAAGT GATCGCCGTGGAACGTCTCCGAGCCAATCAGATGGGCATCATCTCGCGCG AATGGCGATGGGATCACGTCTGGGAGACGGCATACGACGTGAAGACGTGG CTGTGGTTTTTTCTCATCGTGACTATCTCTATCCCCAGCGGCGGTATCAG CACATTCGGCAACCTCATCATCAAGTCCTTCGGCTACGGATCGTTCGAAA CGATCCTCTTCAACATCCCCTTCGGCGCTATTCAGGTCATCGCCATCCTA GGCGGAGGGTGGCTGGCCACGCGGTTCCAGCGGAAGGGGCTCGTGATTGC CTTGTTTGCGGGGATTTCTGCCATTGGGACGTTATTGATGATCGTTGTGC CAAGAGAGCAGAAGGGTGTTCTTTTGTTTGGATATTACTTGGTCTCCTGT CTTGCGGCCATAACGCCCCTCGTCTACGCCTGGGAAGCGCAAAACACTGC CGGGGATACGAAGAGAAAGTGCACTTCAGCCGTGGTGTTGATTGGGATGT GTGCTGGTAATGTAGGCTCTTACCCCTCTTTGGTATATAATTCTGGCCTT ATCTAAATGGCGACCCGGGCAGAAGAATCCCACGATGCCATCACGGCCGT GGACACCCTGGCCCATGGCACAGGGAGAGAGAAGGCAGCGGACTTCCTAG CCACCGTCAAAGAGGAAGAACGGACATTCAGCCCAGAAGAAGAAAAGCGC GTTCTTAGACGCATCGATCTCCGTATACTGCCTCTTCTGCTAGGAGCATA CTTCTTCCAACAACTGGACAAATCAACGCTGTCGTACGTGTCCATTTTTG GCCTCGTCGAGGATGCACATCTGCACGGCCAGCAGTACTCATGGCTTGGA TCTATTCTGTATCTTGCCCAACTTGTGGTGCAACCACTTGCTGCCTTGCT ACTTGTAAAGGCCCCAACAGGGAAAGTCATCGGAACCGCGGTGCTGCTAT GGGGAAGTTCGCTGGCCATCATGGCAGCGTGCACGGACTTTGCCAGCCTA CTAGGGCTACGACTAACCTTGGGGACATTTGAGGCTATGATAGCACCCTC ATGTGTGGCCGTCACACAAATGTGGTGGCGTCGAGGCGAGCAGACCCTTC GGACGGCGATATGGAACGCGATGAACGGGGTCACCTTTATAGTCGGAAGT CTATTCACGTACGGACTCGGCCACATCTACAGCGACAACCTCTACTCCTA CCAGATAATCTTCATGTTCTGCGGTCTCCTCACCGTCGCCTACTCAACCC TAGTCCTAATCTTCATGCCCGACTCCCCCATGGAAGCCAAGTTCCTCTCT GAACGCGAGAAAGTGATCGCCGTGGAACGTCTCCGAGCCAATCAGATGGG CATCATCTCGCGCGAATGGCGATGGGATCACGTCTGGGAGACGGCATACG ACGTGAAGACGTGGCTGTGGTTTTTTCTCATCGTGACTATCTCTATCCCC AGCGGCGGTATCAGCACATTCGGCAACCTCATCATCAAGTCCTTCGGCTA CGGATCGTTCGAAACGATCCTCTTCAACATCCCCTTCGGCGCTATTCAGG TCATCGCCATCCTAGGCGGAGGGTGGCTGGCCACGCGGTTCCAGCGGAAG GGGCTCGTGATTGCCTTGTTTGCGGGGATTTCTGCCATTGGGACGTTATT GATGATCGTTGTGCCAAGAGAGCAGAAGGGTGTTCTTTTGTTTGGATATT ACTTGGTCTCCTGTCTTGCGGCCATAACGCCCCTCGTCTACGCCTGGGAA GCGCAAAACACTGCCGGGGATACGAAGAGAAAGTGCACTTCAGCCGTGGT GTTGATTGGGATGTGTGCTGGTAATGTAGGCTCTTACCCCTCTTTGGTAT ATAATTCTGGCCTTATCTAAATGGCGACCCGGGCAGAAGAATCCCACGAT GCCATCACGGCCGTGGACACCCTGGCCCATGGCACAGGGAGAGAGAAGGC AGCGGACTTCCTAGCCACCGTCAAAGAGGAAGAACGGACATTCAGCCCAG AAGAAGAAAAGCGCGTTCTTAGACGCATCGATCTCCGTATACTGCCTCTT CTGCTAGGAGCATACTTCTTCCAACAACTGGACAAATCAACGCTGTCGTA CGTGTCCATTTTTGGCCTCGTCGAGGATGCACATCTGCACGGCCAGCAGT ACTCATGGCTTGGATCTATTCTGTATCTTGCCCAACTTGTGGTGCAACCA CTTGCTGCCTTGCTACTTGTAAAGGCCCCAACAGGGAAAGTCATCGGAAC CGCGGTGCTGCTATGGGGAAGTTCGCTGGCCATCATGGCAGCGTGCACGG ACTTTGCCAGCCTACTAGGGCTACGACTAACCTTGGGGACATTTGAGGCT ATGATAGCACCCTCATGTGTGGCCGTCACACAAATGTGGTGGCGTCGAGG CGAGCAGACCCTTCGGACGGCGATATGGAACGCGATGAACGGGGTCACCT TTATAGTCGGAAGTCTATTCACGTACGGACTCGGCCACATCTACAGCGAC AACCTCTACTCCTACCAGATAATCTTCATGTTCTGCGGTCTCCTCACCGT CGCCTACTCAACCCTAGTCCTAATCTTCATGCCCGACTCCCCCATGGAAG CCAAGTTCCTCTCTGAACGCGAGAAAGTGATCGCCGTGGAACGTCTCCGA GCCAATCAGATGGGCATCATCTCGCGCGAATGGCGATGGGATCACGTCTG GGAGACGGCATACGACGTGAAGACGTGGCTGTGGTTTTTTCTCATCGTGA CTATCTCTATCCCCAGCGGCGGTATCAGCACATTCGGCAACCTCATCATC AAGTCCTTCGGCTACGGATCGTTCGAAACGATCCTCTTCAACATCCCCTT CGGCGCTATTCAGGTCATCGCCATCCTAGGCGGAGGGTGGCTGGCCACGC GGTTCCAGCGGAAGGGGCTCGTGATTGCCTTGTTTGCGGGGATTTCTGCC ATTGGGACGTTATTGATGATCGTTGTGCCAAGAGAGCAGAAGGGTGTTCT TTTGTTTGGATATTACTTGGTCTCCTGTCTTGCGGCCATAACGCCCCTCG TCTACGCCTGGGAAGCGCAAAACACTGCCGGGGATACGAAGAGAAAGTGC ACTTCAGCCGTGGTGTTGATTGGGATGTGTGCTGGTAATGTAGGCTCTTA CCCCTCTTTGGTATATAATTCTGGCCTTATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:1177973..1180075 + |
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