|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1184594..1187120+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008177-T1 ID=KJC3_008177-T1|Name=KJC3_008177-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2527bp|location=Sequence derived from alignment at ch6:1184594..1187120+ (Aspergillus niger KJC3)
TCCTCTTCTTCCTCTCTCTTTCTCCTTCTTCTTCAATCATCTCTCTCTCT
CTCTAACTCAGAACTCGGTTTATTCCTTGTTCATTCCATTCTTTCTTACA
CTCCCTCTTCTCGCTCTCAGCTCTCTGTGTAGCGTATCACTCTCTTTCCC
TACCTCACCCACTCTTTGATAATCCCTTACGTTCTTTTTTTTCACGACCG
TCACCATGCTCTCCAAGATGCAGCTCGCCCAGCTGGCCGCCTTCGCCATG
ACCCTGGCCACCTCCGAGGCCGCCTACCAGGGTTTCAACTACGGCAACAA
GTTCTCCGATGAGAGCTCCAAGTTCCAGGCCGACTTCGAGGCCGAGTTCA
AGGCCGCCAAGAACCTCGTCGGCACCTCCGGCTTCACCTCCGCCCGTCTC
TACACCATGATCGTACGTTTTACCCCCAATCAAAAAGATGGATCATCACA
ATGATGGTGCAAGTTACTCACTCGCCGATAGCAAGCCTACTCCACCAGCG
ATGTCATCGAGGCCATCCCCGCCGCCATTGCCCAGGATACTTCCCTTTTG
CTCGGTCTCTGGGCCTCCGGTGGTGGCATGGACAACGAGATCACCGCCCT
GAAGACCGCCATCTCTCAGTACGGTGAGGAGCTCGGCAAGCTCGTCGTCG
GTATCTCCGTCGGCAGTGAGGATCTCTACCGCAACTCCGTCGAGGGTGCC
GAGGCCGATGCCGGTGTTGGTGTCAACCCCGACGAGCTCGTCGAGTACAT
CAAGGAGGTCCGCTCCGTCATCGCCGGCACCGCCCTCGCCGACGTCTCCA
TCGGTCACGTCGACACCTGGGACTCCTGGACCAACAGCTCCAACTCGGCC
GTCGTCGAGGCCGTCGACTGGCTGGGCTTTGACGGCTACCCCTTCTTCCA
GAGCTCCATGGCCAACTCCATCGACAACGCCAAGACCCTCTTCGAGGAGT
CGGTCGCCAAGACCAAGGCGGTTGCCGGTGACAAGGAGGTCTGGATCACT
GAGACTGGTTGGCCCGTCAGCGGTGACTCCCAAGGTGACGCCGTCGCCTC
CATCGCCAATGCTAAGACTTTCTGGGATGAGGTTGGCTGCCCTCTCTTCG
GCAACGTGAACACCTGGTGGTACATCCTGCAGGATGCCTCCCCCACCACC
CCCAACCCCAGCTTCGGTATCGTCGGCAGCACTCTCTCCACCACTCCCCT
GTTCGACCTGTCCTGCAAGAACTCCACCACCTCCTCCTCGTCCGCCGTTG
TTTCTGCCGCTGCTTCTTCCGCCGCCGGTAGCAAGGCCGTTGGTTCTTCC
CAGGCCTCTTCTGGTGCCGCTGCCTGGGCCACCTCCGCCTCCGGCTCTGC
TAAGCCCACCTTCACCGTTGGCCGCCCCGGTGTGAACGGCACTGTCTTCG
GTAACGGCACCTACCCCCTCCGCCCCAGCGGTTCCGCCTCTGCTCGTCCC
TCCGCCGGTGCCATCTCCAGCGGCTCGGGCTCCAGCTCCAGCGGTTCGGG
CAGCTCTGGTAGCACCGGCACCTCGGCCACCTCCGGCCAGTCCTCCTCTT
CCGGCAGCTCTGCGGCCGCTGGCTCTTCCTCCCCCGCTGCCTTCAGCGGT
GCCAGCACCCTCTCCGGCTCCCTCTTCGGTGCCGTGGTGGCCGTCTTCAT
GACCCTGGCTGCTTTGTAAGGAAATGAACGGATGACACGGGTTTCCCCCC
CTCCCCGCCAACCCTCTTCTCTGGGTGATTGGAGTTTCTCTCGTTTTTTT
GGGTAGCCCCGATTTTGTGTTCCGGTGTTCTTTTTCGGTCGACTTTTCCC
TTCTTGATACATATTTTATATTCCCTCAAAACTTCTTGTGTGCTTGCCAT
GGTTTGGCCCGGATGATAGACAAATGTTAATTTAGACTTGAGATCTTTCC
ATCCAGCTGCATGATCAAGCGCATTGCAATCGACCGAATTGTGGAATCTT
GTAATGTAATCGATACCCTACTACTCAACCAGTAAAATCCTTGACCGGTC
CGGATATATCATCTTCGTTCGGATATTGCCATACGCGCAGCTACTGCCAA
AGGCATCTACGTCCCTCCGGATGTTCCCATGGAGGTCACATCTTTGCTTC
CCGTGTAGTATCAGGTAACCTTGCTGCTGATGTCGTTGATCCCCTTGCCA
GGACGCTTCCTTACCGTGCTGCGGACTGCGCTATACCAGTATTTAGCCAA
TCTTCGTTATATGTCTCAACGGAATGGATAGATGCATAATAGACAGACGC
TCTTCGTTCAATACTTTATTTGCATATTTGATCATGAGAAATGGCAGTGG
ATTTGGTTCATCGTTCACTACAGTAAGTTCATTTCGTGCATAAACTCAGT
TCAACTTGGGAGTAGTAGTATTGATGAAGCCGGATATATATATAGTAGGG
TGAAACAAACATCAGGTCTCCATGACATGAGAATCTCACTGGTGGTTCTT
TTTACGTACTATTGCACATTTCTGCAAAGTAAAACGACAAATTAAGAATC
TATTGCCGGTAGCAAATTCCTATTAGA back to topCoding sequence (CDS) from alignment at ch6:1184594..1187120+ >KJC3_008177-T1 ID=KJC3_008177-T1|Name=KJC3_008177-T1|organism=Aspergillus niger KJC3|type=CDS|length=1092bp|location=Sequence derived from alignment at ch6:1184594..1187120+ (Aspergillus niger KJC3)
ATGGACAACGAGATCACCGCCCTGAAGACCGCCATCTCTCAGTACGGTGA
GGAGCTCGGCAAGCTCGTCGTCGGTATCTCCGTCGGCAGTGAGGATCTCT
ACCGCAACTCCGTCGAGGGTGCCGAGGCCGATGCCGGTGTTGGTGTCAAC
CCCGACGAGCTCGTCGAGTACATCAAGGAGGTCCGCTCCGTCATCGCCGG
CACCGCCCTCGCCGACGTCTCCATCGGTCACGTCGACACCTGGGACTCCT
GGACCAACAGCTCCAACTCGGCCGTCGTCGAGGCCGTCGACTGGCTGGGC
TTTGACGGCTACCCCTTCTTCCAGAGCTCCATGGCCAACTCCATCGACAA
CGCCAAGACCCTCTTCGAGGAGTCGGTCGCCAAGACCAAGGCGGTTGCCG
GTGACAAGGAGGTCTGGATCACTGAGACTGGTTGGCCCGTCAGCGGTGAC
TCCCAAGGTGACGCCGTCGCCTCCATCGCCAATGCTAAGACTTTCTGGGA
TGAGGTTGGCTGCCCTCTCTTCGGCAACGTGAACACCTGGTGGTACATCC
TGCAGGATGCCTCCCCCACCACCCCCAACCCCAGCTTCGGTATCGTCGGC
AGCACTCTCTCCACCACTCCCCTGTTCGACCTGTCCTGCAAGAACTCCAC
CACCTCCTCCTCGTCCGCCGTTGTTTCTGCCGCTGCTTCTTCCGCCGCCG
GTAGCAAGGCCGTTGGTTCTTCCCAGGCCTCTTCTGGTGCCGCTGCCTGG
GCCACCTCCGCCTCCGGCTCTGCTAAGCCCACCTTCACCGTTGGCCGCCC
CGGTGTGAACGGCACTGTCTTCGGTAACGGCACCTACCCCCTCCGCCCCA
GCGGTTCCGCCTCTGCTCGTCCCTCCGCCGGTGCCATCTCCAGCGGCTCG
GGCTCCAGCTCCAGCGGTTCGGGCAGCTCTGGTAGCACCGGCACCTCGGC
CACCTCCGGCCAGTCCTCCTCTTCCGGCAGCTCTGCGGCCGCTGGCTCTT
CCTCCCCCGCTGCCTTCAGCGGTGCCAGCACCCTCTCCGGCTCCCTCTTC
GGTGCCGTGGTGGCCGTCTTCATGACCCTGGCTGCTTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008177-T1.utr5p1 | KJC3_008177-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR000490 |
| DBxref | PFAM:PF00332 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1184594..1187120 + |
|
