You are here

Home

KJC3_008178-T1, KJC3_008178-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008178-T1
Unique NameKJC3_008178-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1188988..1190700+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008178-T1 ID=KJC3_008178-T1|Name=KJC3_008178-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1713bp|location=Sequence derived from alignment at ch6:1188988..1190700+ (Aspergillus niger KJC3)
ATGTCCAAGTTCCTCCTCTGGACCGTCTCTGCGGCGGCCCTCGCGCGCGC
CGCGACTCTTGAAGATGTCTGTACCACTGCTCATGCGAAGGCCGCTGTGC
CTGTCTCCGGCCTGGTGCAGGGAGTGGTCACCAACCCTTCCAGTATCACC
GCGGCCCCCGTTTACAATGAATCCACCGCCGGTTCCGACTACTACCCGGC
CGGTACCTATGATTACTGCAATATCACCATGACTTATTCTCATGCGGGCA
AGGACGATAGCGTCCTGCTGCAATTCTGGATGCCCACTCCTGACGACTTC
CAGAACCGCTGGGTGTCCACCGGTGGCTTTGGCTTTGCCATCAACGTTGC
CTCCAACGTGCCTGCTGGTCTTCCCTACGGTGCCGTCGCCGGCCGGACCG
ACGGTGGCTTTGGCAGCTTCGACACCCAATTCTCTTCTGTGTACCCCCTG
GTGAACGGTACCGCCAACTACGACGCTCTGTACATGTTCGGCTACCAGGC
TCACCACGAGATGTCCTCCATCGGCAAGGCCTTCACCAAGAACTTCTACA
GCATGTCCGACAAGCTCTACGCCTACTACCAGGGCTGCTCCGAGGGTGGC
CGTGAGGGCTGGAGTCAGGTGCAGCGCTTCCCCGAGGAGTGGGATGGTGC
CGTCATTGGTGCCCCTGCCATCCGTTATGGCCAGCAGCAGGTGAACCACC
TGGTGCCCCAGGTCGTCGAGCAGACCCTCGACTACTACCCTGAGAACTGC
GAGTTCTCTGAGATGGTGACTCTGATCATCGACGCTTGTGATGAGCTCGA
TGGCCGCAAGGACGGCGTCATCTCCCGCACGGATCTCTGCCAGCTCAACT
TCGACCTCAAGTCGACCATCGGTAAGCCCTACGCCTGCAACGCCAGTACC
AGCATGGGTGTGACTACCCCGGCCCAGAACGGCACCATCACTGCTGAGGG
TGTGCGCGTCGCCCAAACCATTCTGGACGGACTGAAGGACTCTGAGGGTC
GCCAGGCCTACTTCTGGTACCGCATTGGCTCCGAGTTCACCGACGCAGAG
ACCTCGTACGATTCGACCACCGGCACCTACGGGATTGACATCTCTGAGCT
GGGTGGTGAGTGGGTGACTCACGGACTGCAGCTGCTGGATCTTGACAACC
TCTCGAACCTGGACAACGTCACCTACGACACCCTGCGTGACTGGATGCTC
GAGGGTCTCCAGCGCTACGAGGATGTCCTGCAGACCACTTGGCCCGATCT
GTCCCGCTTCCAGGCTGCCGGTGGTAAGGTGATCCACTACCACGGCGAAT
CGGACAACAGCATCCCTCCTGCCTCTTCGGTGCGTTACTTCGAGTCCGTC
CGCGACACCATGTTCCCCAACAAGACCTACAACGCCTCGGTCGAAGCCCT
GAACGAGTTCTACCGCCTCTACTTGGTCCCCGGTGCCTCCCACTGCAACA
CCAACTCCCTGCAGCCCAATGGTCCTTACCCCCAGAACTCTCTCGGCGAT
CTGATGAACTGGGTCGAGAAGGGCATTGAGCCGGTGACTCTGAACGGAAC
GGTGTTGAGCGGCGACTACGAGGGAGAGGAGCAGAAGATCTGCTCGTGGC
CTCTGCGTCCTCTGTGGAAGAACAACGGCACGGTCATGGACTGCGTGTAC
GACCAGAAGTCGATTGACACCTGGTTGTATGATCTGGATGCGTATGACAT
TCCGATCTACTAG
back to top

Coding sequence (CDS) from alignment at ch6:1188988..1190700+

>KJC3_008178-T1 ID=KJC3_008178-T1|Name=KJC3_008178-T1|organism=Aspergillus niger KJC3|type=CDS|length=1713bp|location=Sequence derived from alignment at ch6:1188988..1190700+ (Aspergillus niger KJC3)
ATGTCCAAGTTCCTCCTCTGGACCGTCTCTGCGGCGGCCCTCGCGCGCGC
CGCGACTCTTGAAGATGTCTGTACCACTGCTCATGCGAAGGCCGCTGTGC
CTGTCTCCGGCCTGGTGCAGGGAGTGGTCACCAACCCTTCCAGTATCACC
GCGGCCCCCGTTTACAATGAATCCACCGCCGGTTCCGACTACTACCCGGC
CGGTACCTATGATTACTGCAATATCACCATGACTTATTCTCATGCGGGCA
AGGACGATAGCGTCCTGCTGCAATTCTGGATGCCCACTCCTGACGACTTC
CAGAACCGCTGGGTGTCCACCGGTGGCTTTGGCTTTGCCATCAACGTTGC
CTCCAACGTGCCTGCTGGTCTTCCCTACGGTGCCGTCGCCGGCCGGACCG
ACGGTGGCTTTGGCAGCTTCGACACCCAATTCTCTTCTGTGTACCCCCTG
GTGAACGGTACCGCCAACTACGACGCTCTGTACATGTTCGGCTACCAGGC
TCACCACGAGATGTCCTCCATCGGCAAGGCCTTCACCAAGAACTTCTACA
GCATGTCCGACAAGCTCTACGCCTACTACCAGGGCTGCTCCGAGGGTGGC
CGTGAGGGCTGGAGTCAGGTGCAGCGCTTCCCCGAGGAGTGGGATGGTGC
CGTCATTGGTGCCCCTGCCATCCGTTATGGCCAGCAGCAGGTGAACCACC
TGGTGCCCCAGGTCGTCGAGCAGACCCTCGACTACTACCCTGAGAACTGC
GAGTTCTCTGAGATGGTGACTCTGATCATCGACGCTTGTGATGAGCTCGA
TGGCCGCAAGGACGGCGTCATCTCCCGCACGGATCTCTGCCAGCTCAACT
TCGACCTCAAGTCGACCATCGGTAAGCCCTACGCCTGCAACGCCAGTACC
AGCATGGGTGTGACTACCCCGGCCCAGAACGGCACCATCACTGCTGAGGG
TGTGCGCGTCGCCCAAACCATTCTGGACGGACTGAAGGACTCTGAGGGTC
GCCAGGCCTACTTCTGGTACCGCATTGGCTCCGAGTTCACCGACGCAGAG
ACCTCGTACGATTCGACCACCGGCACCTACGGGATTGACATCTCTGAGCT
GGGTGGTGAGTGGGTGACTCACGGACTGCAGCTGCTGGATCTTGACAACC
TCTCGAACCTGGACAACGTCACCTACGACACCCTGCGTGACTGGATGCTC
GAGGGTCTCCAGCGCTACGAGGATGTCCTGCAGACCACTTGGCCCGATCT
GTCCCGCTTCCAGGCTGCCGGTGGTAAGGTGATCCACTACCACGGCGAAT
CGGACAACAGCATCCCTCCTGCCTCTTCGGTGCGTTACTTCGAGTCCGTC
CGCGACACCATGTTCCCCAACAAGACCTACAACGCCTCGGTCGAAGCCCT
GAACGAGTTCTACCGCCTCTACTTGGTCCCCGGTGCCTCCCACTGCAACA
CCAACTCCCTGCAGCCCAATGGTCCTTACCCCCAGAACTCTCTCGGCGAT
CTGATGAACTGGGTCGAGAAGGGCATTGAGCCGGTGACTCTGAACGGAAC
GGTGTTGAGCGGCGACTACGAGGGAGAGGAGCAGAAGATCTGCTCGTGGC
CTCTGCGTCCTCTGTGGAAGAACAACGGCACGGTCATGGACTGCGTGTAC
GACCAGAAGTCGATTGACACCTGGTTGTATGATCTGGATGCGTATGACAT
TCCGATCTACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008178KJC3_008178Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008178-T1.exon1KJC3_008178-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008178-T1.cdsKJC3_008178-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008178-T1KJC3_008178-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR011118
DBxrefPFAM:PF07519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1188988..1190700 +
Powered by Drupal