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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1190927..1192651+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008179-T1 ID=KJC3_008179-T1|Name=KJC3_008179-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1725bp|location=Sequence derived from alignment at ch6:1190927..1192651+ (Aspergillus niger KJC3)
CCCACCATCACAACACTAAAGACAAAAACATGAAAATCATCATCATCGGC
GCCGGTATCTCCGGCTGCGCCGCATATCTCACCCTCCGGAAACATCTCCC
ACCACCACCCCCATCATCCTCACCCACCCAAGACCACGAATACACCATCT
ACGAAGCATACCCCACCACCATCGACACCACCTCTGACGACCGCCCCAAT
GACGAACACAGCACCCACTCCGCAACCCTAACCATAGGCGGCGGGCTCGG
CGTAGCCCCCAACGGCCTCCGCGTACTCGAACGCCTCGACGAGGACATTC
TCCGCGACGCAGTCAGCGGCGGATACATGGTCGACCACAGCAACCTGAAA
GACAAACACGGCCGGGTGTTGATGCGACTCCCTTCATCCAGCACCACCAC
CACCGGCAGCAGGGACAGCGATGGAACTACTACTACCCCAATGCACCTCC
TCGGCACAAGCCGACATAACATCTGGCGATGTCTGCGCAAACGCATCCCA
GACAGCATCATCATCAATAAGCGAGTAGCGAGTGTAACCGCGCACCCTAC
CCACCGCAACACAGTCACCTTCGTTGATGGAAGCGAGCCCGTACACGCAG
ATCTTGTCATAGGTGCGGATGGTTTAAAGAGTGTTACTAAACACGCCCTC
TTCGATGGGGATCCGTACCCCCCTCATTACGAGTATGCATACCACCCATA
CACCATGAACATACATACTAATAATAATACTACTAAATCAGAGGCCTAAT
CGGCATCGGCGGCTTCCTCCCCACCAGCACCCTCCCACCAACCATCCCCC
GACCGGAACCAGGATCCATGAATTTCTGCTTCAGCGGAACAGGGTTTTTC
GGCTACTTCTACGCTACTAGCTCTCCTACCTCTGTTGATCGCTGCTCCGC
ATATCATATCTCCCCGCCGGGGGATACATTAGCTTGGTGGACTACATACT
CAACACCTACTTCTTCTTCTTCTTCCACCCCACCTAATACTCAAGATCTA
GATATGGATGATGTGACAGCCCAACTCCAGGACAGGTTCTCGTCATGGAC
TGATCCTCTCGTCCGTCATATTATCCGTTCTGTGCAGGTGCAGACGATGT
GGCCGACCTGGACGAGTCCGCCGCTTCCTACCTGGGAGAGGGAGGGGGTG
GTGCTGGTGGGGGATGCGGCGCATGCGTTGCCGTCGACGTCGGGACAGGG
GGCGAGCCAGGCGTTGGAGGATGTGGAGGCTTTGGGAAGGTTGGTGGCGC
ATGAGGTGGGGATTGGGTATCAGGAACAACTGGTGTTAGGGGTGTCTGGT
GGGGTGGAGGGAGAGAAACGGGCTATTCAGATGGCGTGTAAACGGTATGT
GGAGATGAGGATGCCGAGGGTGAGGGGGATATTGGATCGGGCGAGGGGGA
TGCAGAATAGTAAGAGGGATATGGGGGTGTTTGGGGAGTGGGTGATGTAT
TGGGTGATGTGGGTTATGGGTATGTTTTCTTTTTTTTATTTACTCCTTTT
GGTGATGTGTGTATGGGGATATGCTAATGTGTTTCGTCTGGGGGGTAGGG
TTCTTTCCAGGGTTGCTTGGGAGGCAGCAGCAGGAGGTGTTTGATTATGA
TTTGCCGGGGGATGTGGAGCGGGTGTTGGATGGAAGGTAGTAGTACTTAC
TATTCTTCGATGATATTGTGTTGATATGTAGTGTGGGAGTACAGCGCAGA
TAAAAGTATCAGGTACTAGTTACAC back to topCoding sequence (CDS) from alignment at ch6:1190927..1192651+ >KJC3_008179-T1 ID=KJC3_008179-T1|Name=KJC3_008179-T1|organism=Aspergillus niger KJC3|type=CDS|length=4419bp|location=Sequence derived from alignment at ch6:1190927..1192651+ (Aspergillus niger KJC3)
ATGAAAATCATCATCATCGGCGCCGGTATCTCCGGCTGCGCCGCATATCT
CACCCTCCGGAAACATCTCCCACCACCACCCCCATCATCCTCACCCACCC
AAGACCACGAATACACCATCTACGAAGCATACCCCACCACCATCGACACC
ACCTCTGACGACCGCCCCAATGACGAACACAGCACCCACTCCGCAACCCT
AACCATAGGCGGCGGGCTCGGCGTAGCCCCCAACGGCCTCCGCGTACTCG
AACGCCTCGACGAGGACATTCTCCGCGACGCAGTCAGCGGCGGATACATG
GTCGACCACAGCAACCTGAAAGACAAACACGGCCGGGTGTTGATGCGACT
CCCTTCATCCAGCACCACCACCACCGGCAGCAGGGACAGCGATGGAACTA
CTACTACCCCAATGCACCTCCTCGGCACAAGCCGACATAACATCTGGCGA
TGTCTGCGCAAACGCATCCCAGACAGCATCATCATCAATAAGCGAGTAGC
GAGTGTAACCGCGCACCCTACCCACCGCAACACAGTCACCTTCGTTGATG
GAAGCGAGCCCGTACACGCAGATCTTGTCATAGGTGCGGATGGTTTAAAG
AGTGTTACTAAACACGCCCTCTTCGATGGGGATCCGTACCCCCCTCATTA
CGAAGGCCTAATCGGCATCGGCGGCTTCCTCCCCACCAGCACCCTCCCAC
CAACCATCCCCCGACCGGAACCAGGATCCATGAATTTCTGCTTCAGCGGA
ACAGGGTTTTTCGGCTACTTCTACGCTACTAGCTCTCCTACCTCTGTTGA
TCGCTGCTCCGCATATCATATCTCCCCGCCGGGGGATACATTAGCTTGGT
GGACTACATACTCAACACCTACTTCTTCTTCTTCTTCCACCCCACCTAAT
ACTCAAGATCTAGATATGGATGATGTGACAGCCCAACTCCAGGACAGGTT
CTCGTCATGGACTGATCCTCTCGTCCGTCATATTATCCGTTCTGTGCAGG
TGCAGACGATGTGGCCGACCTGGACGAGTCCGCCGCTTCCTACCTGGGAG
AGGGAGGGGGTGGTGCTGGTGGGGGATGCGGCGCATGCGTTGCCGTCGAC
GTCGGGACAGGGGGCGAGCCAGGCGTTGGAGGATGTGGAGGCTTTGGGAA
GGTTGGTGGCGCATGAGGTGGGGATTGGGTATCAGGAACAACTGGTGTTA
GGGGTGTCTGGTGGGGTGGAGGGAGAGAAACGGGCTATTCAGATGGCGTG
TAAACGGTATGTGGAGATGAGGATGCCGAGGGTGAGGGGGATATTGGATC
GGGCGAGGGGGATGCAGAATAGTAAGAGGGATATGGGGGTGTTTGGGGAG
TGGGTGATGTATTGGGTGATGTGGGTTATGGGGTTCTTTCCAGGGTTGCT
TGGGAGGCAGCAGCAGGAGGTGTTTGATTATGATTTGCCGGGGGATGTGG
AGCGGGTGTTGGATGGAAGGTAGATGAAAATCATCATCATCGGCGCCGGT
ATCTCCGGCTGCGCCGCATATCTCACCCTCCGGAAACATCTCCCACCACC
ACCCCCATCATCCTCACCCACCCAAGACCACGAATACACCATCTACGAAG
CATACCCCACCACCATCGACACCACCTCTGACGACCGCCCCAATGACGAA
CACAGCACCCACTCCGCAACCCTAACCATAGGCGGCGGGCTCGGCGTAGC
CCCCAACGGCCTCCGCGTACTCGAACGCCTCGACGAGGACATTCTCCGCG
ACGCAGTCAGCGGCGGATACATGGTCGACCACAGCAACCTGAAAGACAAA
CACGGCCGGGTGTTGATGCGACTCCCTTCATCCAGCACCACCACCACCGG
CAGCAGGGACAGCGATGGAACTACTACTACCCCAATGCACCTCCTCGGCA
CAAGCCGACATAACATCTGGCGATGTCTGCGCAAACGCATCCCAGACAGC
ATCATCATCAATAAGCGAGTAGCGAGTGTAACCGCGCACCCTACCCACCG
CAACACAGTCACCTTCGTTGATGGAAGCGAGCCCGTACACGCAGATCTTG
TCATAGGTGCGGATGGTTTAAAGAGTGTTACTAAACACGCCCTCTTCGAT
GGGGATCCGTACCCCCCTCATTACGAAGGCCTAATCGGCATCGGCGGCTT
CCTCCCCACCAGCACCCTCCCACCAACCATCCCCCGACCGGAACCAGGAT
CCATGAATTTCTGCTTCAGCGGAACAGGGTTTTTCGGCTACTTCTACGCT
ACTAGCTCTCCTACCTCTGTTGATCGCTGCTCCGCATATCATATCTCCCC
GCCGGGGGATACATTAGCTTGGTGGACTACATACTCAACACCTACTTCTT
CTTCTTCTTCCACCCCACCTAATACTCAAGATCTAGATATGGATGATGTG
ACAGCCCAACTCCAGGACAGGTTCTCGTCATGGACTGATCCTCTCGTCCG
TCATATTATCCGTTCTGTGCAGGTGCAGACGATGTGGCCGACCTGGACGA
GTCCGCCGCTTCCTACCTGGGAGAGGGAGGGGGTGGTGCTGGTGGGGGAT
GCGGCGCATGCGTTGCCGTCGACGTCGGGACAGGGGGCGAGCCAGGCGTT
GGAGGATGTGGAGGCTTTGGGAAGGTTGGTGGCGCATGAGGTGGGGATTG
GGTATCAGGAACAACTGGTGTTAGGGGTGTCTGGTGGGGTGGAGGGAGAG
AAACGGGCTATTCAGATGGCGTGTAAACGGTATGTGGAGATGAGGATGCC
GAGGGTGAGGGGGATATTGGATCGGGCGAGGGGGATGCAGAATAGTAAGA
GGGATATGGGGGTGTTTGGGGAGTGGGTGATGTATTGGGTGATGTGGGTT
ATGGGGTTCTTTCCAGGGTTGCTTGGGAGGCAGCAGCAGGAGGTGTTTGA
TTATGATTTGCCGGGGGATGTGGAGCGGGTGTTGGATGGAAGGTAGATGA
AAATCATCATCATCGGCGCCGGTATCTCCGGCTGCGCCGCATATCTCACC
CTCCGGAAACATCTCCCACCACCACCCCCATCATCCTCACCCACCCAAGA
CCACGAATACACCATCTACGAAGCATACCCCACCACCATCGACACCACCT
CTGACGACCGCCCCAATGACGAACACAGCACCCACTCCGCAACCCTAACC
ATAGGCGGCGGGCTCGGCGTAGCCCCCAACGGCCTCCGCGTACTCGAACG
CCTCGACGAGGACATTCTCCGCGACGCAGTCAGCGGCGGATACATGGTCG
ACCACAGCAACCTGAAAGACAAACACGGCCGGGTGTTGATGCGACTCCCT
TCATCCAGCACCACCACCACCGGCAGCAGGGACAGCGATGGAACTACTAC
TACCCCAATGCACCTCCTCGGCACAAGCCGACATAACATCTGGCGATGTC
TGCGCAAACGCATCCCAGACAGCATCATCATCAATAAGCGAGTAGCGAGT
GTAACCGCGCACCCTACCCACCGCAACACAGTCACCTTCGTTGATGGAAG
CGAGCCCGTACACGCAGATCTTGTCATAGGTGCGGATGGTTTAAAGAGTG
TTACTAAACACGCCCTCTTCGATGGGGATCCGTACCCCCCTCATTACGAA
GGCCTAATCGGCATCGGCGGCTTCCTCCCCACCAGCACCCTCCCACCAAC
CATCCCCCGACCGGAACCAGGATCCATGAATTTCTGCTTCAGCGGAACAG
GGTTTTTCGGCTACTTCTACGCTACTAGCTCTCCTACCTCTGTTGATCGC
TGCTCCGCATATCATATCTCCCCGCCGGGGGATACATTAGCTTGGTGGAC
TACATACTCAACACCTACTTCTTCTTCTTCTTCCACCCCACCTAATACTC
AAGATCTAGATATGGATGATGTGACAGCCCAACTCCAGGACAGGTTCTCG
TCATGGACTGATCCTCTCGTCCGTCATATTATCCGTTCTGTGCAGGTGCA
GACGATGTGGCCGACCTGGACGAGTCCGCCGCTTCCTACCTGGGAGAGGG
AGGGGGTGGTGCTGGTGGGGGATGCGGCGCATGCGTTGCCGTCGACGTCG
GGACAGGGGGCGAGCCAGGCGTTGGAGGATGTGGAGGCTTTGGGAAGGTT
GGTGGCGCATGAGGTGGGGATTGGGTATCAGGAACAACTGGTGTTAGGGG
TGTCTGGTGGGGTGGAGGGAGAGAAACGGGCTATTCAGATGGCGTGTAAA
CGGTATGTGGAGATGAGGATGCCGAGGGTGAGGGGGATATTGGATCGGGC
GAGGGGGATGCAGAATAGTAAGAGGGATATGGGGGTGTTTGGGGAGTGGG
TGATGTATTGGGTGATGTGGGTTATGGGGTTCTTTCCAGGGTTGCTTGGG
AGGCAGCAGCAGGAGGTGTTTGATTATGATTTGCCGGGGGATGTGGAGCG
GGTGTTGGATGGAAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008179-T1.utr5p1 | KJC3_008179-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008179-T1.utr3p1 | KJC3_008179-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1190927..1192651 + |
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