KJC3_008182-T1, KJC3_008182-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_008182-T1
Unique Name	KJC3_008182-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch6:1197743..1199499-
coding sequence from alignment at ch6:1197743..1199499-

mRNA from alignment at ch6:1197743..1199499-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_008182-T1 ID=KJC3_008182-T1|Name=KJC3_008182-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1757bp|location=Sequence derived from alignment at ch6:1197743..1199499- (Aspergillus niger KJC3)
ACCAAATGTTGCCATGCCCACGCGCGCAGAGTTGGCAACCCAGGCTTGTG
ACATCTGCCGGAAGCGCAAGGTCAAATGCAATGTGACTTCGTCATCGACC
GATGTCCCTTCCAGATGTGGGCGCTGCGCTAGACTGGACCTGCCATGCAC
CTTTCTGTCTCCATCCCGGACGCGAGGCCCGAAGAAACGGTACGTTGCTC
GGTTCTGATTTGGCAGTGAGTGGTGTCAATTGCTAACGCACACTCCAAGC
TCACGTACAGGATCTCCGGCACAAGAACAGCCAGATTGGGGGACGGGGAG
CAGCCGGGCTTCGGGTGCCGTTAATTATCCCACGGATGATGTATGCGATC
GGCGCATGTTTTCCTGCATCATGCAGGACTATTTGGACTACCTGTACCCC
TTGATTCCAATCGTACATCGTCCGTCTTTCCAACAGTCCTTGCAGCAGGA
CCGGGATCGTGAGGACAGCGGATTCCTCGGGCTCGTCACCGCCATCGCTG
CGGTGGTTATCGCCACTATGCCTAGCAGATTTCATTTCTATCGATCTGCG
ACCCCGCCCTTGAGATTTACCTCGCGCAGGGACATGGTCCGTCACTGCTA
TGACAAAATCCTGCGGCTGAGGGACTCTACCTACTTTGACCACATCAACT
TCCAGAAGTTTGCCATCTCATACTTGCTGTATGCTGCCTTTCGGCAGTTG
GGTGATCATAACTGGTCCCGCATGCTAGATGTGGAGGCGACACAAATTGC
TCGCTTGCTAAATCTTCATCGAATCTCTGAATACGATGGACTTAACTGCA
TTGAGACTCAACTGCGGAAAAAGGGCTTCTGGTTGATCTTCTACGGATTT
GTGTAAGTGTGCATCACCCGGAGCGTAGCCGTCAGTCTCGCTCATTCAAT
CCAGTCATAATCAATTGCAGAATGTGCTAGGAGAGCGGTTGTCGTATCTT
GACCCCATCCTTCTCCATTCCATTAACCCGGAAGATCTCATGCCACTCGA
AGTCGATGACGAAATGATCTTCGAGAACGAGGTGCTCATGCCACCGTCCC
ATACTCCATGCCTGGTAACGGGGTTTATCCTCCATTCCAGGGTTTTCTGG
GCTGCGATTAGGAGCACCTGTCCAGAATCACCGGCTGAGCCGTGCCCCTG
TGTGAGGGCCCGCGATGCAGCCGTGCAGGTTGCTTACATCCAGGATCGTC
TTCATAGTCTACGGTTCTTACTGGAGGATATCCCTCCTCTCCTCCGGCCA
TGGCAGCCACCGGATAGCCAGGCTATCGCCCATGAAGGTGGCAGCACTGG
TGTGACGGAGATGACGCAGTCACACTTTGCTTCTATGCGAGCAAATTTAC
ACGTCACGCACCTGTGGCTACAAAGCTTGCTTGTTGATCAGTTGGAGGCG
GCGCAGGCGCACAAATCAGAGCCGTCACTAGTTTCTACCAACCACGTACA
ACCCATGGTTGACGCAAAAGCGTTGTGGCTCCAGAGGGAGGGCCTTTGTC
GTCAACTATTCTGCATCCTATACAGCCTGCCCCAGATCAATCTGGAAGCG
AACGGTCTACATTTGGCGTACAAAGTGCGTGATATTGCGGCGGGCCTGCT
GGTATGCCCATTTCATGCCGCCGGCCCGGAAGCGGAGCGAGCAACCGAGT
ATCTACGACAATCGACCGACATCTTGTCCCGCCTGGACAGCAGCGAAGGC
ATGGTCACGATGCATCTGCAGACTTGGATAGATACAGATCGAATAAAAAG
TAGTTAA

Coding sequence (CDS) from alignment at ch6:1197743..1199499-

>KJC3_008182-T1 ID=KJC3_008182-T1|Name=KJC3_008182-T1|organism=Aspergillus niger KJC3|type=CDS|length=4896bp|location=Sequence derived from alignment at ch6:1197743..1199499- (Aspergillus niger KJC3)
TCATAATCAATTGCAGAATGTGCTAGGAGAGCGGTTGTCGTATCTTGACC
CCATCCTTCTCCATTCCATTAACCCGGAAGATCTCATGCCACTCGAAGTC
GATGACGAAATGATCTTCGAGAACGAGGTGCTCATGCCACCGTCCCATAC
TCCATGCCTGGTAACGGGGTTTATCCTCCATTCCAGGGTTTTCTGGGCTG
CGATTAGGAGCACCTGTCCAGAATCACCGGCTGAGCCGTGCCCCTGTGTG
AGGGCCCGCGATGCAGCCGTGCAGGTTGCTTACATCCAGGATCGTCTTCA
TAGTCTACGGTTCTTACTGGAGGATATCCCTCCTCTCCTCCGGCCATGGC
AGCCACCGGATAGCCAGGCTATCGCCCATGAAGGTGGCAGCACTGGTGTG
ACGGAGATGACGCAGTCACACTTTGCTTCTATGCGAGCAAATTTACACGT
CACGCACCTGTGGCTACAAAGCTTGCTTGTTGATCAGTTGGAGGCGGCGC
AGGCGCACAAATCAGAGCCGTCACTAGTTTCTACCAACCACGTACAACCC
ATGGTTGACGCAAAAGCGTTGTGGCTCCAGAGGGAGGGCCTTTGTCGTCA
ACTATTCTGCATCCTATACAGCCTGCCCCAGATCAATCTGGAAGCGAACG
GTCTACATTTGGCGTACAAAGTGCGTGATATTGCGGCGGGCCTGCTGGTA
TGCCCATTTCATGCCGCCGGCCCGGAAGCGGAGCGAGCAACCGAGTATCT
ACGACAATCGACCGACATCTTGTCCCGCCTGGACAGCAGCGAAGGCATGG
TCACGATGCATCTGCAGACTTGGATAGATACAGATCGAATAAAAAGTAGT
TAACTCACGTACAGGATCTCCGGCACAAGAACAGCCAGATTGGGGGACGG
GGAGCAGCCGGGCTTCGGGTGCCGTTAATTATCCCACGGATGATGTATGC
GATCGGCGCATGTTTTCCTGCATCATGCAGGACTATTTGGACTACCTGTA
CCCCTTGATTCCAATCGTACATCGTCCGTCTTTCCAACAGTCCTTGCAGC
AGGACCGGGATCGTGAGGACAGCGGATTCCTCGGGCTCGTCACCGCCATC
GCTGCGGTGGTTATCGCCACTATGCCTAGCAGATTTCATTTCTATCGATC
TGCGACCCCGCCCTTGAGATTTACCTCGCGCAGGGACATGGTCCGTCACT
GCTATGACAAAATCCTGCGGCTGAGGGACTCTACCTACTTTGACCACATC
AACTTCCAGAAGTTTGCCATCTCATACTTGCTGTATGCTGCCTTTCGGCA
GTTGGGTGATCATAACTGGTCCCGCATGCTAGATGTGGAGGCGACACAAA
TTGCTCGCTTGCTAAATCTTCATCGAATCTCTGAATACGATGGACTTAAC
TGCATTGAGACTCAACTGCGGAAAAAGGGCTTCTGGTTGATCTTCTACGG
ATTTGTATGCCCACGCGCGCAGAGTTGGCAACCCAGGCTTGTGACATCTG
CCGGAAGCGCAAGGTCAAATGCAATGTGACTTCGTCATCGACCGATGTCC
CTTCCAGATGTGGGCGCTGCGCTAGACTGGACCTGCCATGCACCTTTCTG
TCTCCATCCCGGACGCGAGGCCCGAAGAAACGTCATAATCAATTGCAGAA
TGTGCTAGGAGAGCGGTTGTCGTATCTTGACCCCATCCTTCTCCATTCCA
TTAACCCGGAAGATCTCATGCCACTCGAAGTCGATGACGAAATGATCTTC
GAGAACGAGGTGCTCATGCCACCGTCCCATACTCCATGCCTGGTAACGGG
GTTTATCCTCCATTCCAGGGTTTTCTGGGCTGCGATTAGGAGCACCTGTC
CAGAATCACCGGCTGAGCCGTGCCCCTGTGTGAGGGCCCGCGATGCAGCC
GTGCAGGTTGCTTACATCCAGGATCGTCTTCATAGTCTACGGTTCTTACT
GGAGGATATCCCTCCTCTCCTCCGGCCATGGCAGCCACCGGATAGCCAGG
CTATCGCCCATGAAGGTGGCAGCACTGGTGTGACGGAGATGACGCAGTCA
CACTTTGCTTCTATGCGAGCAAATTTACACGTCACGCACCTGTGGCTACA
AAGCTTGCTTGTTGATCAGTTGGAGGCGGCGCAGGCGCACAAATCAGAGC
CGTCACTAGTTTCTACCAACCACGTACAACCCATGGTTGACGCAAAAGCG
TTGTGGCTCCAGAGGGAGGGCCTTTGTCGTCAACTATTCTGCATCCTATA
CAGCCTGCCCCAGATCAATCTGGAAGCGAACGGTCTACATTTGGCGTACA
AAGTGCGTGATATTGCGGCGGGCCTGCTGGTATGCCCATTTCATGCCGCC
GGCCCGGAAGCGGAGCGAGCAACCGAGTATCTACGACAATCGACCGACAT
CTTGTCCCGCCTGGACAGCAGCGAAGGCATGGTCACGATGCATCTGCAGA
CTTGGATAGATACAGATCGAATAAAAAGTAGTTAACTCACGTACAGGATC
TCCGGCACAAGAACAGCCAGATTGGGGGACGGGGAGCAGCCGGGCTTCGG
GTGCCGTTAATTATCCCACGGATGATGTATGCGATCGGCGCATGTTTTCC
TGCATCATGCAGGACTATTTGGACTACCTGTACCCCTTGATTCCAATCGT
ACATCGTCCGTCTTTCCAACAGTCCTTGCAGCAGGACCGGGATCGTGAGG
ACAGCGGATTCCTCGGGCTCGTCACCGCCATCGCTGCGGTGGTTATCGCC
ACTATGCCTAGCAGATTTCATTTCTATCGATCTGCGACCCCGCCCTTGAG
ATTTACCTCGCGCAGGGACATGGTCCGTCACTGCTATGACAAAATCCTGC
GGCTGAGGGACTCTACCTACTTTGACCACATCAACTTCCAGAAGTTTGCC
ATCTCATACTTGCTGTATGCTGCCTTTCGGCAGTTGGGTGATCATAACTG
GTCCCGCATGCTAGATGTGGAGGCGACACAAATTGCTCGCTTGCTAAATC
TTCATCGAATCTCTGAATACGATGGACTTAACTGCATTGAGACTCAACTG
CGGAAAAAGGGCTTCTGGTTGATCTTCTACGGATTTGTATGCCCACGCGC
GCAGAGTTGGCAACCCAGGCTTGTGACATCTGCCGGAAGCGCAAGGTCAA
ATGCAATGTGACTTCGTCATCGACCGATGTCCCTTCCAGATGTGGGCGCT
GCGCTAGACTGGACCTGCCATGCACCTTTCTGTCTCCATCCCGGACGCGA
GGCCCGAAGAAACGTCATAATCAATTGCAGAATGTGCTAGGAGAGCGGTT
GTCGTATCTTGACCCCATCCTTCTCCATTCCATTAACCCGGAAGATCTCA
TGCCACTCGAAGTCGATGACGAAATGATCTTCGAGAACGAGGTGCTCATG
CCACCGTCCCATACTCCATGCCTGGTAACGGGGTTTATCCTCCATTCCAG
GGTTTTCTGGGCTGCGATTAGGAGCACCTGTCCAGAATCACCGGCTGAGC
CGTGCCCCTGTGTGAGGGCCCGCGATGCAGCCGTGCAGGTTGCTTACATC
CAGGATCGTCTTCATAGTCTACGGTTCTTACTGGAGGATATCCCTCCTCT
CCTCCGGCCATGGCAGCCACCGGATAGCCAGGCTATCGCCCATGAAGGTG
GCAGCACTGGTGTGACGGAGATGACGCAGTCACACTTTGCTTCTATGCGA
GCAAATTTACACGTCACGCACCTGTGGCTACAAAGCTTGCTTGTTGATCA
GTTGGAGGCGGCGCAGGCGCACAAATCAGAGCCGTCACTAGTTTCTACCA
ACCACGTACAACCCATGGTTGACGCAAAAGCGTTGTGGCTCCAGAGGGAG
GGCCTTTGTCGTCAACTATTCTGCATCCTATACAGCCTGCCCCAGATCAA
TCTGGAAGCGAACGGTCTACATTTGGCGTACAAAGTGCGTGATATTGCGG
CGGGCCTGCTGGTATGCCCATTTCATGCCGCCGGCCCGGAAGCGGAGCGA
GCAACCGAGTATCTACGACAATCGACCGACATCTTGTCCCGCCTGGACAG
CAGCGAAGGCATGGTCACGATGCATCTGCAGACTTGGATAGATACAGATC
GAATAAAAAGTAGTTAACTCACGTACAGGATCTCCGGCACAAGAACAGCC
AGATTGGGGGACGGGGAGCAGCCGGGCTTCGGGTGCCGTTAATTATCCCA
CGGATGATGTATGCGATCGGCGCATGTTTTCCTGCATCATGCAGGACTAT
TTGGACTACCTGTACCCCTTGATTCCAATCGTACATCGTCCGTCTTTCCA
ACAGTCCTTGCAGCAGGACCGGGATCGTGAGGACAGCGGATTCCTCGGGC
TCGTCACCGCCATCGCTGCGGTGGTTATCGCCACTATGCCTAGCAGATTT
CATTTCTATCGATCTGCGACCCCGCCCTTGAGATTTACCTCGCGCAGGGA
CATGGTCCGTCACTGCTATGACAAAATCCTGCGGCTGAGGGACTCTACCT
ACTTTGACCACATCAACTTCCAGAAGTTTGCCATCTCATACTTGCTGTAT
GCTGCCTTTCGGCAGTTGGGTGATCATAACTGGTCCCGCATGCTAGATGT
GGAGGCGACACAAATTGCTCGCTTGCTAAATCTTCATCGAATCTCTGAAT
ACGATGGACTTAACTGCATTGAGACTCAACTGCGGAAAAAGGGCTTCTGG
TTGATCTTCTACGGATTTGTATGCCCACGCGCGCAGAGTTGGCAACCCAG
GCTTGTGACATCTGCCGGAAGCGCAAGGTCAAATGCAATGTGACTTCGTC
ATCGACCGATGTCCCTTCCAGATGTGGGCGCTGCGCTAGACTGGACCTGC
CATGCACCTTTCTGTCTCCATCCCGGACGCGAGGCCCGAAGAAACG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0042025	host cell nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_008182	KJC3_008182	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_008182-T1	KJC3_008182-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_008182-T1.cds	KJC3_008182-T1.cds	Aspergillus niger KJC3	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_008182-T1.exon3	KJC3_008182-T1.exon3	Aspergillus niger KJC3	exon
KJC3_008182-T1.exon2	KJC3_008182-T1.exon2	Aspergillus niger KJC3	exon
KJC3_008182-T1.exon1	KJC3_008182-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_008182-T1.utr5p1	KJC3_008182-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
Note	antiSMASH:Cluster_6.9
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR007219
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF04082
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch6	supercontig	ch6:1197743..1199499 -

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KJC3_008182-T1, KJC3_008182-T1 (mRNA) Aspergillus niger KJC3