You are here

Home

KJC3_008185-T1, KJC3_008185-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008185-T1
Unique NameKJC3_008185-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1208101..1209665-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008185-T1 ID=KJC3_008185-T1|Name=KJC3_008185-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1565bp|location=Sequence derived from alignment at ch6:1208101..1209665- (Aspergillus niger KJC3)
CTCAGCCAGACTCATCGTTCCATCTGTCCAGAATCTCTCGCAGCCTTCTT
CCTTCACCCTCTTCATAAGATATACAAAATGAGCAACATCCTGGATAGCT
TCCCCGAGTACGCCCAGACAACATCTCTGGATCATCTTCGGGAGACCCAG
TATAGCTACTTGGACGAACGGGGTCACACATACCTCGACTACACTGGCTC
TGGCCTCGCCGCCAAGGAACAGTATCATGCCCACAACGCACGCCTCACGG
AGCAGGCATTTGGCAACCCGCACTCCGTCAGTCCCACTAGTGAGAACTCC
ACCCGACTTGTCGAGCAGGCGCGCGCCCATGTACTCTCCTATTTTAATGC
CTCGCCCGACACGTATACCGTCATCTTCACTCAGAACGCTACAGGAGCAG
CACGTCTCGTTGGCGAATCCTACCCCTTCTCCCGGCAGAAACAGTTCATC
TTGACGGCAGACAACCACAACTCTGTAAATGGAATCCGCGAGTACGCCCG
AGCAAAGCATTCACGCACCGTCTACGTGCCTGTGCAGTCTCCAGACCTCC
GAGTCAGCCCAGCCACTTTGGCATCGGTCCTCGGAACCCACTGGTGGGAG
TGGGGACGGGACCGACTAGCAATGACCAAGGGAGGCCGTCCAAACCGTGA
TCGGGGACTATTTGCCTATCCAGCCCAGAGCAATTTCAGTGGAGTCCGCC
ATCCCCTCGAATGGGTGACATTGGCCCAAGAATGTGGCTTCGATGTGCTC
CTAGACGCCGCCGCGTATCTTCCCACCAATAAGTTGGATCTGTCCGACAA
GAACCCCCAGCCCGACTTCATCATGGTCAGCTGGTACAAGCTCTTTGGAT
ACCCCACCGGCCTAGGCTGTCTGATTGCCCGCCGTGATGCTCTGAATCGC
CTCTCGCGGCCCTGGTTCTCCGGTGGGACAGTCAAATCGGTGGGGGTAGC
GCTGACCTGGCATATCCTGGCCAGCGACGAGGCCGGGTTCGAGGATGGCA
CCCTGAATTTCTTGTCCATTCCGGATATTCAAGTGGGTCTGGAATGGCTG
GAGCGCGTGAACATGTCCTTGATCTCCACCCGAGTGCGCTGCCTTACAGG
CTGGTTCCTCCAGCGGCTGCTCGAACTCAGACACAGTGACGGTTCTCCGA
TGGCCGAAATTTACGGGCCCACCGACCTCAAGCGCCGAGGCGGCACCATC
TGCTTCAACTTTCTGGACGCCAAGGGAGATATCGTGGATGAGCGACTCGT
GGCGCAGGAATCGGCAACCGCCTCGATCTCCTTGCGCACTGGCTGCTTCT
GTAATCCGGGGCCCGCAGAGAAGGCTTTACGGCTGGATACGCGGCCGCTA
CGGCGGATGCGACGTCGTCTCCGCAAGGGCCTGATCCCGCTGGAGACCTA
CATGAGCATCGGACGGCTTCCGTCGGGAGGGGCCATCCGCGTATCATTTG
GCGTGGCGTCGAATACAGCAGATGTAGATCGATTTTTCGACTTTGCTACC
CAAACCTACCGGGACCGGGTGCCTGATACCAGTGGATTCAGCCCGCGTGA
GGGGTGCTGAAGGGG
back to top

Coding sequence (CDS) from alignment at ch6:1208101..1209665-

>KJC3_008185-T1 ID=KJC3_008185-T1|Name=KJC3_008185-T1|organism=Aspergillus niger KJC3|type=CDS|length=1482bp|location=Sequence derived from alignment at ch6:1208101..1209665- (Aspergillus niger KJC3)
ATGAGCAACATCCTGGATAGCTTCCCCGAGTACGCCCAGACAACATCTCT
GGATCATCTTCGGGAGACCCAGTATAGCTACTTGGACGAACGGGGTCACA
CATACCTCGACTACACTGGCTCTGGCCTCGCCGCCAAGGAACAGTATCAT
GCCCACAACGCACGCCTCACGGAGCAGGCATTTGGCAACCCGCACTCCGT
CAGTCCCACTAGTGAGAACTCCACCCGACTTGTCGAGCAGGCGCGCGCCC
ATGTACTCTCCTATTTTAATGCCTCGCCCGACACGTATACCGTCATCTTC
ACTCAGAACGCTACAGGAGCAGCACGTCTCGTTGGCGAATCCTACCCCTT
CTCCCGGCAGAAACAGTTCATCTTGACGGCAGACAACCACAACTCTGTAA
ATGGAATCCGCGAGTACGCCCGAGCAAAGCATTCACGCACCGTCTACGTG
CCTGTGCAGTCTCCAGACCTCCGAGTCAGCCCAGCCACTTTGGCATCGGT
CCTCGGAACCCACTGGTGGGAGTGGGGACGGGACCGACTAGCAATGACCA
AGGGAGGCCGTCCAAACCGTGATCGGGGACTATTTGCCTATCCAGCCCAG
AGCAATTTCAGTGGAGTCCGCCATCCCCTCGAATGGGTGACATTGGCCCA
AGAATGTGGCTTCGATGTGCTCCTAGACGCCGCCGCGTATCTTCCCACCA
ATAAGTTGGATCTGTCCGACAAGAACCCCCAGCCCGACTTCATCATGGTC
AGCTGGTACAAGCTCTTTGGATACCCCACCGGCCTAGGCTGTCTGATTGC
CCGCCGTGATGCTCTGAATCGCCTCTCGCGGCCCTGGTTCTCCGGTGGGA
CAGTCAAATCGGTGGGGGTAGCGCTGACCTGGCATATCCTGGCCAGCGAC
GAGGCCGGGTTCGAGGATGGCACCCTGAATTTCTTGTCCATTCCGGATAT
TCAAGTGGGTCTGGAATGGCTGGAGCGCGTGAACATGTCCTTGATCTCCA
CCCGAGTGCGCTGCCTTACAGGCTGGTTCCTCCAGCGGCTGCTCGAACTC
AGACACAGTGACGGTTCTCCGATGGCCGAAATTTACGGGCCCACCGACCT
CAAGCGCCGAGGCGGCACCATCTGCTTCAACTTTCTGGACGCCAAGGGAG
ATATCGTGGATGAGCGACTCGTGGCGCAGGAATCGGCAACCGCCTCGATC
TCCTTGCGCACTGGCTGCTTCTGTAATCCGGGGCCCGCAGAGAAGGCTTT
ACGGCTGGATACGCGGCCGCTACGGCGGATGCGACGTCGTCTCCGCAAGG
GCCTGATCCCGCTGGAGACCTACATGAGCATCGGACGGCTTCCGTCGGGA
GGGGCCATCCGCGTATCATTTGGCGTGGCGTCGAATACAGCAGATGTAGA
TCGATTTTTCGACTTTGCTACCCAAACCTACCGGGACCGGGTGCCTGATA
CCAGTGGATTCAGCCCGCGTGAGGGGTGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008185KJC3_008185Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008185-T1.cdsKJC3_008185-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008185-T1.utr3p1KJC3_008185-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008185-T1.exon1KJC3_008185-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008185-T1.utr5p1KJC3_008185-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008185-T1KJC3_008185-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_6.9
NoteSMCOG1139:aminotransferase class V
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR000192
DBxrefInterPro:IPR015421
DBxrefPFAM:PF00266
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1208101..1209665 -
Powered by Drupal