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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1226479..1227944- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008190-T1 ID=KJC3_008190-T1|Name=KJC3_008190-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1466bp|location=Sequence derived from alignment at ch6:1226479..1227944- (Aspergillus niger KJC3)
ATGACCGTCCCCAACTCAAAGGACGCACACGTCCTTATTATCGGCGCAGG
TATCACAGGCCTTATCCTCGCACAGTCTCTCAAGAAGGTAGACTTGACCC
CCACGTCGCCATGATCCTCTCAAACTCCCCTCTCTGGGTAACAGTAATCA
TCTAACCTGCCGCAGGCCGGCATCCGCTACTCCATCTTCGAAAAGGAGGT
GTCTATGAACTACCGCAGCAATGAATGGACTATGGCTATCCACTGGTCCC
TCGACCGTCTGCGCGACATCCTCCCCGCCGACCGTTTCGCACACATGGAG
TCCGTCTCGTGCAACCCTGATGTTGCCCTGGACGCTGGCGGAAACTATCC
CATCATTCATGGGGAAACAGGCCACCTGATTGCCGGTGTACCGTATGCCA
AAGGACTGCGGGTTCCGCGCAGTAAGATGCGGGATCTGTGTAGCAAGGGG
ATTGAAGTCCAGTACGGAAAGAACCTGATCGATGTGGCGTTCACTGAAAG
CCAAAAAGGAGTAGTTGCATTCTTTGATGATGGTTCCATGGTCTCTGGAA
CTATCCTTATCGGTGCGGATGGGCCTCGTTCGAAGGTCCGTGAGTTCGCA
ATGGGCTCGGCTGAGAAGGCGGCTGTTAGCCGCTTTCCCATCTTTCATAC
TAATATGACCGTTACCTACAACGATGCTGAGAAAGCTAGGTATGTAAGGC
AGCGATTTCCGACGAGTTATCTGGCTTTGAGTGACAAGTCGTATCATGCG
TTCCAATCCAGTAGGTATCCAGATTTTATTTGCGTCATTCTAGATTAGAT
ACTGATTTCGTAAGTCTCGAGCATGCCTGATGGCCCCGATCATCCCGAAT
CATGGGTCTTTCACTTGGCTATGGCCTGGTTCATGGAACACGGTCAACCT
GCTACTTACCGCGAGAGATTAGACATGATTCGCGAGAAAGCCCAAAGTCT
GGCTGAGCCGGCTCGGTCCTCGTTCACTTGGATCCCAGATGATACGCAGG
TCCATAAAGCTGATATCAGCTACTGGGTTACCCAGCCTTGGGATAATCGG
CAGGGCAGATTGACATTGATTGGGGACGCAGCGCATCCGATGCCGCCGTG
TAAGTTAGCTATACATTCACTACCAATATCGGTGTACTGATTATGGTATA
ATATGGGTGGTTAGACAGAGGGCAGGGACTCAATCACTGCATATGTGATA
CGTCTCACCTTTTGGCTGGCATTCAGAAGGTTGTAGCCGGTACGGCTACT
CTGAAAGAGGCTATTACTGCGTACGAAGCGGAGATGATTCCCCGCGGTCG
CGAAGAGGTCAAGTGCTCGGTCGAGAACGGGTACATGCTGCATGATTGGG
ATCAAGTCCGTGAGAGTCCTGTTTTCCGACAAGGGTTCCGGCCTATGAGT
GGACACGATAGAGGGTCTGTGGATGGGCACGAGAAGATGCAACCAAAGGA
TATTGCAGCAAACTGA back to topCoding sequence (CDS) from alignment at ch6:1226479..1227944- >KJC3_008190-T1 ID=KJC3_008190-T1|Name=KJC3_008190-T1|organism=Aspergillus niger KJC3|type=CDS|length=5076bp|location=Sequence derived from alignment at ch6:1226479..1227944- (Aspergillus niger KJC3)
ACAGAGGGCAGGGACTCAATCACTGCATATGTGATACGTCTCACCTTTTG
GCTGGCATTCAGAAGGTTGTAGCCGGTACGGCTACTCTGAAAGAGGCTAT
TACTGCGTACGAAGCGGAGATGATTCCCCGCGGTCGCGAAGAGGTCAAGT
GCTCGGTCGAGAACGGGTACATGCTGCATGATTGGGATCAAGTCCGTGAG
AGTCCTGTTTTCCGACAAGGGTTCCGGCCTATGAGTGGACACGATAGAGG
GTCTGTGGATGGGCACGAGAAGATGCAACCAAAGGATATTGCAGCAAACT
GATCTCGAGCATGCCTGATGGCCCCGATCATCCCGAATCATGGGTCTTTC
ACTTGGCTATGGCCTGGTTCATGGAACACGGTCAACCTGCTACTTACCGC
GAGAGATTAGACATGATTCGCGAGAAAGCCCAAAGTCTGGCTGAGCCGGC
TCGGTCCTCGTTCACTTGGATCCCAGATGATACGCAGGTCCATAAAGCTG
ATATCAGCTACTGGGTTACCCAGCCTTGGGATAATCGGCAGGGCAGATTG
ACATTGATTGGGGACGCAGCGCATCCGATGCCGCCGTGCCGGCATCCGCT
ACTCCATCTTCGAAAAGGAGGTGTCTATGAACTACCGCAGCAATGAATGG
ACTATGGCTATCCACTGGTCCCTCGACCGTCTGCGCGACATCCTCCCCGC
CGACCGTTTCGCACACATGGAGTCCGTCTCGTGCAACCCTGATGTTGCCC
TGGACGCTGGCGGAAACTATCCCATCATTCATGGGGAAACAGGCCACCTG
ATTGCCGGTGTACCGTATGCCAAAGGACTGCGGGTTCCGCGCAGTAAGAT
GCGGGATCTGTGTAGCAAGGGGATTGAAGTCCAGTACGGAAAGAACCTGA
TCGATGTGGCGTTCACTGAAAGCCAAAAAGGAGTAGTTGCATTCTTTGAT
GATGGTTCCATGGTCTCTGGAACTATCCTTATCGGTGCGGATGGGCCTCG
TTCGAAGGTCCGTGAGTTCGCAATGGGCTCGGCTGAGAAGGCGGCTGTTA
GCCGCTTTCCCATCTTTCATACTAATATGACCGTTACCTACAACGATGCT
GAGAAAGCTAGGTATGTAAGGCAGCGATTTCCGACGAGTTATCTGGCTTT
GAGTGACAAGTCGTATCATGCGTTCCAATCCAATGACCGTCCCCAACTCA
AAGGACGCACACGTCCTTATTATCGGCGCAGGTATCACAGGCCTTATCCT
CGCACAGTCTCTCAAGAAGACAGAGGGCAGGGACTCAATCACTGCATATG
TGATACGTCTCACCTTTTGGCTGGCATTCAGAAGGTTGTAGCCGGTACGG
CTACTCTGAAAGAGGCTATTACTGCGTACGAAGCGGAGATGATTCCCCGC
GGTCGCGAAGAGGTCAAGTGCTCGGTCGAGAACGGGTACATGCTGCATGA
TTGGGATCAAGTCCGTGAGAGTCCTGTTTTCCGACAAGGGTTCCGGCCTA
TGAGTGGACACGATAGAGGGTCTGTGGATGGGCACGAGAAGATGCAACCA
AAGGATATTGCAGCAAACTGATCTCGAGCATGCCTGATGGCCCCGATCAT
CCCGAATCATGGGTCTTTCACTTGGCTATGGCCTGGTTCATGGAACACGG
TCAACCTGCTACTTACCGCGAGAGATTAGACATGATTCGCGAGAAAGCCC
AAAGTCTGGCTGAGCCGGCTCGGTCCTCGTTCACTTGGATCCCAGATGAT
ACGCAGGTCCATAAAGCTGATATCAGCTACTGGGTTACCCAGCCTTGGGA
TAATCGGCAGGGCAGATTGACATTGATTGGGGACGCAGCGCATCCGATGC
CGCCGTGCCGGCATCCGCTACTCCATCTTCGAAAAGGAGGTGTCTATGAA
CTACCGCAGCAATGAATGGACTATGGCTATCCACTGGTCCCTCGACCGTC
TGCGCGACATCCTCCCCGCCGACCGTTTCGCACACATGGAGTCCGTCTCG
TGCAACCCTGATGTTGCCCTGGACGCTGGCGGAAACTATCCCATCATTCA
TGGGGAAACAGGCCACCTGATTGCCGGTGTACCGTATGCCAAAGGACTGC
GGGTTCCGCGCAGTAAGATGCGGGATCTGTGTAGCAAGGGGATTGAAGTC
CAGTACGGAAAGAACCTGATCGATGTGGCGTTCACTGAAAGCCAAAAAGG
AGTAGTTGCATTCTTTGATGATGGTTCCATGGTCTCTGGAACTATCCTTA
TCGGTGCGGATGGGCCTCGTTCGAAGGTCCGTGAGTTCGCAATGGGCTCG
GCTGAGAAGGCGGCTGTTAGCCGCTTTCCCATCTTTCATACTAATATGAC
CGTTACCTACAACGATGCTGAGAAAGCTAGGTATGTAAGGCAGCGATTTC
CGACGAGTTATCTGGCTTTGAGTGACAAGTCGTATCATGCGTTCCAATCC
AATGACCGTCCCCAACTCAAAGGACGCACACGTCCTTATTATCGGCGCAG
GTATCACAGGCCTTATCCTCGCACAGTCTCTCAAGAAGACAGAGGGCAGG
GACTCAATCACTGCATATGTGATACGTCTCACCTTTTGGCTGGCATTCAG
AAGGTTGTAGCCGGTACGGCTACTCTGAAAGAGGCTATTACTGCGTACGA
AGCGGAGATGATTCCCCGCGGTCGCGAAGAGGTCAAGTGCTCGGTCGAGA
ACGGGTACATGCTGCATGATTGGGATCAAGTCCGTGAGAGTCCTGTTTTC
CGACAAGGGTTCCGGCCTATGAGTGGACACGATAGAGGGTCTGTGGATGG
GCACGAGAAGATGCAACCAAAGGATATTGCAGCAAACTGATCTCGAGCAT
GCCTGATGGCCCCGATCATCCCGAATCATGGGTCTTTCACTTGGCTATGG
CCTGGTTCATGGAACACGGTCAACCTGCTACTTACCGCGAGAGATTAGAC
ATGATTCGCGAGAAAGCCCAAAGTCTGGCTGAGCCGGCTCGGTCCTCGTT
CACTTGGATCCCAGATGATACGCAGGTCCATAAAGCTGATATCAGCTACT
GGGTTACCCAGCCTTGGGATAATCGGCAGGGCAGATTGACATTGATTGGG
GACGCAGCGCATCCGATGCCGCCGTGCCGGCATCCGCTACTCCATCTTCG
AAAAGGAGGTGTCTATGAACTACCGCAGCAATGAATGGACTATGGCTATC
CACTGGTCCCTCGACCGTCTGCGCGACATCCTCCCCGCCGACCGTTTCGC
ACACATGGAGTCCGTCTCGTGCAACCCTGATGTTGCCCTGGACGCTGGCG
GAAACTATCCCATCATTCATGGGGAAACAGGCCACCTGATTGCCGGTGTA
CCGTATGCCAAAGGACTGCGGGTTCCGCGCAGTAAGATGCGGGATCTGTG
TAGCAAGGGGATTGAAGTCCAGTACGGAAAGAACCTGATCGATGTGGCGT
TCACTGAAAGCCAAAAAGGAGTAGTTGCATTCTTTGATGATGGTTCCATG
GTCTCTGGAACTATCCTTATCGGTGCGGATGGGCCTCGTTCGAAGGTCCG
TGAGTTCGCAATGGGCTCGGCTGAGAAGGCGGCTGTTAGCCGCTTTCCCA
TCTTTCATACTAATATGACCGTTACCTACAACGATGCTGAGAAAGCTAGG
TATGTAAGGCAGCGATTTCCGACGAGTTATCTGGCTTTGAGTGACAAGTC
GTATCATGCGTTCCAATCCAATGACCGTCCCCAACTCAAAGGACGCACAC
GTCCTTATTATCGGCGCAGGTATCACAGGCCTTATCCTCGCACAGTCTCT
CAAGAAGACAGAGGGCAGGGACTCAATCACTGCATATGTGATACGTCTCA
CCTTTTGGCTGGCATTCAGAAGGTTGTAGCCGGTACGGCTACTCTGAAAG
AGGCTATTACTGCGTACGAAGCGGAGATGATTCCCCGCGGTCGCGAAGAG
GTCAAGTGCTCGGTCGAGAACGGGTACATGCTGCATGATTGGGATCAAGT
CCGTGAGAGTCCTGTTTTCCGACAAGGGTTCCGGCCTATGAGTGGACACG
ATAGAGGGTCTGTGGATGGGCACGAGAAGATGCAACCAAAGGATATTGCA
GCAAACTGATCTCGAGCATGCCTGATGGCCCCGATCATCCCGAATCATGG
GTCTTTCACTTGGCTATGGCCTGGTTCATGGAACACGGTCAACCTGCTAC
TTACCGCGAGAGATTAGACATGATTCGCGAGAAAGCCCAAAGTCTGGCTG
AGCCGGCTCGGTCCTCGTTCACTTGGATCCCAGATGATACGCAGGTCCAT
AAAGCTGATATCAGCTACTGGGTTACCCAGCCTTGGGATAATCGGCAGGG
CAGATTGACATTGATTGGGGACGCAGCGCATCCGATGCCGCCGTGCCGGC
ATCCGCTACTCCATCTTCGAAAAGGAGGTGTCTATGAACTACCGCAGCAA
TGAATGGACTATGGCTATCCACTGGTCCCTCGACCGTCTGCGCGACATCC
TCCCCGCCGACCGTTTCGCACACATGGAGTCCGTCTCGTGCAACCCTGAT
GTTGCCCTGGACGCTGGCGGAAACTATCCCATCATTCATGGGGAAACAGG
CCACCTGATTGCCGGTGTACCGTATGCCAAAGGACTGCGGGTTCCGCGCA
GTAAGATGCGGGATCTGTGTAGCAAGGGGATTGAAGTCCAGTACGGAAAG
AACCTGATCGATGTGGCGTTCACTGAAAGCCAAAAAGGAGTAGTTGCATT
CTTTGATGATGGTTCCATGGTCTCTGGAACTATCCTTATCGGTGCGGATG
GGCCTCGTTCGAAGGTCCGTGAGTTCGCAATGGGCTCGGCTGAGAAGGCG
GCTGTTAGCCGCTTTCCCATCTTTCATACTAATATGACCGTTACCTACAA
CGATGCTGAGAAAGCTAGGTATGTAAGGCAGCGATTTCCGACGAGTTATC
TGGCTTTGAGTGACAAGTCGTATCATGCGTTCCAATCCAATGACCGTCCC
CAACTCAAAGGACGCACACGTCCTTATTATCGGCGCAGGTATCACAGGCC
TTATCCTCGCACAGTCTCTCAAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.9 |
| Note | SMCOG1087:hypothetical protein |
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1226479..1227944 - |
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