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KJC3_008202-T1, KJC3_008202-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008202-T1
Unique NameKJC3_008202-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1251997..1253994-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008202-T1 ID=KJC3_008202-T1|Name=KJC3_008202-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1998bp|location=Sequence derived from alignment at ch6:1251997..1253994- (Aspergillus niger KJC3)
GCCGGTTACATCTGTCTCAGTATTCCAGCTACCATTGCCCTGGGTCCCTC
AAAACTCATCCAGGCTGAAGCCGACGGGATACTTCCATTAGGCACCCCAG
AAACGGTGGTTAATTCCAATCCACTTACTTCATGCGACGACGAAGCTATC
CCACCCGCTGTCCCCCCATCGTTTTTGGCAGCCCTCAAACTCCCTACTCC
AGACCTAACAGAGCAAATTCCCTTTCCCATCCTGCCTATATCACGGCAAC
TCCCAAGACAATGTCCCCATAGCCAATCAACCCCAGTCTCTATTCATCAC
CTCGCATACCCCTGTCCTCAACAATAACCTTGCTCAATATACCCCTGTCG
TTATATAAACCACCATGAAGATATTCCTCCCGGTTACACGACCATCCAAC
GTTGCCATCGCCAGCCAAAAAGCAGCCATCACCACCACCACTGCCGCCAA
CCATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCCAACACCAAC
CCGGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAG
ACTCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGACGAAGAACA
TCATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGGGCAGACGCC
ATCTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGACCCCACAGG
TAGATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCGACGACCTCT
CCCACGCCATCCAACTCGGCGATATCTCCGACGTCGACTACTACCTGTCC
CGCAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTCCCTGCTCCA
CCTAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCCTCCTCGACA
GAGGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCTGAGCTCGAC
CAACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCG
CGTCAACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTATCCGCCGCT
TCCCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCCAACGAACTC
CTCGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGAACGCTCCAA
GTCAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCACGCCCGAGG
CATGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACCACATATACA
GATTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAAAAATGAGCT
GACAGCCTGCTTCCTCATCTCGGCAGATATGACCCTGCAGATGCGCCACG
GGTACGACCGCACCGAGCTGTTCCTGGCGGCATGTATGGGCCTGCGCCGC
GTCGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTACCCGCCGCA
GAAGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGCTGTATATGG
GGAATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGATTGTATGTG
TTACCTTTTCACCCCCTTCATGGAAACTTATAAGTAATATTGACTGATAT
ATGTTGTGTGTAGATCATGGCACTCCTGTCTATCTCAGTTTCTTACCCGA
CCCCGGCCTGTCCTGACCTCTACTAGCATTCGGGGGATTGAGACTAGGAG
ATCGAGGAGTAGACGGGCTAGGAGTGTGAGGGGTGATACTACTAATCAAC
AGTGTTCTGTTGAGGCTGGGAGTTCGGCTGCGTCGCTGAGTGGGAATGTG
AATGTGCCTGCTCCTTCTCATCCGCTCGCTACTGTAACCAATCCGGGGAC
TGATAATCTTATGGACAGCGACGAGGGTGCGGTGGATGCTATGAGTCTGG
ATGCCCAGGTTGATCGGTTTCTGCAAAGTGTTGGTAGTAATGAATGTGGT
AATCTTGGGGTCATGGATACGGTGATGGAGAGCATTGAGGAGTCGTGA
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Coding sequence (CDS) from alignment at ch6:1251997..1253994-

>KJC3_008202-T1 ID=KJC3_008202-T1|Name=KJC3_008202-T1|organism=Aspergillus niger KJC3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch6:1251997..1253994- (Aspergillus niger KJC3)
ATCATGGCACTCCTGTCTATCTCAGTTTCTTACCCGACCCCGGCCTGTCC
TGACCTCTACTAGCATTCGGGGGATTGAGACTAGGAGATCGAGGAGTAGA
CGGGCTAGGAGTGTGAGGGGTGATACTACTAATCAACAGTGTTCTGTTGA
GGCTGGGAGTTCGGCTGCGTCGCTGAGTGGGAATGTGAATGTGCCTGCTC
CTTCTCATCCGCTCGCTACTGTAACCAATCCGGGGACTGATAATCTTATG
GACAGCGACGAGGGTGCGGTGGATGCTATGAGTCTGGATGCCCAGGTTGA
TCGGTTTCTGCAAAGTGTTGGTAGTAATGAATGTGGTAATCTTGGGGTCA
TGGATACGGTGATGGAGAGCATTGAGGAGTCGTGAATGCCTTGCACGCCC
AGCCCCTTCAAAGCCCCAGTGCCCAACACCAACCCGGCTCTGGAAGCCGT
GGCAGAGAAGCTTCGCGCCAGCGGCAGCAGAAGACTCCTCACCCCAGAAG
GCATCGGGGCGCTCTCCACCTCGACGAAGAACATCATCGACAATCTATAT
ATCAATGTCCGAAAGAACTGCTGGGCAGACGCCATCTGCGAAACCCCAGC
AGGCCTCCGCTCTGGTCGAATGGACCCCACAGGTAGATGGCACCTTCGTA
ACCCTCACGTCGCCGCCTTCATCGACGACCTCTCCCACGCCATCCAACTC
GGCGATATCTCCGACGTCGACTACTACCTGTCCCGCAGAATCGCCCTCAA
CACCTGCGACCGCGAGGGCAACTCCCTGCTCCACCTAGCACTAGTCTCCG
GCCACTTGGACATCGCCCGTCTCCTCCTCGACAGAGGCGCCAGCCCCCTA
TACAGCTTTGACCCGGAAGTCCCTGAGCTCGACCAACTCTTCCAATGCCC
CAGCCGCGTTGCGCCCCAGCTCAGTTCCATCCGCGTCAACATCCTCCGTC
TGCTGCTCAGATACGGCGCCCCTATCCGCCGCTTCCCCACCCTCAACGTC
CTCTTCGACTCCCCCGGATACGCCAACGAACTCCTCGGTCTGCTCCTCGA
TAGACATCCGGATATCCTCCACGAACGCTCCAAGTCAGGCCACACCATCC
TCCACTCCGCCGCTGCGCTCGGCACGCCCGAGGCATGCGAGTTGCTGCTT
ACTCGCGCGCCGCACCTCCGCACCACATATACAGATTGGGATGTGACGCC
GCTGCACATGGCCATTCTGGAGAAAAATGAGCTGACAGCCTGCTTCCTCA
TCTCGGCAGATATGACCCTGCAGATGCGCCACGGGTACGACCGCACCGAG
CTGTTCCTGGCGGCATGTATGGGCCTGCGCCGCGTCGTGAAGTTGTTGTT
GTCTTCTACGGCGTTCTTTGCGTACCCGCCGCAGAAGTGGGTTTCCGATG
CGAAGGCTGCTGTCCGTGTGGCGCTGTATATGGGGAATACGGAGGTGGTG
GATATGATTAGACGGAATTTGGGATTATCATGGCACTCCTGTCTATCTCA
GTTTCTTACCCGACCCCGGCCTGTCCTGACCTCTACTAGCATTCGGGGGA
TTGAGACTAGGAGATCGAGGAGTAGACGGGCTAGGAGTGTGAGGGGTGAT
ACTACTAATCAACAGTGTTCTGTTGAGGCTGGGAGTTCGGCTGCGTCGCT
GAGTGGGAATGTGAATGTGCCTGCTCCTTCTCATCCGCTCGCTACTGTAA
CCAATCCGGGGACTGATAATCTTATGGACAGCGACGAGGGTGCGGTGGAT
GCTATGAGTCTGGATGCCCAGGTTGATCGGTTTCTGCAAAGTGTTGGTAG
TAATGAATGTGGTAATCTTGGGGTCATGGATACGGTGATGGAGAGCATTG
AGGAGTCGTGAATGCCTTGCACGCCCAGCCCCTTCAAAGCCCCAGTGCCC
AACACCAACCCGGCTCTGGAAGCCGTGGCAGAGAAGCTTCGCGCCAGCGG
CAGCAGAAGACTCCTCACCCCAGAAGGCATCGGGGCGCTCTCCACCTCGA
CGAAGAACATCATCGACAATCTATATATCAATGTCCGAAAGAACTGCTGG
GCAGACGCCATCTGCGAAACCCCAGCAGGCCTCCGCTCTGGTCGAATGGA
CCCCACAGGTAGATGGCACCTTCGTAACCCTCACGTCGCCGCCTTCATCG
ACGACCTCTCCCACGCCATCCAACTCGGCGATATCTCCGACGTCGACTAC
TACCTGTCCCGCAGAATCGCCCTCAACACCTGCGACCGCGAGGGCAACTC
CCTGCTCCACCTAGCACTAGTCTCCGGCCACTTGGACATCGCCCGTCTCC
TCCTCGACAGAGGCGCCAGCCCCCTATACAGCTTTGACCCGGAAGTCCCT
GAGCTCGACCAACTCTTCCAATGCCCCAGCCGCGTTGCGCCCCAGCTCAG
TTCCATCCGCGTCAACATCCTCCGTCTGCTGCTCAGATACGGCGCCCCTA
TCCGCCGCTTCCCCACCCTCAACGTCCTCTTCGACTCCCCCGGATACGCC
AACGAACTCCTCGGTCTGCTCCTCGATAGACATCCGGATATCCTCCACGA
ACGCTCCAAGTCAGGCCACACCATCCTCCACTCCGCCGCTGCGCTCGGCA
CGCCCGAGGCATGCGAGTTGCTGCTTACTCGCGCGCCGCACCTCCGCACC
ACATATACAGATTGGGATGTGACGCCGCTGCACATGGCCATTCTGGAGAA
AAATGAGCTGACAGCCTGCTTCCTCATCTCGGCAGATATGACCCTGCAGA
TGCGCCACGGGTACGACCGCACCGAGCTGTTCCTGGCGGCATGTATGGGC
CTGCGCCGCGTCGTGAAGTTGTTGTTGTCTTCTACGGCGTTCTTTGCGTA
CCCGCCGCAGAAGTGGGTTTCCGATGCGAAGGCTGCTGTCCGTGTGGCGC
TGTATATGGGGAATACGGAGGTGGTGGATATGATTAGACGGAATTTGGGA
TT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008202KJC3_008202Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008202-T1KJC3_008202-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008202-T1.cdsKJC3_008202-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008202-T1.exon2KJC3_008202-T1.exon2Aspergillus niger KJC3exon
KJC3_008202-T1.exon1KJC3_008202-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008202-T1.utr5p1KJC3_008202-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1251997..1253994 -
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