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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1255801..1256960- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008204-T1 ID=KJC3_008204-T1|Name=KJC3_008204-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1160bp|location=Sequence derived from alignment at ch6:1255801..1256960- (Aspergillus niger KJC3)
ACCGTTGCTGTTTTCAATATCCAAGCGAACGGGCTAAGACGGCTGACAGG
TGGGCTAAATGCGGACCAGCCCAATCATTCGCCACCTCAATAACGGCATA
GATGGCCTTTGAAACACATTGACTCGTATTGAAGATCGCACCCTGTTGAG
AGGAGTCGAGACCTGGGGCGCGGCACACCTCGGTAAGTGAGAATCGTGGC
CCTCTTTTCGAGGCTTTCCCCACGCTGCCTGAACGTACGAAGCAGTAAAT
CTTCTGGCACATTTCAATTATTTACATTCGCAAAATGGCTTCAGCTCCCA
CTATCGTTCTGGTACCTGGCGCGTGGTGCACGCCAGTCGTCTATGATACT
CTGCGTGCTACTCTAACCTCGCGTGGTTTACCCTCGACGGCCATCGCCCA
CCCCTCCATTGGTGCGGAGCCACCCTCGAAGACTCTGGCCGATGATGTTG
CCCACTTGCGGTCTGAGTTAGTCTCATTGATCGACAAGGGGAAGGACATC
ATATTAGTGCTACATTCATACGGTGGAGTTGTCGGATCTGGGGCGGTAGA
AGGGTTGGGCAGTGCAGAACGCGCGCAACAGGGAAAGCCTGGTGGAGTTA
TCATGGTAGTGTACATGAGCGCGTTTGCCATACCAAAGGGAAAGAGTCTG
CTGGATATGCTGGGCGGCCGGTTCTTGCCGTTCATGAAGGCGGAGGTGAG
TTCAACATCATCGCGAATTTGCAGCTTTGACCTTACATGATTCAGGGTGA
TTACGTGCACTGTCTCGAAGGAGCTGAATACGGTTTCCACGATATCCCAC
CTGTTGACAGGGAACTGTGGACATCCCGGTTGACACACACTTCTATTGCG
GTATTCTCCGGTGCCTCGACCTTTGAGCCCTGGCATGTCACGCCGACCGC
CTATATCATCTGCGAGGAAGATCGGGCACTTCCGCCGCCAATTCAGGAAC
AGATGGCAGAAATGCTGAGCACGAAGTGGATCTATCGGCTGAAAAGCTCC
CATTCGCCGTACCTGAGCATGCCAGACAAGGTGGCGGATATTCTCGAGGA
ACTCGCGGGCAAGGTTTTGACTAGTGGTGCGGGAATCGCCGCAAATTTGT
GAACTGCATAAACCTAGAATACTTTTTTCCCAAAATTATAAATAGGACGT
AAAATCTGCC back to topCoding sequence (CDS) from alignment at ch6:1255801..1256960- >KJC3_008204-T1 ID=KJC3_008204-T1|Name=KJC3_008204-T1|organism=Aspergillus niger KJC3|type=CDS|length=1536bp|location=Sequence derived from alignment at ch6:1255801..1256960- (Aspergillus niger KJC3)
GGTGATTACGTGCACTGTCTCGAAGGAGCTGAATACGGTTTCCACGATAT
CCCACCTGTTGACAGGGAACTGTGGACATCCCGGTTGACACACACTTCTA
TTGCGGTATTCTCCGGTGCCTCGACCTTTGAGCCCTGGCATGTCACGCCG
ACCGCCTATATCATCTGCGAGGAAGATCGGGCACTTCCGCCGCCAATTCA
GGAACAGATGGCAGAAATGCTGAGCACGAAGTGGATCTATCGGCTGAAAA
GCTCCCATTCGCCGTACCTGAGCATGCCAGACAAGGTGGCGGATATTCTC
GAGGAACTCGCGGGCAAGGTTTTGACTAGTGGTGCGGGAATCGCCGCAAA
TTTGTGAATGGCTTCAGCTCCCACTATCGTTCTGGTACCTGGCGCGTGGT
GCACGCCAGTCGTCTATGATACTCTGCGTGCTACTCTAACCTCGCGTGGT
TTACCCTCGACGGCCATCGCCCACCCCTCCATTGGTGCGGAGCCACCCTC
GAAGACTCTGGCCGATGATGTTGCCCACTTGCGGTCTGAGTTAGTCTCAT
TGATCGACAAGGGGAAGGACATCATATTAGTGCTACATTCATACGGTGGA
GTTGTCGGATCTGGGGCGGTAGAAGGGTTGGGCAGTGCAGAACGCGCGCA
ACAGGGAAAGCCTGGTGGAGTTATCATGGTAGTGTACATGAGCGCGTTTG
CCATACCAAAGGGAAAGAGTCTGCTGGATATGCTGGGCGGCCGGTTCTTG
CCGTTCATGAAGGCGGAGGGTGATTACGTGCACTGTCTCGAAGGAGCTGA
ATACGGTTTCCACGATATCCCACCTGTTGACAGGGAACTGTGGACATCCC
GGTTGACACACACTTCTATTGCGGTATTCTCCGGTGCCTCGACCTTTGAG
CCCTGGCATGTCACGCCGACCGCCTATATCATCTGCGAGGAAGATCGGGC
ACTTCCGCCGCCAATTCAGGAACAGATGGCAGAAATGCTGAGCACGAAGT
GGATCTATCGGCTGAAAAGCTCCCATTCGCCGTACCTGAGCATGCCAGAC
AAGGTGGCGGATATTCTCGAGGAACTCGCGGGCAAGGTTTTGACTAGTGG
TGCGGGAATCGCCGCAAATTTGTGAATGGCTTCAGCTCCCACTATCGTTC
TGGTACCTGGCGCGTGGTGCACGCCAGTCGTCTATGATACTCTGCGTGCT
ACTCTAACCTCGCGTGGTTTACCCTCGACGGCCATCGCCCACCCCTCCAT
TGGTGCGGAGCCACCCTCGAAGACTCTGGCCGATGATGTTGCCCACTTGC
GGTCTGAGTTAGTCTCATTGATCGACAAGGGGAAGGACATCATATTAGTG
CTACATTCATACGGTGGAGTTGTCGGATCTGGGGCGGTAGAAGGGTTGGG
CAGTGCAGAACGCGCGCAACAGGGAAAGCCTGGTGGAGTTATCATGGTAG
TGTACATGAGCGCGTTTGCCATACCAAAGGGAAAGAGTCTGCTGGATATG
CTGGGCGGCCGGTTCTTGCCGTTCATGAAGGCGGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008204-T1.utr3p1 | KJC3_008204-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008204-T1.utr5p1 | KJC3_008204-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.10 |
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1255801..1256960 - |
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