|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1262608..1264364- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008206-T1 ID=KJC3_008206-T1|Name=KJC3_008206-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1757bp|location=Sequence derived from alignment at ch6:1262608..1264364- (Aspergillus niger KJC3)
GCGATCTTCAGCAGCGTCCTCCTAGATTTATCTGGCTCTTACAGCCACCT
GTTATCAGCTCCACACGGCATGACCTACCCATCGACAGCAGCAACATGAG
CGAAGACCAAGACTCGGATTCAGCAACAACTGAGTACCAGTTTGTTTTTG
GTACAGACCAACCAGGCGCCCGCAGCCATGCGATGCGACAGTTCTGGAGA
AGGAGGCACCAAGCCCTCCAAAATTCCCCTCAAACTATTCGACCTCAGCT
TAGAACACTGCTCCCGAAGGATTATAGCTCAGAGAGCAGAGGATACCAGC
AGGACGTGTCCCCAGGTCAGACCCCTGATCCACAAGCGGAGGAAGGTCAA
CCAGGCTCTGCCTACGCGAGGATTTCAGATTCAGACGTCAGTCACGCGCA
GCAGTCCTCGATCATTCAAGGACCTGGCCCGAAGTTCCCAATAGATCTGT
CGGCTAAAGACCAAGAGATCTTTTCGTCATGTGAGTAGAATGCCGGGAGG
AAAAAACGATGCTCTCCAGGCAGCTGATGTCAAGATCTATTCAGGGCTCG
ATTTACATGCTAGTTTTGGCCCCGGCTTGTCACAGAGTACCGGGTTTGAC
CCCGTACGTGATGTCTGGTTGCCTTTGGATCTGTCGAACAGTGCCTCGTT
CTGCGCTCTAATGGCTCATGCGGCAGCTCATGCAGCCCACCGTCAAGGCC
AGACAAGGTCGATAGGATCGGAAAAGTTTAGAACCCTGGCTGTGGGCATC
ATTGCAAAATGGCTGGCCGATGAAAGAAGATCGACACAGGATGACACGAT
CACGGCTATTGCACGTCTCTTGATGTTCGAGGTACGTATTTCCAAACCAG
AGCCTGTATTGAAACACCCATGATTCTCACCAGAGTTTTACTATTCGCAA
TTCAGAAATATTGGGCCATCGATGACCAATGGCGCGCCCATAAAAATGGC
CTTGTCAGCGTTATCAATGCAAGGGGTGGTGTAGAGAGTTTCCGGTCAAG
TTGGCGTCTTCATATGGTGTTATTCCTGTGAGTGCTCATAATCTTCATAC
TAATATCTACAGCCTTTGTGCGCTAACCAGAGTTTTGAGTGCATAGGGCG
TTCTCTCTGGCAGAGCCGTCAAGAAGTTCCTCCCCAGCGCATGTCTGGGA
AATCTCAGAGTACTATTTTCCCGCCACCGTTCATCCAGCACTCGAACTTC
GACTACATCAGGTTAACCCAAAGGCCTCCCAAGGGCTGAGTCCCTACCCT
GAGATCCATGAATTGATAACGTTCCTGGCGTGTTCCTCAAACTTATCGGT
AAACGCATCGCCCAATATCCAAGATCACACGCTCCTCTGTTTATTCATAC
TTGCTGTGATATATCAAGAGTCACTCTACTCGTCGTCCCCGGAAGTCGGT
CGCTCCTTCACCGATAAACTGGCAGTACTAAATGAAGCGCTGTCTAAGAG
CAAGAACGTATGGAAACGCTCCTCGCACGAGCTATATCAATTTCTGATGG
AGGATCATTTCAATCTTCTGCTCAGCCCCTCAGCTCGCAGTTTCATCACC
AAGGTGGCCCAAAACCTGGTTTATTTGAATGAGGACGCACAGGCGGCTGT
CGCAAAATGCCTTCTCAACAAACTACTGTGGCAGAGCCAAGATGTGGAGG
CTGATGCAAACCTCGAAAGTGATGGAACGCTCTAACAATAAGCCGAGTGA
GAAGCTTCTCCGTAATCCTGGATGGAAGACGATCGAGCGGCTCCAAGCCG
ACTGTGA back to topCoding sequence (CDS) from alignment at ch6:1262608..1264364- >KJC3_008206-T1 ID=KJC3_008206-T1|Name=KJC3_008206-T1|organism=Aspergillus niger KJC3|type=CDS|length=5532bp|location=Sequence derived from alignment at ch6:1262608..1264364- (Aspergillus niger KJC3)
GGCGTTCTCTCTGGCAGAGCCGTCAAGAAGTTCCTCCCCAGCGCATGTCT
GGGAAATCTCAGAGTACTATTTTCCCGCCACCGTTCATCCAGCACTCGAA
CTTCGACTACATCAGGTTAACCCAAAGGCCTCCCAAGGGCTGAGTCCCTA
CCCTGAGATCCATGAATTGATAACGTTCCTGGCGTGTTCCTCAAACTTAT
CGGTAAACGCATCGCCCAATATCCAAGATCACACGCTCCTCTGTTTATTC
ATACTTGCTGTGATATATCAAGAGTCACTCTACTCGTCGTCCCCGGAAGT
CGGTCGCTCCTTCACCGATAAACTGGCAGTACTAAATGAAGCGCTGTCTA
AGAGCAAGAACGTATGGAAACGCTCCTCGCACGAGCTATATCAATTTCTG
ATGGAGGATCATTTCAATCTTCTGCTCAGCCCCTCAGCTCGCAGTTTCAT
CACCAAGGTGGCCCAAAACCTGGTTTATTTGAATGAGGACGCACAGGCGG
CTGTCGCAAAATGCCTTCTCAACAAACTACTGTGGCAGAGCCAAGATGTG
GAGGCTGATGCAAACCTCGAAAGTGATGGAACGCTCTAAAAATATTGGGC
CATCGATGACCAATGGCGCGCCCATAAAAATGGCCTTGTCAGCGTTATCA
ATGCAAGGGGTGGTGTAGAGAGTTTCCGGTCAAGTTGGCGTCTTCATATG
GTGTTATTCCTGGCTCGATTTACATGCTAGTTTTGGCCCCGGCTTGTCAC
AGAGTACCGGGTTTGACCCCGTACGTGATGTCTGGTTGCCTTTGGATCTG
TCGAACAGTGCCTCGTTCTGCGCTCTAATGGCTCATGCGGCAGCTCATGC
AGCCCACCGTCAAGGCCAGACAAGGTCGATAGGATCGGAAAAGTTTAGAA
CCCTGGCTGTGGGCATCATTGCAAAATGGCTGGCCGATGAAAGAAGATCG
ACACAGGATGACACGATCACGGCTATTGCACGTCTCTTGATGTTCGAGAT
GAGCGAAGACCAAGACTCGGATTCAGCAACAACTGAGTACCAGTTTGTTT
TTGGTACAGACCAACCAGGCGCCCGCAGCCATGCGATGCGACAGTTCTGG
AGAAGGAGGCACCAAGCCCTCCAAAATTCCCCTCAAACTATTCGACCTCA
GCTTAGAACACTGCTCCCGAAGGATTATAGCTCAGAGAGCAGAGGATACC
AGCAGGACGTGTCCCCAGGTCAGACCCCTGATCCACAAGCGGAGGAAGGT
CAACCAGGCTCTGCCTACGCGAGGATTTCAGATTCAGACGTCAGTCACGC
GCAGCAGTCCTCGATCATTCAAGGACCTGGCCCGAAGTTCCCAATAGATC
TGTCGGCTAAAGACCAAGAGATCTTTTCGTCATGGCGTTCTCTCTGGCAG
AGCCGTCAAGAAGTTCCTCCCCAGCGCATGTCTGGGAAATCTCAGAGTAC
TATTTTCCCGCCACCGTTCATCCAGCACTCGAACTTCGACTACATCAGGT
TAACCCAAAGGCCTCCCAAGGGCTGAGTCCCTACCCTGAGATCCATGAAT
TGATAACGTTCCTGGCGTGTTCCTCAAACTTATCGGTAAACGCATCGCCC
AATATCCAAGATCACACGCTCCTCTGTTTATTCATACTTGCTGTGATATA
TCAAGAGTCACTCTACTCGTCGTCCCCGGAAGTCGGTCGCTCCTTCACCG
ATAAACTGGCAGTACTAAATGAAGCGCTGTCTAAGAGCAAGAACGTATGG
AAACGCTCCTCGCACGAGCTATATCAATTTCTGATGGAGGATCATTTCAA
TCTTCTGCTCAGCCCCTCAGCTCGCAGTTTCATCACCAAGGTGGCCCAAA
ACCTGGTTTATTTGAATGAGGACGCACAGGCGGCTGTCGCAAAATGCCTT
CTCAACAAACTACTGTGGCAGAGCCAAGATGTGGAGGCTGATGCAAACCT
CGAAAGTGATGGAACGCTCTAAAAATATTGGGCCATCGATGACCAATGGC
GCGCCCATAAAAATGGCCTTGTCAGCGTTATCAATGCAAGGGGTGGTGTA
GAGAGTTTCCGGTCAAGTTGGCGTCTTCATATGGTGTTATTCCTGGCTCG
ATTTACATGCTAGTTTTGGCCCCGGCTTGTCACAGAGTACCGGGTTTGAC
CCCGTACGTGATGTCTGGTTGCCTTTGGATCTGTCGAACAGTGCCTCGTT
CTGCGCTCTAATGGCTCATGCGGCAGCTCATGCAGCCCACCGTCAAGGCC
AGACAAGGTCGATAGGATCGGAAAAGTTTAGAACCCTGGCTGTGGGCATC
ATTGCAAAATGGCTGGCCGATGAAAGAAGATCGACACAGGATGACACGAT
CACGGCTATTGCACGTCTCTTGATGTTCGAGATGAGCGAAGACCAAGACT
CGGATTCAGCAACAACTGAGTACCAGTTTGTTTTTGGTACAGACCAACCA
GGCGCCCGCAGCCATGCGATGCGACAGTTCTGGAGAAGGAGGCACCAAGC
CCTCCAAAATTCCCCTCAAACTATTCGACCTCAGCTTAGAACACTGCTCC
CGAAGGATTATAGCTCAGAGAGCAGAGGATACCAGCAGGACGTGTCCCCA
GGTCAGACCCCTGATCCACAAGCGGAGGAAGGTCAACCAGGCTCTGCCTA
CGCGAGGATTTCAGATTCAGACGTCAGTCACGCGCAGCAGTCCTCGATCA
TTCAAGGACCTGGCCCGAAGTTCCCAATAGATCTGTCGGCTAAAGACCAA
GAGATCTTTTCGTCATGGCGTTCTCTCTGGCAGAGCCGTCAAGAAGTTCC
TCCCCAGCGCATGTCTGGGAAATCTCAGAGTACTATTTTCCCGCCACCGT
TCATCCAGCACTCGAACTTCGACTACATCAGGTTAACCCAAAGGCCTCCC
AAGGGCTGAGTCCCTACCCTGAGATCCATGAATTGATAACGTTCCTGGCG
TGTTCCTCAAACTTATCGGTAAACGCATCGCCCAATATCCAAGATCACAC
GCTCCTCTGTTTATTCATACTTGCTGTGATATATCAAGAGTCACTCTACT
CGTCGTCCCCGGAAGTCGGTCGCTCCTTCACCGATAAACTGGCAGTACTA
AATGAAGCGCTGTCTAAGAGCAAGAACGTATGGAAACGCTCCTCGCACGA
GCTATATCAATTTCTGATGGAGGATCATTTCAATCTTCTGCTCAGCCCCT
CAGCTCGCAGTTTCATCACCAAGGTGGCCCAAAACCTGGTTTATTTGAAT
GAGGACGCACAGGCGGCTGTCGCAAAATGCCTTCTCAACAAACTACTGTG
GCAGAGCCAAGATGTGGAGGCTGATGCAAACCTCGAAAGTGATGGAACGC
TCTAAAAATATTGGGCCATCGATGACCAATGGCGCGCCCATAAAAATGGC
CTTGTCAGCGTTATCAATGCAAGGGGTGGTGTAGAGAGTTTCCGGTCAAG
TTGGCGTCTTCATATGGTGTTATTCCTGGCTCGATTTACATGCTAGTTTT
GGCCCCGGCTTGTCACAGAGTACCGGGTTTGACCCCGTACGTGATGTCTG
GTTGCCTTTGGATCTGTCGAACAGTGCCTCGTTCTGCGCTCTAATGGCTC
ATGCGGCAGCTCATGCAGCCCACCGTCAAGGCCAGACAAGGTCGATAGGA
TCGGAAAAGTTTAGAACCCTGGCTGTGGGCATCATTGCAAAATGGCTGGC
CGATGAAAGAAGATCGACACAGGATGACACGATCACGGCTATTGCACGTC
TCTTGATGTTCGAGATGAGCGAAGACCAAGACTCGGATTCAGCAACAACT
GAGTACCAGTTTGTTTTTGGTACAGACCAACCAGGCGCCCGCAGCCATGC
GATGCGACAGTTCTGGAGAAGGAGGCACCAAGCCCTCCAAAATTCCCCTC
AAACTATTCGACCTCAGCTTAGAACACTGCTCCCGAAGGATTATAGCTCA
GAGAGCAGAGGATACCAGCAGGACGTGTCCCCAGGTCAGACCCCTGATCC
ACAAGCGGAGGAAGGTCAACCAGGCTCTGCCTACGCGAGGATTTCAGATT
CAGACGTCAGTCACGCGCAGCAGTCCTCGATCATTCAAGGACCTGGCCCG
AAGTTCCCAATAGATCTGTCGGCTAAAGACCAAGAGATCTTTTCGTCATG
GCGTTCTCTCTGGCAGAGCCGTCAAGAAGTTCCTCCCCAGCGCATGTCTG
GGAAATCTCAGAGTACTATTTTCCCGCCACCGTTCATCCAGCACTCGAAC
TTCGACTACATCAGGTTAACCCAAAGGCCTCCCAAGGGCTGAGTCCCTAC
CCTGAGATCCATGAATTGATAACGTTCCTGGCGTGTTCCTCAAACTTATC
GGTAAACGCATCGCCCAATATCCAAGATCACACGCTCCTCTGTTTATTCA
TACTTGCTGTGATATATCAAGAGTCACTCTACTCGTCGTCCCCGGAAGTC
GGTCGCTCCTTCACCGATAAACTGGCAGTACTAAATGAAGCGCTGTCTAA
GAGCAAGAACGTATGGAAACGCTCCTCGCACGAGCTATATCAATTTCTGA
TGGAGGATCATTTCAATCTTCTGCTCAGCCCCTCAGCTCGCAGTTTCATC
ACCAAGGTGGCCCAAAACCTGGTTTATTTGAATGAGGACGCACAGGCGGC
TGTCGCAAAATGCCTTCTCAACAAACTACTGTGGCAGAGCCAAGATGTGG
AGGCTGATGCAAACCTCGAAAGTGATGGAACGCTCTAAAAATATTGGGCC
ATCGATGACCAATGGCGCGCCCATAAAAATGGCCTTGTCAGCGTTATCAA
TGCAAGGGGTGGTGTAGAGAGTTTCCGGTCAAGTTGGCGTCTTCATATGG
TGTTATTCCTGGCTCGATTTACATGCTAGTTTTGGCCCCGGCTTGTCACA
GAGTACCGGGTTTGACCCCGTACGTGATGTCTGGTTGCCTTTGGATCTGT
CGAACAGTGCCTCGTTCTGCGCTCTAATGGCTCATGCGGCAGCTCATGCA
GCCCACCGTCAAGGCCAGACAAGGTCGATAGGATCGGAAAAGTTTAGAAC
CCTGGCTGTGGGCATCATTGCAAAATGGCTGGCCGATGAAAGAAGATCGA
CACAGGATGACACGATCACGGCTATTGCACGTCTCTTGATGTTCGAGATG
AGCGAAGACCAAGACTCGGATTCAGCAACAACTGAGTACCAGTTTGTTTT
TGGTACAGACCAACCAGGCGCCCGCAGCCATGCGATGCGACAGTTCTGGA
GAAGGAGGCACCAAGCCCTCCAAAATTCCCCTCAAACTATTCGACCTCAG
CTTAGAACACTGCTCCCGAAGGATTATAGCTCAGAGAGCAGAGGATACCA
GCAGGACGTGTCCCCAGGTCAGACCCCTGATCCACAAGCGGAGGAAGGTC
AACCAGGCTCTGCCTACGCGAGGATTTCAGATTCAGACGTCAGTCACGCG
CAGCAGTCCTCGATCATTCAAGGACCTGGCCCGAAGTTCCCAATAGATCT
GTCGGCTAAAGACCAAGAGATCTTTTCGTCAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008206-T1.utr3p1 | KJC3_008206-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008206-T1.utr5p1 | KJC3_008206-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.10 |
| DBxref | InterPro:IPR021858 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1262608..1264364 - |
|
