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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1270256..1272436+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008208-T1 ID=KJC3_008208-T1|Name=KJC3_008208-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2181bp|location=Sequence derived from alignment at ch6:1270256..1272436+ (Aspergillus niger KJC3)
GCATCGCATCTCTACTGTTTTTTTCTACAGTCTTTCATCTAAAGATCATC
TCATCTTTCAATCCCATCCATCATCATGGCAATGGTATCCAACGGCAACG
AATACGATTTCATCATCGTCGGTGGTGGTACGGCAGGCAACGCAGTAGCT
GGTCGCCTCGCTGAAAACCCCAACGTCCGTGTCTTGGTCGTCGAAGCTGG
TATTCCCAACCCTGACCAGGTCGACGAAATCACTACTCCCTCCAAAGCCT
TCAATCTCCGAGGAAGCAAGTATGACTGGGCCTACAAGACCACCATGATC
AAGCGCGACGACTACGAGCGTGTCGAAAAGCCCAACACTCGTGGCAAAGC
TCTTGGTGGAAGTTCTTGTGCCAATTACTTCACCTGGATTCCCGGCTCCA
AGCCCACCTTCGATGACTGGGAAGCCTTTGGTGGCCACGACTGGACTTGG
GACAACTGTGTCGAGTATCTCCGCAAGTGCGCAACCTATCATGATGATGA
GAAGCTTTACCCGGCCGAGCTGAGCAAGATCGGCACCGGAGGCCCCGTTC
AGATCGCCCATGCCGACTTGGTTCCGGAAATGCAGCCCTTCCGTGACGCA
CTGACCCAAGCGTGGGTCTCCAAGGGCGAGAAGCTGACTGAGGACATTTA
CTCCGGTGAGATGCGCGGTCTCACCCACTGCGTGGACACCATCTACAATG
GCCAGCGCCAGGGCAGCTTCCTCTACCTCAAGGACAAGCCGAACGTGACA
ATCCTCTACGGAGCCCACTCAAAGCAGTTGATCATCGACCCCGTCACTCG
CATCTGCTCCGGAGTGACCGTCGTCAGCGAAGCTTACAACACCGAGATCA
GCGTCTACGCCAGCCGGGAAGTGATCCTCTCCCAGGGTGTATTCGAGACC
CCCAAGCTCCTGATGCTGAGTGGAATCGGCCCAGCCGCAGAGCTAGCCAA
ACACAACATCACTCCCATCGTTGAATCTCCCCACGTTGGCCAACATCTTC
TCGACCACCCCATCGTGCCCTTCGTTCTCCGCCTCAAAGACGGCTACGGT
CTGGAAGACCACATCCTCCGTCCCGGCCCCACCAACAACGCAGCCATTGC
CCAGTACAAGAAAGACAAGACAGGTCCCATCAGCTCCGGACTCCTGGAAC
TAGTCGGCTTCCCACGCATTGACCAGCGTCTTGAGAAGTACCCCGCCTAC
CGCGAAGCCAAGGCCGCCAATGGCGGACTGGACCCCTTCGGACCAGCAGG
ACAGCCACACTTCGAGCTCGACTTCGTCGGCATGTTCAGCACCGCCTTCC
AATGGCACTACCCCGTCCCGGAAGAGGGCAACCACATGACTGTGATTGTC
GACCTGCTGCGCCCCTTGTCAGAGGGTGAGGTGACGCTCAACAGCTCGAA
CCCCTTGGTGCAGCCTAACATCAACCTCAACTTCTTCGGCAATGACCTCG
ATATTCTGGCCATGCGCGAGGGCGTCAGATGGACCTATGACCTCTTGACC
AGTGGTGCCGGCTTCAAGGATCTCGTCGTGTCAGAGTACCCATGGAAGAT
GCCTCTTCAGTCCGATGACGAGATGAAGCGCGCTGTTTTGGATCGCAGCC
AGACTGGATTCCGTAAGTCTCCACAGTACTCTATTTTCATTGGGCCTTGA
TACTGACTAAAATTACGACAGACCCATGCGGTACTGCCCGTCTCTCCAAG
AGTATCCATCAGGGTGTGGTTGACTCGAAGCTCCGCGTGCACGGAGTGCG
CAACCTCCGCATCGCAGATGCGTCTATCATCCCTGTGATTCCGGACTGTC
GGATCCAGAACTCGGTGTACATGATCGGCGAGAAGGTAAGTCACCATTTC
CTCTCACGGACTATTTTCAATGTTGTCAGGGCTAACGAGTATCCAGGGCG
CGGATATTATCAAGGCCGACCACAAGGATCTGTACGAGTCGAAGAACATC
CCGTACTTTGTTCCGAGTCGGTTGTGATTACGTCAGCGTATCATGAATAT
GGCTGTGATATGAGTGTATTGGGAGATTGTATGGATGGATATTGGTGATA
TGATAGCTTTTTGCATTGATCTTTAGTCCGTACATCATGAATCGATTTGA
AGTTGTGCCAGTCTTTACGAACATTGAACATTGTTGTACTCTATACATCT
AATAATGGAACTAATGATGAAAAGAATAAAG back to topCoding sequence (CDS) from alignment at ch6:1270256..1272436+ >KJC3_008208-T1 ID=KJC3_008208-T1|Name=KJC3_008208-T1|organism=Aspergillus niger KJC3|type=CDS|length=5346bp|location=Sequence derived from alignment at ch6:1270256..1272436+ (Aspergillus niger KJC3)
ATGGCAATGGTATCCAACGGCAACGAATACGATTTCATCATCGTCGGTGG
TGGTACGGCAGGCAACGCAGTAGCTGGTCGCCTCGCTGAAAACCCCAACG
TCCGTGTCTTGGTCGTCGAAGCTGGTATTCCCAACCCTGACCAGGTCGAC
GAAATCACTACTCCCTCCAAAGCCTTCAATCTCCGAGGAAGCAAGTATGA
CTGGGCCTACAAGACCACCATGATCAAGCGCGACGACTACGAGCGTGTCG
AAAAGCCCAACACTCGTGGCAAAGCTCTTGGTGGAAGTTCTTGTGCCAAT
TACTTCACCTGGATTCCCGGCTCCAAGCCCACCTTCGATGACTGGGAAGC
CTTTGGTGGCCACGACTGGACTTGGGACAACTGTGTCGAGTATCTCCGCA
AGTGCGCAACCTATCATGATGATGAGAAGCTTTACCCGGCCGAGCTGAGC
AAGATCGGCACCGGAGGCCCCGTTCAGATCGCCCATGCCGACTTGGTTCC
GGAAATGCAGCCCTTCCGTGACGCACTGACCCAAGCGTGGGTCTCCAAGG
GCGAGAAGCTGACTGAGGACATTTACTCCGGTGAGATGCGCGGTCTCACC
CACTGCGTGGACACCATCTACAATGGCCAGCGCCAGGGCAGCTTCCTCTA
CCTCAAGGACAAGCCGAACGTGACAATCCTCTACGGAGCCCACTCAAAGC
AGTTGATCATCGACCCCGTCACTCGCATCTGCTCCGGAGTGACCGTCGTC
AGCGAAGCTTACAACACCGAGATCAGCGTCTACGCCAGCCGGGAAGTGAT
CCTCTCCCAGGGTGTATTCGAGACCCCCAAGCTCCTGATGCTGAGTGGAA
TCGGCCCAGCCGCAGAGCTAGCCAAACACAACATCACTCCCATCGTTGAA
TCTCCCCACGTTGGCCAACATCTTCTCGACCACCCCATCGTGCCCTTCGT
TCTCCGCCTCAAAGACGGCTACGGTCTGGAAGACCACATCCTCCGTCCCG
GCCCCACCAACAACGCAGCCATTGCCCAGTACAAGAAAGACAAGACAGGT
CCCATCAGCTCCGGACTCCTGGAACTAGTCGGCTTCCCACGCATTGACCA
GCGTCTTGAGAAGTACCCCGCCTACCGCGAAGCCAAGGCCGCCAATGGCG
GACTGGACCCCTTCGGACCAGCAGGACAGCCACACTTCGAGCTCGACTTC
GTCGGCATGTTCAGCACCGCCTTCCAATGGCACTACCCCGTCCCGGAAGA
GGGCAACCACATGACTGTGATTGTCGACCTGCTGCGCCCCTTGTCAGAGG
GTGAGGTGACGCTCAACAGCTCGAACCCCTTGGTGCAGCCTAACATCAAC
CTCAACTTCTTCGGCAATGACCTCGATATTCTGGCCATGCGCGAGGGCGT
CAGATGGACCTATGACCTCTTGACCAGTGGTGCCGGCTTCAAGGATCTCG
TCGTGTCAGAGTACCCATGGAAGATGCCTCTTCAGTCCGATGACGAGATG
AAGCGCGCTGTTTTGGATCGCAGCCAGACTGGATTCCACCCATGCGGTAC
TGCCCGTCTCTCCAAGAGTATCCATCAGGGTGTGGTTGACTCGAAGCTCC
GCGTGCACGGAGTGCGCAACCTCCGCATCGCAGATGCGTCTATCATCCCT
GTGATTCCGGACTGTCGGATCCAGAACTCGGTGTACATGATCGGCGAGAA
GGGCGCGGATATTATCAAGGCCGACCACAAGGATCTGTACGAGTCGAAGA
ACATCCCGTACTTTGTTCCGAGTCGGTTGTGAATGGCAATGGTATCCAAC
GGCAACGAATACGATTTCATCATCGTCGGTGGTGGTACGGCAGGCAACGC
AGTAGCTGGTCGCCTCGCTGAAAACCCCAACGTCCGTGTCTTGGTCGTCG
AAGCTGGTATTCCCAACCCTGACCAGGTCGACGAAATCACTACTCCCTCC
AAAGCCTTCAATCTCCGAGGAAGCAAGTATGACTGGGCCTACAAGACCAC
CATGATCAAGCGCGACGACTACGAGCGTGTCGAAAAGCCCAACACTCGTG
GCAAAGCTCTTGGTGGAAGTTCTTGTGCCAATTACTTCACCTGGATTCCC
GGCTCCAAGCCCACCTTCGATGACTGGGAAGCCTTTGGTGGCCACGACTG
GACTTGGGACAACTGTGTCGAGTATCTCCGCAAGTGCGCAACCTATCATG
ATGATGAGAAGCTTTACCCGGCCGAGCTGAGCAAGATCGGCACCGGAGGC
CCCGTTCAGATCGCCCATGCCGACTTGGTTCCGGAAATGCAGCCCTTCCG
TGACGCACTGACCCAAGCGTGGGTCTCCAAGGGCGAGAAGCTGACTGAGG
ACATTTACTCCGGTGAGATGCGCGGTCTCACCCACTGCGTGGACACCATC
TACAATGGCCAGCGCCAGGGCAGCTTCCTCTACCTCAAGGACAAGCCGAA
CGTGACAATCCTCTACGGAGCCCACTCAAAGCAGTTGATCATCGACCCCG
TCACTCGCATCTGCTCCGGAGTGACCGTCGTCAGCGAAGCTTACAACACC
GAGATCAGCGTCTACGCCAGCCGGGAAGTGATCCTCTCCCAGGGTGTATT
CGAGACCCCCAAGCTCCTGATGCTGAGTGGAATCGGCCCAGCCGCAGAGC
TAGCCAAACACAACATCACTCCCATCGTTGAATCTCCCCACGTTGGCCAA
CATCTTCTCGACCACCCCATCGTGCCCTTCGTTCTCCGCCTCAAAGACGG
CTACGGTCTGGAAGACCACATCCTCCGTCCCGGCCCCACCAACAACGCAG
CCATTGCCCAGTACAAGAAAGACAAGACAGGTCCCATCAGCTCCGGACTC
CTGGAACTAGTCGGCTTCCCACGCATTGACCAGCGTCTTGAGAAGTACCC
CGCCTACCGCGAAGCCAAGGCCGCCAATGGCGGACTGGACCCCTTCGGAC
CAGCAGGACAGCCACACTTCGAGCTCGACTTCGTCGGCATGTTCAGCACC
GCCTTCCAATGGCACTACCCCGTCCCGGAAGAGGGCAACCACATGACTGT
GATTGTCGACCTGCTGCGCCCCTTGTCAGAGGGTGAGGTGACGCTCAACA
GCTCGAACCCCTTGGTGCAGCCTAACATCAACCTCAACTTCTTCGGCAAT
GACCTCGATATTCTGGCCATGCGCGAGGGCGTCAGATGGACCTATGACCT
CTTGACCAGTGGTGCCGGCTTCAAGGATCTCGTCGTGTCAGAGTACCCAT
GGAAGATGCCTCTTCAGTCCGATGACGAGATGAAGCGCGCTGTTTTGGAT
CGCAGCCAGACTGGATTCCACCCATGCGGTACTGCCCGTCTCTCCAAGAG
TATCCATCAGGGTGTGGTTGACTCGAAGCTCCGCGTGCACGGAGTGCGCA
ACCTCCGCATCGCAGATGCGTCTATCATCCCTGTGATTCCGGACTGTCGG
ATCCAGAACTCGGTGTACATGATCGGCGAGAAGGGCGCGGATATTATCAA
GGCCGACCACAAGGATCTGTACGAGTCGAAGAACATCCCGTACTTTGTTC
CGAGTCGGTTGTGAATGGCAATGGTATCCAACGGCAACGAATACGATTTC
ATCATCGTCGGTGGTGGTACGGCAGGCAACGCAGTAGCTGGTCGCCTCGC
TGAAAACCCCAACGTCCGTGTCTTGGTCGTCGAAGCTGGTATTCCCAACC
CTGACCAGGTCGACGAAATCACTACTCCCTCCAAAGCCTTCAATCTCCGA
GGAAGCAAGTATGACTGGGCCTACAAGACCACCATGATCAAGCGCGACGA
CTACGAGCGTGTCGAAAAGCCCAACACTCGTGGCAAAGCTCTTGGTGGAA
GTTCTTGTGCCAATTACTTCACCTGGATTCCCGGCTCCAAGCCCACCTTC
GATGACTGGGAAGCCTTTGGTGGCCACGACTGGACTTGGGACAACTGTGT
CGAGTATCTCCGCAAGTGCGCAACCTATCATGATGATGAGAAGCTTTACC
CGGCCGAGCTGAGCAAGATCGGCACCGGAGGCCCCGTTCAGATCGCCCAT
GCCGACTTGGTTCCGGAAATGCAGCCCTTCCGTGACGCACTGACCCAAGC
GTGGGTCTCCAAGGGCGAGAAGCTGACTGAGGACATTTACTCCGGTGAGA
TGCGCGGTCTCACCCACTGCGTGGACACCATCTACAATGGCCAGCGCCAG
GGCAGCTTCCTCTACCTCAAGGACAAGCCGAACGTGACAATCCTCTACGG
AGCCCACTCAAAGCAGTTGATCATCGACCCCGTCACTCGCATCTGCTCCG
GAGTGACCGTCGTCAGCGAAGCTTACAACACCGAGATCAGCGTCTACGCC
AGCCGGGAAGTGATCCTCTCCCAGGGTGTATTCGAGACCCCCAAGCTCCT
GATGCTGAGTGGAATCGGCCCAGCCGCAGAGCTAGCCAAACACAACATCA
CTCCCATCGTTGAATCTCCCCACGTTGGCCAACATCTTCTCGACCACCCC
ATCGTGCCCTTCGTTCTCCGCCTCAAAGACGGCTACGGTCTGGAAGACCA
CATCCTCCGTCCCGGCCCCACCAACAACGCAGCCATTGCCCAGTACAAGA
AAGACAAGACAGGTCCCATCAGCTCCGGACTCCTGGAACTAGTCGGCTTC
CCACGCATTGACCAGCGTCTTGAGAAGTACCCCGCCTACCGCGAAGCCAA
GGCCGCCAATGGCGGACTGGACCCCTTCGGACCAGCAGGACAGCCACACT
TCGAGCTCGACTTCGTCGGCATGTTCAGCACCGCCTTCCAATGGCACTAC
CCCGTCCCGGAAGAGGGCAACCACATGACTGTGATTGTCGACCTGCTGCG
CCCCTTGTCAGAGGGTGAGGTGACGCTCAACAGCTCGAACCCCTTGGTGC
AGCCTAACATCAACCTCAACTTCTTCGGCAATGACCTCGATATTCTGGCC
ATGCGCGAGGGCGTCAGATGGACCTATGACCTCTTGACCAGTGGTGCCGG
CTTCAAGGATCTCGTCGTGTCAGAGTACCCATGGAAGATGCCTCTTCAGT
CCGATGACGAGATGAAGCGCGCTGTTTTGGATCGCAGCCAGACTGGATTC
CACCCATGCGGTACTGCCCGTCTCTCCAAGAGTATCCATCAGGGTGTGGT
TGACTCGAAGCTCCGCGTGCACGGAGTGCGCAACCTCCGCATCGCAGATG
CGTCTATCATCCCTGTGATTCCGGACTGTCGGATCCAGAACTCGGTGTAC
ATGATCGGCGAGAAGGGCGCGGATATTATCAAGGCCGACCACAAGGATCT
GTACGAGTCGAAGAACATCCCGTACTTTGTTCCGAGTCGGTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008208-T1.utr5p1 | KJC3_008208-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008208-T1.utr3p1 | KJC3_008208-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.10 |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1270256..1272436 + |
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