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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1289171..1292062+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008214-T1 ID=KJC3_008214-T1|Name=KJC3_008214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2892bp|location=Sequence derived from alignment at ch6:1289171..1292062+ (Aspergillus niger KJC3)
CACCACCTCTTGATTGATTCACCACGCACTTGACTGCATCGGGCTGGCCT
GGACGGGCACGGTCCCTCCCTTCGGCTGCTTCCTGCACTCCCATCCGCTT
ACTCATGCAATTCATCGCTCAATGCAGTCCTGTTCTTCTGTGCAAAGGGG
GAGATCAAGGTGATGGATGAAAATGGAATGGAATGCAAGACGCAGCATGT
GAAAACTATCAATTGAGAATTCCATTCAAGCCCTTCAGTGATAAAACCAA
GTCACCAAGATGAATGTCCCACTCCGCTGTCCAAGATCACCAGACTTCCC
GACTAGGGAATTAGTGGAGCACGTGTGGTAAATTCTAGAACCCCAAGGCA
AAAGGGGGCAGCCGCACAAATATGTCCTGCCAGTGATGCCCTTAGGCATT
TTTCTTCTTTCTCTCCTCATTTTTCGTCGACCATGCACTGTGAGTTGGTT
TGTATTTCACGGGCATTGTGTGCATAGTACCGGCCATTGCAGTGGTGTGG
TGATCCATGCTCTGCTACTAAGCACCCCGGCCAGTTTCACTAGCAACAGA
GCACCAGACTCGGTGGAACACTGTGTCTGACTACGCATCGTAGACTGCTT
TGGATTTACAGGGTCTACATCTGACGGTGGTCTCAGTCGCACCGCTCCGA
CAAATGCTGTCTAAACTGCTCTACGACATTCAGGAGCTCCCGCCTGACCA
TCGCGTTGTCGCGGGACAGCGGCACCGACGCTTGCTCTATTACGTAGCCC
ATCTGGCATCATGGACCTCCAACCTTTATCTCGTCCTTCGCCTAGCTCTG
TGTTTCTCTGCTGTGCAACAAAATTGGCGAGCCTGGCTAACTCTGTTGGT
CGAGACCGTTCTCGCCAGTATGTCTATACCACCGTGAACTGCCGTGTTTC
GACACGCCGGCTCCCTTTTCGAGCAAACGAGGACGCGCAAGCTAATATGT
TTTCAGTCATTTGGCGTCATGATCAGCTTCTCACCATGTTAGGTGGTTCG
GCATCAGAGAGCCAACCACGCAAAAGACTGCGATTACACGGCACCGACGA
TCTACCGCAGGTGGACATTTTGGTGCCCTGCTGCGGAGAGCCTGTCGACG
TCATTTTGGACACCGTGCGTGCTGCCTGTACAATGGACTATCCAGTTTCC
AGCTTCCGGGTCCGTGTATTGGACGATGGTGCTTCCACAGAGCTCGAGTC
CGCCGTTGCAGCACTGCGCACTGAATGGCCTCACCTCTTCTACCACACGC
GCGGAAGGCAATCCGGTAAGGTCTTCGCCAAGGCTGGTAACATGAATTAC
GCCCTGTTCACCCTGCAAGAAAAGGCTCCACCTGAGTTTTGTGCCATCTT
CGATGCAGACTCCATCCCCATGCCTCACTTTCTGAGGGCGACGTTGCCCC
ATCTCCTTCAGACCCCGGAAGCCGTGCTCCTCACCACCCGGCAGTACTTT
TACAACCTCCCATCAGGTGACCCCCTTTCCCAGTCACGCCTCCACTTCTA
CACCTGTGAAAATGCAGAGCTCGATCGTCGAGGTCTTGCTCAGGATGCAG
GCTCCGGGGCCCTCTTCCGGAGACAAGCCATCATCGATGCAGGTGGATAT
CCGACGTACAGCTTCTCCGAGGATTGGCAGCTGTCGCTTGTTCTGAAGGG
GCTAGGCCACCGCACCATCCAAGTCCAGGAGCCGTTACAATTCGGATTGG
TTCCGACGTCCTTGGATGGACACATTGCACAGCGCAACCGGTGGCACATT
GGCCACTCTCAACAGCTTCGGGTGTTGATGCCGCCCACAAACAAGACACT
TCCCCGCTCGCTGCAGTGGAGTATTGCACAGAATGGCGTCTTCATCATGG
CTGGAGGCCTTGGCTGTTTGATTTCATTTGCAATGGTTCCATTGCTTCTG
GCATCGGGTCAGCTGGTCCCAGACATTTCGCCATTGCTGGCCAAAGCACA
GTTTCTTCTGGCTGTTCTCCATATCGCCTTGACATGGGCGTATGGACTTT
TGCAAAGCGCGCACACGGGATTCGAAAGCTTTCCGTTTTCTCGTTTTGAA
AATATCTGGCTGGCAGGAGGTAAGATACATACCTTTGTTTTTTATTGTTC
TGTTGTACAGTTGCGTATTGTCATTACCCGTTCTATTATGGTCTTGAATG
GTTCCTGGACTTCACCTTCTACCACTTTGTTCCTGATATTCTCTCACCCT
GCGTCCCTCCGCGATAGGAGTTCTCTCTCTCTCATTCTACCACTCTTCAA
GATGAAACTAACAATAACAGCTCACATGCACGCCGTCGCTCGATTCCACC
TGCTCGCCAGCCGACCCAAAGGCTCCTTCGTAACTGGCAGCAGCGCCAAC
TCATGGAATTGCAGCGCGACCCCAACATCCTTCCAGAAGCTCTACCACAA
TCTGTGGCACAACGGGATCGCATACAGCATTGTCGTTTTGCTTGCCACTA
TCGCATCCATCGTCTACTCGATCTACACGGCTATCACAACCACTGATGAT
AGGCTGTTATCCCGCTTGCTCACCACGATTGCTTGGCCGCCGATGCTTCA
CATCTGCTACCTCTCCATCGTCAGTTACTGGGCACCAGTCTCATATCTGC
TGAACCCGCCGCGGTATCCGGAGCGGAAGGCTGGATTGGCTTTGTCGGAG
ACGGGCGTGGTGCTTCCGAGTCCGGAGGTCCAGCAAGCAGCTATGGTGCT
TGGGAAAGCACCGGTTGGGTTCTATCGTCAGTGCGTGGTGGTCGTGTTGG
TTCTGGGGGGGTTATTGTTGGGTGGATTGACGTTGTGAAAGGTAGAAGAG
ATAGAGTGGGTGCGCTACTAGATTAGATTGTAAGCAAATACGACGGTAGT
GTTAGGTGGTCTAGATATGGTAATTCATGCTGTTTGTCTCAG back to topCoding sequence (CDS) from alignment at ch6:1289171..1292062+ >KJC3_008214-T1 ID=KJC3_008214-T1|Name=KJC3_008214-T1|organism=Aspergillus niger KJC3|type=CDS|length=4092bp|location=Sequence derived from alignment at ch6:1289171..1292062+ (Aspergillus niger KJC3)
ATGCTGTCTAAACTGCTCTACGACATTCAGGAGCTCCCGCCTGACCATCG
CGTTGTCGCGGGACAGCGGCACCGACGCTTGCTCTATTACGTAGCCCATC
TGGCATCATGGACCTCCAACCTTTATCTCGTCCTTCGCCTAGCTCTGTGT
TTCTCTGCTGTGCAACAAAATTGGCGAGCCTGGCTAACTCTGTTGGTCGA
GACCGTTCTCGCCATCATTTGGCGTCATGATCAGCTTCTCACCATGTTAG
GTGGTTCGGCATCAGAGAGCCAACCACGCAAAAGACTGCGATTACACGGC
ACCGACGATCTACCGCAGGTGGACATTTTGGTGCCCTGCTGCGGAGAGCC
TGTCGACGTCATTTTGGACACCGTGCGTGCTGCCTGTACAATGGACTATC
CAGTTTCCAGCTTCCGGGTCCGTGTATTGGACGATGGTGCTTCCACAGAG
CTCGAGTCCGCCGTTGCAGCACTGCGCACTGAATGGCCTCACCTCTTCTA
CCACACGCGCGGAAGGCAATCCGGTAAGGTCTTCGCCAAGGCTGGTAACA
TGAATTACGCCCTGTTCACCCTGCAAGAAAAGGCTCCACCTGAGTTTTGT
GCCATCTTCGATGCAGACTCCATCCCCATGCCTCACTTTCTGAGGGCGAC
GTTGCCCCATCTCCTTCAGACCCCGGAAGCCGTGCTCCTCACCACCCGGC
AGTACTTTTACAACCTCCCATCAGGTGACCCCCTTTCCCAGTCACGCCTC
CACTTCTACACCTGTGAAAATGCAGAGCTCGATCGTCGAGGTCTTGCTCA
GGATGCAGGCTCCGGGGCCCTCTTCCGGAGACAAGCCATCATCGATGCAG
GTGGATATCCGACGTACAGCTTCTCCGAGGATTGGCAGCTGTCGCTTGTT
CTGAAGGGGCTAGGCCACCGCACCATCCAAGTCCAGGAGCCGTTACAATT
CGGATTGGTTCCGACGTCCTTGGATGGACACATTGCACAGCGCAACCGGT
GGCACATTGGCCACTCTCAACAGCTTCGGGTGTTGATGCCGCCCACAAAC
AAGACACTTCCCCGCTCGCTGCAGTGGAGTATTGCACAGAATGGCGTCTT
CATCATGGCTGGAGGCCTTGGCTGTTTGATTTCATTTGCAATGGTTCCAT
TGCTTCTGGCATCGGGTCAGCTGGTCCCAGACATTTCGCCATTGCTGGCC
AAAGCACAGTTTCTTCTGGCTGTTCTCCATATCGCCTTGACATGGGCGTA
TGGACTTTTGCAAAGCGCGCACACGGGATTCGAAAGCTTTCCGTTTTCTC
GTTTTGAAAATATCTGGCTGGCAGGAGGTAAGATACATACCTTTGTTTTT
TATTGTTCTGTTGTACAGTTGCGTATTGTCATTACCCGTTCTATTATGGT
CTTGAATGGTTCCTGGACTTCACCTTCTACCACTTTGTTCCTGATATTCT
CTCACCCTGCGTCCCTCCGCGATAGGAGTTCTCTCTCTCTCATTCTACCA
CTCTTCAAGATGAAACTAACAATAACAGCTCACATGCACGCCGTCGCTCG
ATTCCACCTGCTCGCCAGCCGACCCAAAGGCTCCTTCGTAACTGGCAGCA
GCGCCAACTCATGGAATTGCAGCGCGACCCCAACATCCTTCCAGAAGCTC
TACCACAATCTGTGGCACAACGGGATCGCATACAGCATTGTCGTTTTGCT
TGCCACTATCGCATCCATCGTCTACTCGATCTACACGGCTATCACAACCA
CTGATGATAGGCTGTTATCCCGCTTGCTCACCACGATTGCTTGGCCGCCG
ATGCTTCACATCTGCTACCTCTCCATCGTCAGTTACTGGGCACCAGTCTC
ATATCTGCTGAACCCGCCGCGGTATCCGGAGCGGAAGGCTGGATTGGCTT
TGTCGGAGACGGGCGTGGTGCTTCCGAGTCCGGAGGTCCAGCAAGCAGCT
ATGGTGCTTGGGAAAGCACCGGTTGGGTTCTATCGTCAGTGCGTGGTGGT
CGTGTTGGTTCTGGGGGGGTTATTGTTGGGTGGATTGACGTTGTGAATGC
TGTCTAAACTGCTCTACGACATTCAGGAGCTCCCGCCTGACCATCGCGTT
GTCGCGGGACAGCGGCACCGACGCTTGCTCTATTACGTAGCCCATCTGGC
ATCATGGACCTCCAACCTTTATCTCGTCCTTCGCCTAGCTCTGTGTTTCT
CTGCTGTGCAACAAAATTGGCGAGCCTGGCTAACTCTGTTGGTCGAGACC
GTTCTCGCCATCATTTGGCGTCATGATCAGCTTCTCACCATGTTAGGTGG
TTCGGCATCAGAGAGCCAACCACGCAAAAGACTGCGATTACACGGCACCG
ACGATCTACCGCAGGTGGACATTTTGGTGCCCTGCTGCGGAGAGCCTGTC
GACGTCATTTTGGACACCGTGCGTGCTGCCTGTACAATGGACTATCCAGT
TTCCAGCTTCCGGGTCCGTGTATTGGACGATGGTGCTTCCACAGAGCTCG
AGTCCGCCGTTGCAGCACTGCGCACTGAATGGCCTCACCTCTTCTACCAC
ACGCGCGGAAGGCAATCCGGTAAGGTCTTCGCCAAGGCTGGTAACATGAA
TTACGCCCTGTTCACCCTGCAAGAAAAGGCTCCACCTGAGTTTTGTGCCA
TCTTCGATGCAGACTCCATCCCCATGCCTCACTTTCTGAGGGCGACGTTG
CCCCATCTCCTTCAGACCCCGGAAGCCGTGCTCCTCACCACCCGGCAGTA
CTTTTACAACCTCCCATCAGGTGACCCCCTTTCCCAGTCACGCCTCCACT
TCTACACCTGTGAAAATGCAGAGCTCGATCGTCGAGGTCTTGCTCAGGAT
GCAGGCTCCGGGGCCCTCTTCCGGAGACAAGCCATCATCGATGCAGGTGG
ATATCCGACGTACAGCTTCTCCGAGGATTGGCAGCTGTCGCTTGTTCTGA
AGGGGCTAGGCCACCGCACCATCCAAGTCCAGGAGCCGTTACAATTCGGA
TTGGTTCCGACGTCCTTGGATGGACACATTGCACAGCGCAACCGGTGGCA
CATTGGCCACTCTCAACAGCTTCGGGTGTTGATGCCGCCCACAAACAAGA
CACTTCCCCGCTCGCTGCAGTGGAGTATTGCACAGAATGGCGTCTTCATC
ATGGCTGGAGGCCTTGGCTGTTTGATTTCATTTGCAATGGTTCCATTGCT
TCTGGCATCGGGTCAGCTGGTCCCAGACATTTCGCCATTGCTGGCCAAAG
CACAGTTTCTTCTGGCTGTTCTCCATATCGCCTTGACATGGGCGTATGGA
CTTTTGCAAAGCGCGCACACGGGATTCGAAAGCTTTCCGTTTTCTCGTTT
TGAAAATATCTGGCTGGCAGGAGGTAAGATACATACCTTTGTTTTTTATT
GTTCTGTTGTACAGTTGCGTATTGTCATTACCCGTTCTATTATGGTCTTG
AATGGTTCCTGGACTTCACCTTCTACCACTTTGTTCCTGATATTCTCTCA
CCCTGCGTCCCTCCGCGATAGGAGTTCTCTCTCTCTCATTCTACCACTCT
TCAAGATGAAACTAACAATAACAGCTCACATGCACGCCGTCGCTCGATTC
CACCTGCTCGCCAGCCGACCCAAAGGCTCCTTCGTAACTGGCAGCAGCGC
CAACTCATGGAATTGCAGCGCGACCCCAACATCCTTCCAGAAGCTCTACC
ACAATCTGTGGCACAACGGGATCGCATACAGCATTGTCGTTTTGCTTGCC
ACTATCGCATCCATCGTCTACTCGATCTACACGGCTATCACAACCACTGA
TGATAGGCTGTTATCCCGCTTGCTCACCACGATTGCTTGGCCGCCGATGC
TTCACATCTGCTACCTCTCCATCGTCAGTTACTGGGCACCAGTCTCATAT
CTGCTGAACCCGCCGCGGTATCCGGAGCGGAAGGCTGGATTGGCTTTGTC
GGAGACGGGCGTGGTGCTTCCGAGTCCGGAGGTCCAGCAAGCAGCTATGG
TGCTTGGGAAAGCACCGGTTGGGTTCTATCGTCAGTGCGTGGTGGTCGTG
TTGGTTCTGGGGGGGTTATTGTTGGGTGGATTGACGTTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008214-T1.utr5p1 | KJC3_008214-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008214-T1.utr3p1 | KJC3_008214-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.10 |
| Note | CAZy:GT2_Glyco_tranf_2_3 |
| DBxref | InterPro:IPR029044 |
| DBxref | PFAM:PF13632 |
| DBxref | PFAM:PF13641 |
| DBxref | PFAM:PF00535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1289171..1292062 + |
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