You are here

Home

KJC3_008215-T1, KJC3_008215-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008215-T1
Unique NameKJC3_008215-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1292400..1294077-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008215-T1 ID=KJC3_008215-T1|Name=KJC3_008215-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1678bp|location=Sequence derived from alignment at ch6:1292400..1294077- (Aspergillus niger KJC3)
ATGTCGCCGGATCTACCTTGCATTGTCTTTGCGAGGTCCTTTTTCCATAG
GCACGATAGAGATGATAACGCAGAGCGCCATGCTAGACATGAGACACCTA
AGCAGATCGACGAGCATGCTCACCGGCGAAAGCACTCGTCAGACTCAGAA
AAGACACTTACAGTCGAGGACTGGGCAACAAGTCGCGAGAACCCACACAA
CTGGCCGCTAGCAAAGACAATCATCACATCCCTCATAGTATACGTCTACA
CGTAAGTCCACCCAATCACACCTCGCAAACAAAAGTACCAATCTAAAAGT
ACAGTTTCGTGGTGTATGCTGGGTCATCCATGTTCATTACGGCAGTCCCG
TTGGTCATGCAGGAGCTGCACATCTCCGAGCAACGCGCCATGTTAGGGCT
GTCCATCTACGTGCTTGGGTGTACGACTGACCCCATTCAATGCTATCCCA
TGACCTTATACTAACCTCAACAGACGGCGTCGGACCCCTCCTCTGGGGCC
CGCTCAGCGAGATCCCTCGCATCGGACGATCAGTCGTCTACGTCGGAACA
TTCATAGCATTCATCCTCGTCACGATCGGAGCCGCCGAAGTATCGAACTA
CAGCGCATTCGTCTTCCTCCGCTTCTTGCAGGGGCTCTTCGGCAGCCCGT
GCCTCGCCAACGGCGGCGCCTCCATGCATGACCTTTACCCCGAATCCCAG
TTCCCCTACGCCCTCGCTCTATGGGTAGCTGCAGCGTACTGCGGCCCGGC
TCTCGGGCCCCTGCTCACCAACAGCCTGGTCAACAACATCTCCTGGAAAT
GGACCATGTGGCTCCTCGCCTGTATGTCCGGCCCGGTATGCATCCTGCTG
TTTCTCCTCCCTGAAACTTACGCCCCGACCATACGATACCGCAGCAGTGC
ATTCAATACCAACAGCAGCAACGACAATAACAGCGATAGTACAAGTGACA
ACCCCCTTGCCAAACTAAAATTCTACCTCGTCAAACCAGTCCAAATCACC
CTCCAAGATCCTGCCATCCTCTTCGCCAACATCTACACCTCCTTTATCTA
CGGCACGTATTATACCTTCTTCGACGCCTTTCCCATCGGGTACCCACCCG
TCTATAATGTATCCTCTACCACCCTCAGCCTATTCTACCTGTCAGTCCTA
GTAGGGTGCTTCCTCGCAGTATTCGCCTACTTCACTTATCTCTCCCTCCC
TAACTACCTCCGCAAACACCATCTCCATCACAACACCCCCAAATCCACCT
CAATCCCTCACCCAACCCACGAACGACACCTCATCCCCGCCATCCCAGCT
ACCTTCCTCGTCCCCATCTCCCTATTCCTCTACGGCTGGACCCTCCGCCC
CTCCATCCACTGGATCGTCAGCATCATCGGCGTGACATTGTACGCCAGCG
CGGTGTTTATCATTTTACAATGTCTCTCCATGTATATACCTAGTATATAT
CCCGAGTACGCGGCGAGTCTGTTCGCCGCGAATGACTTCTGTCGGAGTAC
GTTGGCTGCTGGCGCGGTGCATTTTGGGATCCCCCTATATCAGAATCTGG
GGATGGCGAGGGGGTCGAGTGTCCTGGGAGGTGTCAGTGTGTTGGGGGTT
TTGGGACTCTTGGGAATTTATTGGTTCGGGGAGAGACTGAGGAAGCAGTC
GAGGTTTGTGGAGAGGTTGGTTGAGTAG
back to top

Coding sequence (CDS) from alignment at ch6:1292400..1294077-

>KJC3_008215-T1 ID=KJC3_008215-T1|Name=KJC3_008215-T1|organism=Aspergillus niger KJC3|type=CDS|length=4716bp|location=Sequence derived from alignment at ch6:1292400..1294077- (Aspergillus niger KJC3)
ACGGCGTCGGACCCCTCCTCTGGGGCCCGCTCAGCGAGATCCCTCGCATC
GGACGATCAGTCGTCTACGTCGGAACATTCATAGCATTCATCCTCGTCAC
GATCGGAGCCGCCGAAGTATCGAACTACAGCGCATTCGTCTTCCTCCGCT
TCTTGCAGGGGCTCTTCGGCAGCCCGTGCCTCGCCAACGGCGGCGCCTCC
ATGCATGACCTTTACCCCGAATCCCAGTTCCCCTACGCCCTCGCTCTATG
GGTAGCTGCAGCGTACTGCGGCCCGGCTCTCGGGCCCCTGCTCACCAACA
GCCTGGTCAACAACATCTCCTGGAAATGGACCATGTGGCTCCTCGCCTGT
ATGTCCGGCCCGGTATGCATCCTGCTGTTTCTCCTCCCTGAAACTTACGC
CCCGACCATACGATACCGCAGCAGTGCATTCAATACCAACAGCAGCAACG
ACAATAACAGCGATAGTACAAGTGACAACCCCCTTGCCAAACTAAAATTC
TACCTCGTCAAACCAGTCCAAATCACCCTCCAAGATCCTGCCATCCTCTT
CGCCAACATCTACACCTCCTTTATCTACGGCACGTATTATACCTTCTTCG
ACGCCTTTCCCATCGGGTACCCACCCGTCTATAATGTATCCTCTACCACC
CTCAGCCTATTCTACCTGTCAGTCCTAGTAGGGTGCTTCCTCGCAGTATT
CGCCTACTTCACTTATCTCTCCCTCCCTAACTACCTCCGCAAACACCATC
TCCATCACAACACCCCCAAATCCACCTCAATCCCTCACCCAACCCACGAA
CGACACCTCATCCCCGCCATCCCAGCTACCTTCCTCGTCCCCATCTCCCT
ATTCCTCTACGGCTGGACCCTCCGCCCCTCCATCCACTGGATCGTCAGCA
TCATCGGCGTGACATTGTACGCCAGCGCGGTGTTTATCATTTTACAATGT
CTCTCCATGTATATACCTAGTATATATCCCGAGTACGCGGCGAGTCTGTT
CGCCGCGAATGACTTCTGTCGGAGTACGTTGGCTGCTGGCGCGGTGCATT
TTGGGATCCCCCTATATCAGAATCTGGGGATGGCGAGGGGGTCGAGTGTC
CTGGGAGGTGTCAGTGTGTTGGGGGTTTTGGGACTCTTGGGAATTTATTG
GTTCGGGGAGAGACTGAGGAAGCAGTCGAGGTTTGTGGAGAGGTTGGTTG
AGTAGTTTCGTGGTGTATGCTGGGTCATCCATGTTCATTACGGCAGTCCC
GTTGGTCATGCAGGAGCTGCACATCTCCGAGCAACGCGCCATGTTAGGGC
TGTCCATCTACGTGCTTGGGTATGTCGCCGGATCTACCTTGCATTGTCTT
TGCGAGGTCCTTTTTCCATAGGCACGATAGAGATGATAACGCAGAGCGCC
ATGCTAGACATGAGACACCTAAGCAGATCGACGAGCATGCTCACCGGCGA
AAGCACTCGTCAGACTCAGAAAAGACACTTACAGTCGAGGACTGGGCAAC
AAGTCGCGAGAACCCACACAACTGGCCGCTAGCAAAGACAATCATCACAT
CCCTCATAGTATACGTCTACACACGGCGTCGGACCCCTCCTCTGGGGCCC
GCTCAGCGAGATCCCTCGCATCGGACGATCAGTCGTCTACGTCGGAACAT
TCATAGCATTCATCCTCGTCACGATCGGAGCCGCCGAAGTATCGAACTAC
AGCGCATTCGTCTTCCTCCGCTTCTTGCAGGGGCTCTTCGGCAGCCCGTG
CCTCGCCAACGGCGGCGCCTCCATGCATGACCTTTACCCCGAATCCCAGT
TCCCCTACGCCCTCGCTCTATGGGTAGCTGCAGCGTACTGCGGCCCGGCT
CTCGGGCCCCTGCTCACCAACAGCCTGGTCAACAACATCTCCTGGAAATG
GACCATGTGGCTCCTCGCCTGTATGTCCGGCCCGGTATGCATCCTGCTGT
TTCTCCTCCCTGAAACTTACGCCCCGACCATACGATACCGCAGCAGTGCA
TTCAATACCAACAGCAGCAACGACAATAACAGCGATAGTACAAGTGACAA
CCCCCTTGCCAAACTAAAATTCTACCTCGTCAAACCAGTCCAAATCACCC
TCCAAGATCCTGCCATCCTCTTCGCCAACATCTACACCTCCTTTATCTAC
GGCACGTATTATACCTTCTTCGACGCCTTTCCCATCGGGTACCCACCCGT
CTATAATGTATCCTCTACCACCCTCAGCCTATTCTACCTGTCAGTCCTAG
TAGGGTGCTTCCTCGCAGTATTCGCCTACTTCACTTATCTCTCCCTCCCT
AACTACCTCCGCAAACACCATCTCCATCACAACACCCCCAAATCCACCTC
AATCCCTCACCCAACCCACGAACGACACCTCATCCCCGCCATCCCAGCTA
CCTTCCTCGTCCCCATCTCCCTATTCCTCTACGGCTGGACCCTCCGCCCC
TCCATCCACTGGATCGTCAGCATCATCGGCGTGACATTGTACGCCAGCGC
GGTGTTTATCATTTTACAATGTCTCTCCATGTATATACCTAGTATATATC
CCGAGTACGCGGCGAGTCTGTTCGCCGCGAATGACTTCTGTCGGAGTACG
TTGGCTGCTGGCGCGGTGCATTTTGGGATCCCCCTATATCAGAATCTGGG
GATGGCGAGGGGGTCGAGTGTCCTGGGAGGTGTCAGTGTGTTGGGGGTTT
TGGGACTCTTGGGAATTTATTGGTTCGGGGAGAGACTGAGGAAGCAGTCG
AGGTTTGTGGAGAGGTTGGTTGAGTAGTTTCGTGGTGTATGCTGGGTCAT
CCATGTTCATTACGGCAGTCCCGTTGGTCATGCAGGAGCTGCACATCTCC
GAGCAACGCGCCATGTTAGGGCTGTCCATCTACGTGCTTGGGTATGTCGC
CGGATCTACCTTGCATTGTCTTTGCGAGGTCCTTTTTCCATAGGCACGAT
AGAGATGATAACGCAGAGCGCCATGCTAGACATGAGACACCTAAGCAGAT
CGACGAGCATGCTCACCGGCGAAAGCACTCGTCAGACTCAGAAAAGACAC
TTACAGTCGAGGACTGGGCAACAAGTCGCGAGAACCCACACAACTGGCCG
CTAGCAAAGACAATCATCACATCCCTCATAGTATACGTCTACACACGGCG
TCGGACCCCTCCTCTGGGGCCCGCTCAGCGAGATCCCTCGCATCGGACGA
TCAGTCGTCTACGTCGGAACATTCATAGCATTCATCCTCGTCACGATCGG
AGCCGCCGAAGTATCGAACTACAGCGCATTCGTCTTCCTCCGCTTCTTGC
AGGGGCTCTTCGGCAGCCCGTGCCTCGCCAACGGCGGCGCCTCCATGCAT
GACCTTTACCCCGAATCCCAGTTCCCCTACGCCCTCGCTCTATGGGTAGC
TGCAGCGTACTGCGGCCCGGCTCTCGGGCCCCTGCTCACCAACAGCCTGG
TCAACAACATCTCCTGGAAATGGACCATGTGGCTCCTCGCCTGTATGTCC
GGCCCGGTATGCATCCTGCTGTTTCTCCTCCCTGAAACTTACGCCCCGAC
CATACGATACCGCAGCAGTGCATTCAATACCAACAGCAGCAACGACAATA
ACAGCGATAGTACAAGTGACAACCCCCTTGCCAAACTAAAATTCTACCTC
GTCAAACCAGTCCAAATCACCCTCCAAGATCCTGCCATCCTCTTCGCCAA
CATCTACACCTCCTTTATCTACGGCACGTATTATACCTTCTTCGACGCCT
TTCCCATCGGGTACCCACCCGTCTATAATGTATCCTCTACCACCCTCAGC
CTATTCTACCTGTCAGTCCTAGTAGGGTGCTTCCTCGCAGTATTCGCCTA
CTTCACTTATCTCTCCCTCCCTAACTACCTCCGCAAACACCATCTCCATC
ACAACACCCCCAAATCCACCTCAATCCCTCACCCAACCCACGAACGACAC
CTCATCCCCGCCATCCCAGCTACCTTCCTCGTCCCCATCTCCCTATTCCT
CTACGGCTGGACCCTCCGCCCCTCCATCCACTGGATCGTCAGCATCATCG
GCGTGACATTGTACGCCAGCGCGGTGTTTATCATTTTACAATGTCTCTCC
ATGTATATACCTAGTATATATCCCGAGTACGCGGCGAGTCTGTTCGCCGC
GAATGACTTCTGTCGGAGTACGTTGGCTGCTGGCGCGGTGCATTTTGGGA
TCCCCCTATATCAGAATCTGGGGATGGCGAGGGGGTCGAGTGTCCTGGGA
GGTGTCAGTGTGTTGGGGGTTTTGGGACTCTTGGGAATTTATTGGTTCGG
GGAGAGACTGAGGAAGCAGTCGAGGTTTGTGGAGAGGTTGGTTGAGTAGT
TTCGTGGTGTATGCTGGGTCATCCATGTTCATTACGGCAGTCCCGTTGGT
CATGCAGGAGCTGCACATCTCCGAGCAACGCGCCATGTTAGGGCTGTCCA
TCTACGTGCTTGGGTATGTCGCCGGATCTACCTTGCATTGTCTTTGCGAG
GTCCTTTTTCCATAGGCACGATAGAGATGATAACGCAGAGCGCCATGCTA
GACATGAGACACCTAAGCAGATCGACGAGCATGCTCACCGGCGAAAGCAC
TCGTCAGACTCAGAAAAGACACTTACAGTCGAGGACTGGGCAACAAGTCG
CGAGAACCCACACAACTGGCCGCTAGCAAAGACAATCATCACATCCCTCA
TAGTATACGTCTACAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008215KJC3_008215Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008215-T1KJC3_008215-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008215-T1.cdsKJC3_008215-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008215-T1.exon3KJC3_008215-T1.exon3Aspergillus niger KJC3exon
KJC3_008215-T1.exon2KJC3_008215-T1.exon2Aspergillus niger KJC3exon
KJC3_008215-T1.exon1KJC3_008215-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_6.10
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1292400..1294077 -
Powered by Drupal