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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1303419..1304881+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008219-T1 ID=KJC3_008219-T1|Name=KJC3_008219-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1463bp|location=Sequence derived from alignment at ch6:1303419..1304881+ (Aspergillus niger KJC3)
ATCAGTAGTTCCCTTGCGCACCCTACAAGTGACCGTAAATGTTGGCATTC
TTATTCAGACTACGACTTCCTCATTCAACTGTGTGTCACGTCTCGGATGT
CTTGTGCTACACGCAACAATGGCTGCGTTGAAAGACGGAAATGCCAGCGA
CAACAAGGGTCCGATGATCCTATCAATGCTGTGGGCACTGACAGGCCTCA
CAACCGTTCTTGTCATAGCACGCATGTACATCAGAACAAGTCTCTTGCAC
AACCTCGGATCGGACGACTGGTTGATCACAGCGTCTTTGGTATGTATGTG
CCATGCGAGGGATACAACCGCTAACTCCAGCAGGTAATGGGAGTTGTCTA
CTGTGCTATCACGACGATAAATGTTGATATGGGATTTGGGAAGCATGCAT
GGCTATTGAGCGAAAGAACTGTGGAACATGCTACATACCTCAACTGCTTG
AGCTTCCTTTTCGGGATCATCTCTTTCACGATCCCCAAGCTGGCGGTGAC
TGCGATGCTAAATCGGATTCTCAACCCAAGTATGGTGCAGCGGATATGTT
TGTGGACGTTGACTGGATTCGCTGCGGTTGTGTCGGGAATATGCATTATT
GTGCTCTTCACGATGTGCGACCCACCGGAGGCATTGTGGAAGACACATCT
GGTGACAGAGGGAAAGGCAACCTGCAAAGACGTCTGGATTTTGATTGACT
ATGCTATATTTACTGGAGGTTGGTTCAAGCGACCATTCTTTGTTGCAACA
GCTAACAGCCCAGCCTTATCCGCCTTTGTCGATCTAACGCTGGCCGTATA
TCCGAGCACGGTGCTGATGAAACTTCATATGTCGTTGCGCAAACGGCTCG
CTTTGTGCGCAGCCTTAGGTTTGGGCTCTGTGTATGTATATCATTGTTCT
TCAGTGGGCCACAACTGACCATATAGTGCTTCTGCAATGGCCATCGTCAA
GTGCACGCAGTTGAAGGGATTAGCTGACAAAACCGACTACACCTGTAAGC
ATATCCACCACTAGCCAAAGGAAGATTCTAACATCAAAAGACGGCACTGC
CGAGCTAGTTATGTGGACCAAGTAAGACCAGTCCTACCAAAGAAGATATG
GCATCTAACAGATGTAGCATCGAATCTAACGTTGTCATTATCGCTTCCTG
CATTCCGACCCTCCAACCCGTCCTCGAATTGATTCTCGGCAAACGCACCA
CAAGCTCCTACAACAGTCGCAACCGCTACAAAGGGAGTTCGCAATTGCCA
GATTCCTCCAACGACCATAGCAAGCTGTCCAAGCCACGAAAGACCGACTA
CGAGATCACAACGGTGGGAAGTCAAGAGAGCATTCTCCGCGAGGAAGCCA
ACGGGCGCATCGAAAGTCATCCGATGGGAGCAATCAGACGGACGGATAAT
GTGACGGTGGAATATGAGAGTCGGTCGAGAGAGGATCCGGCGGAGCTGCG
GGTGTCATGGTAG back to topCoding sequence (CDS) from alignment at ch6:1303419..1304881+ >KJC3_008219-T1 ID=KJC3_008219-T1|Name=KJC3_008219-T1|organism=Aspergillus niger KJC3|type=CDS|length=6714bp|location=Sequence derived from alignment at ch6:1303419..1304881+ (Aspergillus niger KJC3)
ATGGCTGCGTTGAAAGACGGAAATGCCAGCGACAACAAGGGTCCGATGAT
CCTATCAATGCTGTGGGCACTGACAGGCCTCACAACCGTTCTTGTCATAG
CACGCATGTACATCAGAACAAGTCTCTTGCACAACCTCGGATCGGACGAC
TGGTTGATCACAGCGTCTTTGGTAATGGGAGTTGTCTACTGTGCTATCAC
GACGATAAATGTTGATATGGGATTTGGGAAGCATGCATGGCTATTGAGCG
AAAGAACTGTGGAACATGCTACATACCTCAACTGCTTGAGCTTCCTTTTC
GGGATCATCTCTTTCACGATCCCCAAGCTGGCGGTGACTGCGATGCTAAA
TCGGATTCTCAACCCAAGTATGGTGCAGCGGATATGTTTGTGGACGTTGA
CTGGATTCGCTGCGGTTGTGTCGGGAATATGCATTATTGTGCTCTTCACG
ATGTGCGACCCACCGGAGGCATTGTGGAAGACACATCTGGTGACAGAGGG
AAAGGCAACCTGCAAAGACGTCTGGATTTTGATTGACTATGCTATATTTA
CTGGAGCCTTATCCGCCTTTGTCGATCTAACGCTGGCCGTATATCCGAGC
ACGGTGCTGATGAAACTTCATATGTCGTTGCGCAAACGGCTCGCTTTGTG
CGCAGCCTTAGGTTTGGGCTCTGTTGCTTCTGCAATGGCCATCGTCAAGT
GCACGCAGTTGAAGGGATTAGCTGACAAAACCGACTACACCTACGGCACT
GCCGAGCTAGTTATGTGGACCAACATCGAATCTAACGTTGTCATTATCGC
TTCCTGCATTCCGACCCTCCAACCCGTCCTCGAATTGATTCTCGGCAAAC
GCACCACAAGCTCCTACAACAGTCGCAACCGCTACAAAGGGAGTTCGCAA
TTGCCAGATTCCTCCAACGACCATAGCAAGCTGTCCAAGCCACGAAAGAC
CGACTACGAGATCACAACGGTGGGAAGTCAAGAGAGCATTCTCCGCGAGG
AAGCCAACGGGCGCATCGAAAGTCATCCGATGGGAGCAATCAGACGGACG
GATAATGTGACGGTGGAATATGAGAGTCGGTCGAGAGAGGATCCGGCGGA
GCTGCGGGTGTCATGGTAGATGGCTGCGTTGAAAGACGGAAATGCCAGCG
ACAACAAGGGTCCGATGATCCTATCAATGCTGTGGGCACTGACAGGCCTC
ACAACCGTTCTTGTCATAGCACGCATGTACATCAGAACAAGTCTCTTGCA
CAACCTCGGATCGGACGACTGGTTGATCACAGCGTCTTTGGTAATGGGAG
TTGTCTACTGTGCTATCACGACGATAAATGTTGATATGGGATTTGGGAAG
CATGCATGGCTATTGAGCGAAAGAACTGTGGAACATGCTACATACCTCAA
CTGCTTGAGCTTCCTTTTCGGGATCATCTCTTTCACGATCCCCAAGCTGG
CGGTGACTGCGATGCTAAATCGGATTCTCAACCCAAGTATGGTGCAGCGG
ATATGTTTGTGGACGTTGACTGGATTCGCTGCGGTTGTGTCGGGAATATG
CATTATTGTGCTCTTCACGATGTGCGACCCACCGGAGGCATTGTGGAAGA
CACATCTGGTGACAGAGGGAAAGGCAACCTGCAAAGACGTCTGGATTTTG
ATTGACTATGCTATATTTACTGGAGCCTTATCCGCCTTTGTCGATCTAAC
GCTGGCCGTATATCCGAGCACGGTGCTGATGAAACTTCATATGTCGTTGC
GCAAACGGCTCGCTTTGTGCGCAGCCTTAGGTTTGGGCTCTGTTGCTTCT
GCAATGGCCATCGTCAAGTGCACGCAGTTGAAGGGATTAGCTGACAAAAC
CGACTACACCTACGGCACTGCCGAGCTAGTTATGTGGACCAACATCGAAT
CTAACGTTGTCATTATCGCTTCCTGCATTCCGACCCTCCAACCCGTCCTC
GAATTGATTCTCGGCAAACGCACCACAAGCTCCTACAACAGTCGCAACCG
CTACAAAGGGAGTTCGCAATTGCCAGATTCCTCCAACGACCATAGCAAGC
TGTCCAAGCCACGAAAGACCGACTACGAGATCACAACGGTGGGAAGTCAA
GAGAGCATTCTCCGCGAGGAAGCCAACGGGCGCATCGAAAGTCATCCGAT
GGGAGCAATCAGACGGACGGATAATGTGACGGTGGAATATGAGAGTCGGT
CGAGAGAGGATCCGGCGGAGCTGCGGGTGTCATGGTAGATGGCTGCGTTG
AAAGACGGAAATGCCAGCGACAACAAGGGTCCGATGATCCTATCAATGCT
GTGGGCACTGACAGGCCTCACAACCGTTCTTGTCATAGCACGCATGTACA
TCAGAACAAGTCTCTTGCACAACCTCGGATCGGACGACTGGTTGATCACA
GCGTCTTTGGTAATGGGAGTTGTCTACTGTGCTATCACGACGATAAATGT
TGATATGGGATTTGGGAAGCATGCATGGCTATTGAGCGAAAGAACTGTGG
AACATGCTACATACCTCAACTGCTTGAGCTTCCTTTTCGGGATCATCTCT
TTCACGATCCCCAAGCTGGCGGTGACTGCGATGCTAAATCGGATTCTCAA
CCCAAGTATGGTGCAGCGGATATGTTTGTGGACGTTGACTGGATTCGCTG
CGGTTGTGTCGGGAATATGCATTATTGTGCTCTTCACGATGTGCGACCCA
CCGGAGGCATTGTGGAAGACACATCTGGTGACAGAGGGAAAGGCAACCTG
CAAAGACGTCTGGATTTTGATTGACTATGCTATATTTACTGGAGCCTTAT
CCGCCTTTGTCGATCTAACGCTGGCCGTATATCCGAGCACGGTGCTGATG
AAACTTCATATGTCGTTGCGCAAACGGCTCGCTTTGTGCGCAGCCTTAGG
TTTGGGCTCTGTTGCTTCTGCAATGGCCATCGTCAAGTGCACGCAGTTGA
AGGGATTAGCTGACAAAACCGACTACACCTACGGCACTGCCGAGCTAGTT
ATGTGGACCAACATCGAATCTAACGTTGTCATTATCGCTTCCTGCATTCC
GACCCTCCAACCCGTCCTCGAATTGATTCTCGGCAAACGCACCACAAGCT
CCTACAACAGTCGCAACCGCTACAAAGGGAGTTCGCAATTGCCAGATTCC
TCCAACGACCATAGCAAGCTGTCCAAGCCACGAAAGACCGACTACGAGAT
CACAACGGTGGGAAGTCAAGAGAGCATTCTCCGCGAGGAAGCCAACGGGC
GCATCGAAAGTCATCCGATGGGAGCAATCAGACGGACGGATAATGTGACG
GTGGAATATGAGAGTCGGTCGAGAGAGGATCCGGCGGAGCTGCGGGTGTC
ATGGTAGATGGCTGCGTTGAAAGACGGAAATGCCAGCGACAACAAGGGTC
CGATGATCCTATCAATGCTGTGGGCACTGACAGGCCTCACAACCGTTCTT
GTCATAGCACGCATGTACATCAGAACAAGTCTCTTGCACAACCTCGGATC
GGACGACTGGTTGATCACAGCGTCTTTGGTAATGGGAGTTGTCTACTGTG
CTATCACGACGATAAATGTTGATATGGGATTTGGGAAGCATGCATGGCTA
TTGAGCGAAAGAACTGTGGAACATGCTACATACCTCAACTGCTTGAGCTT
CCTTTTCGGGATCATCTCTTTCACGATCCCCAAGCTGGCGGTGACTGCGA
TGCTAAATCGGATTCTCAACCCAAGTATGGTGCAGCGGATATGTTTGTGG
ACGTTGACTGGATTCGCTGCGGTTGTGTCGGGAATATGCATTATTGTGCT
CTTCACGATGTGCGACCCACCGGAGGCATTGTGGAAGACACATCTGGTGA
CAGAGGGAAAGGCAACCTGCAAAGACGTCTGGATTTTGATTGACTATGCT
ATATTTACTGGAGCCTTATCCGCCTTTGTCGATCTAACGCTGGCCGTATA
TCCGAGCACGGTGCTGATGAAACTTCATATGTCGTTGCGCAAACGGCTCG
CTTTGTGCGCAGCCTTAGGTTTGGGCTCTGTTGCTTCTGCAATGGCCATC
GTCAAGTGCACGCAGTTGAAGGGATTAGCTGACAAAACCGACTACACCTA
CGGCACTGCCGAGCTAGTTATGTGGACCAACATCGAATCTAACGTTGTCA
TTATCGCTTCCTGCATTCCGACCCTCCAACCCGTCCTCGAATTGATTCTC
GGCAAACGCACCACAAGCTCCTACAACAGTCGCAACCGCTACAAAGGGAG
TTCGCAATTGCCAGATTCCTCCAACGACCATAGCAAGCTGTCCAAGCCAC
GAAAGACCGACTACGAGATCACAACGGTGGGAAGTCAAGAGAGCATTCTC
CGCGAGGAAGCCAACGGGCGCATCGAAAGTCATCCGATGGGAGCAATCAG
ACGGACGGATAATGTGACGGTGGAATATGAGAGTCGGTCGAGAGAGGATC
CGGCGGAGCTGCGGGTGTCATGGTAGATGGCTGCGTTGAAAGACGGAAAT
GCCAGCGACAACAAGGGTCCGATGATCCTATCAATGCTGTGGGCACTGAC
AGGCCTCACAACCGTTCTTGTCATAGCACGCATGTACATCAGAACAAGTC
TCTTGCACAACCTCGGATCGGACGACTGGTTGATCACAGCGTCTTTGGTA
ATGGGAGTTGTCTACTGTGCTATCACGACGATAAATGTTGATATGGGATT
TGGGAAGCATGCATGGCTATTGAGCGAAAGAACTGTGGAACATGCTACAT
ACCTCAACTGCTTGAGCTTCCTTTTCGGGATCATCTCTTTCACGATCCCC
AAGCTGGCGGTGACTGCGATGCTAAATCGGATTCTCAACCCAAGTATGGT
GCAGCGGATATGTTTGTGGACGTTGACTGGATTCGCTGCGGTTGTGTCGG
GAATATGCATTATTGTGCTCTTCACGATGTGCGACCCACCGGAGGCATTG
TGGAAGACACATCTGGTGACAGAGGGAAAGGCAACCTGCAAAGACGTCTG
GATTTTGATTGACTATGCTATATTTACTGGAGCCTTATCCGCCTTTGTCG
ATCTAACGCTGGCCGTATATCCGAGCACGGTGCTGATGAAACTTCATATG
TCGTTGCGCAAACGGCTCGCTTTGTGCGCAGCCTTAGGTTTGGGCTCTGT
TGCTTCTGCAATGGCCATCGTCAAGTGCACGCAGTTGAAGGGATTAGCTG
ACAAAACCGACTACACCTACGGCACTGCCGAGCTAGTTATGTGGACCAAC
ATCGAATCTAACGTTGTCATTATCGCTTCCTGCATTCCGACCCTCCAACC
CGTCCTCGAATTGATTCTCGGCAAACGCACCACAAGCTCCTACAACAGTC
GCAACCGCTACAAAGGGAGTTCGCAATTGCCAGATTCCTCCAACGACCAT
AGCAAGCTGTCCAAGCCACGAAAGACCGACTACGAGATCACAACGGTGGG
AAGTCAAGAGAGCATTCTCCGCGAGGAAGCCAACGGGCGCATCGAAAGTC
ATCCGATGGGAGCAATCAGACGGACGGATAATGTGACGGTGGAATATGAG
AGTCGGTCGAGAGAGGATCCGGCGGAGCTGCGGGTGTCATGGTAGATGGC
TGCGTTGAAAGACGGAAATGCCAGCGACAACAAGGGTCCGATGATCCTAT
CAATGCTGTGGGCACTGACAGGCCTCACAACCGTTCTTGTCATAGCACGC
ATGTACATCAGAACAAGTCTCTTGCACAACCTCGGATCGGACGACTGGTT
GATCACAGCGTCTTTGGTAATGGGAGTTGTCTACTGTGCTATCACGACGA
TAAATGTTGATATGGGATTTGGGAAGCATGCATGGCTATTGAGCGAAAGA
ACTGTGGAACATGCTACATACCTCAACTGCTTGAGCTTCCTTTTCGGGAT
CATCTCTTTCACGATCCCCAAGCTGGCGGTGACTGCGATGCTAAATCGGA
TTCTCAACCCAAGTATGGTGCAGCGGATATGTTTGTGGACGTTGACTGGA
TTCGCTGCGGTTGTGTCGGGAATATGCATTATTGTGCTCTTCACGATGTG
CGACCCACCGGAGGCATTGTGGAAGACACATCTGGTGACAGAGGGAAAGG
CAACCTGCAAAGACGTCTGGATTTTGATTGACTATGCTATATTTACTGGA
GCCTTATCCGCCTTTGTCGATCTAACGCTGGCCGTATATCCGAGCACGGT
GCTGATGAAACTTCATATGTCGTTGCGCAAACGGCTCGCTTTGTGCGCAG
CCTTAGGTTTGGGCTCTGTTGCTTCTGCAATGGCCATCGTCAAGTGCACG
CAGTTGAAGGGATTAGCTGACAAAACCGACTACACCTACGGCACTGCCGA
GCTAGTTATGTGGACCAACATCGAATCTAACGTTGTCATTATCGCTTCCT
GCATTCCGACCCTCCAACCCGTCCTCGAATTGATTCTCGGCAAACGCACC
ACAAGCTCCTACAACAGTCGCAACCGCTACAAAGGGAGTTCGCAATTGCC
AGATTCCTCCAACGACCATAGCAAGCTGTCCAAGCCACGAAAGACCGACT
ACGAGATCACAACGGTGGGAAGTCAAGAGAGCATTCTCCGCGAGGAAGCC
AACGGGCGCATCGAAAGTCATCCGATGGGAGCAATCAGACGGACGGATAA
TGTGACGGTGGAATATGAGAGTCGGTCGAGAGAGGATCCGGCGGAGCTGC
GGGTGTCATGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008219-T1.utr5p1 | KJC3_008219-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1303419..1304881 + |
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