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KJC3_008229-T1, KJC3_008229-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008229-T1
Unique NameKJC3_008229-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1325045..1326676-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008229-T1 ID=KJC3_008229-T1|Name=KJC3_008229-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1632bp|location=Sequence derived from alignment at ch6:1325045..1326676- (Aspergillus niger KJC3)
CTTCTACACTCCCCAACCGTATACAATGAACCCCTTCTCCTCTCCTCTCA
TAACTCCAGCCGAATACCATCACAATGCCACAACATACAACGCCACCGGA
TCTAGGCGAATCATCCCCTTAGCAGCCTACCGTCCCACGCTCCACTCGTC
CTTTGAATCCTTCCACCTTCCAGGCTCAAAGTACTCCGTGTCCCCGCTCC
CCATACACCCCACCACCCCATACTAATAGATTTATTACCAATTAGGTTCT
TCAATCTCGACCAAATTCGCGACACCGCCTCTCCCTACCCCTCTATGCTT
CCCTCACCTTCCCTCTTCGCCGCTGGAATGACTGCCCTCGGTATTCGCAA
GGATGATATTTTAGTTATCTACGATGCAGACGAGATAGGCACATACCATG
CCCCGCGGCTAGCGTTCATGTGTGAGCTCTTTGGACATAAGGATGTGCAT
ATCTTGAATAACCTGAGGCGGTATGTGAGGATGGGGCTGCCCGTAGGTTC
AGGATCTGAGGGGATAGAGGTTCCAGTGGTCGGGACTGGAAGAGAGCAAG
GTGATGAGTATGTTGTGGAAGAGGGGGATATTGATACCGGAAGGGTGATA
TCTTTCGAGGACGTGAAGAATTCCGTTCTCGGGAAGGATCAGGAAAAGGT
GAGGATTATCGATGCCAGAATACCGGGTCGGTTTCAAGGTGTGCAGCCAG
AAATGGATCCAAGTTTGAGGTCCGGACACATCCCTGGAGCGGTCAATGTG
CCATTGGCGAGGCTATTGGAGGATGGGGATGCAGTAATACTGGCTACCGA
AAAACTGAGGAGTGTTCTGATGGATGCGGGCGCGTTGGCGGAAGAAGATG
AGGGGATGCTGTACATTCTGACGTGCAATTCGGGGGTCACGGCTGCATCA
CTAGATCTGGCTCTGAGGTTGGTTGGGGCGAAGGGATCTAGAAGGGTGTA
TGATGGGAGCTGGATGGAGTGGACGCGGAGGGTAGGGGATGAACTGATCG
AAGTTTCGTAGTGACGGCTGTTTGGTGGTTATGGAAGCACGTACTTCTAG
CGTGCTCTCGCTTTACGGGGCTGCGTAATCAGATGCTTGATAAGATCGCC
GCACGAGGGTCCACTCCGAGGGATAAGATCACTGATTATGATTCCATCAT
ATCAGACCCGCAGGCGATCCGCTACGTCGCCGAATTCATGCTGCAAACAG
GCTTGCTCGGACAGTTCAGTCAGGTCGAACTCGGTCCTGACCCTGACCCC
GACCTAGGCCAGGAACACGTAGGCCTCAGGGCCATGGGGATAGGTGCTGA
AGACACTGGGTAGAAGAAACAAACACGCCCTGTTTGAGTCAGCAGGGAAG
GCACGCATGCCAAAAAGACCATACATGTTGGAAACAGGGGTTGGACGAAG
AACGGAGGGGATGGTGACTCGCAGGCAGCTGGCAGGTCAGCTGCGACACT
CGTTTGTATCTATTTTGTATGGCGTCGCTTTGCTTTGTTATATTTAATTG
TGTTGAGTTACGGCGACGACCTTCCTACGTCGTAACATGCGTTGTTTTAT
GTGTTTACTGCGAGTTTGAGAGATTTGACGGCGTTCGGGGCCATATTCCT
GCTTCAAACAGTGAAGCACCTGCATAGCTAGC
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Coding sequence (CDS) from alignment at ch6:1325045..1326676-

>KJC3_008229-T1 ID=KJC3_008229-T1|Name=KJC3_008229-T1|organism=Aspergillus niger KJC3|type=CDS|length=1842bp|location=Sequence derived from alignment at ch6:1325045..1326676- (Aspergillus niger KJC3)
GTTCTTCAATCTCGACCAAATTCGCGACACCGCCTCTCCCTACCCCTCTA
TGCTTCCCTCACCTTCCCTCTTCGCCGCTGGAATGACTGCCCTCGGTATT
CGCAAGGATGATATTTTAGTTATCTACGATGCAGACGAGATAGGCACATA
CCATGCCCCGCGGCTAGCGTTCATGTGTGAGCTCTTTGGACATAAGGATG
TGCATATCTTGAATAACCTGAGGCGGTATGTGAGGATGGGGCTGCCCGTA
GGTTCAGGATCTGAGGGGATAGAGGTTCCAGTGGTCGGGACTGGAAGAGA
GCAAGGTGATGAGTATGTTGTGGAAGAGGGGGATATTGATACCGGAAGGG
TGATATCTTTCGAGGACGTGAAGAATTCCGTTCTCGGGAAGGATCAGGAA
AAGGTGAGGATTATCGATGCCAGAATACCGGGTCGGTTTCAAGGTGTGCA
GCCAGAAATGGATCCAAGTTTGAGGTCCGGACACATCCCTGGAGCGGTCA
ATGTGCCATTGGCGAGGCTATTGGAGGATGGGGATGCAGTAATACTGGCT
ACCGAAAAACTGAGGAGTGTTCTGATGGATGCGGGCGCGTTGGCGGAAGA
AGATGAGGGGATGCTGTACATTCTGACGTGCAATTCGGGGGTCACGGCTG
CATCACTAGATCTGGCTCTGAGGTTGGTTGGGGCGAAGGGATCTAGAAGG
GTGTATGATGGGAGCTGGATGGAGTGGACGCGGAGGGTAGGGGATGAACT
GATCGAAGTTTCGTAGATGAACCCCTTCTCCTCTCCTCTCATAACTCCAG
CCGAATACCATCACAATGCCACAACATACAACGCCACCGGATCTAGGCGA
ATCATCCCCTTAGCAGCCTACCGTCCCACGCTCCACTCGTCCTTTGAATC
CTTCCACCTTCCAGGCTCAAAGTTCTTCAATCTCGACCAAATTCGCGACA
CCGCCTCTCCCTACCCCTCTATGCTTCCCTCACCTTCCCTCTTCGCCGCT
GGAATGACTGCCCTCGGTATTCGCAAGGATGATATTTTAGTTATCTACGA
TGCAGACGAGATAGGCACATACCATGCCCCGCGGCTAGCGTTCATGTGTG
AGCTCTTTGGACATAAGGATGTGCATATCTTGAATAACCTGAGGCGGTAT
GTGAGGATGGGGCTGCCCGTAGGTTCAGGATCTGAGGGGATAGAGGTTCC
AGTGGTCGGGACTGGAAGAGAGCAAGGTGATGAGTATGTTGTGGAAGAGG
GGGATATTGATACCGGAAGGGTGATATCTTTCGAGGACGTGAAGAATTCC
GTTCTCGGGAAGGATCAGGAAAAGGTGAGGATTATCGATGCCAGAATACC
GGGTCGGTTTCAAGGTGTGCAGCCAGAAATGGATCCAAGTTTGAGGTCCG
GACACATCCCTGGAGCGGTCAATGTGCCATTGGCGAGGCTATTGGAGGAT
GGGGATGCAGTAATACTGGCTACCGAAAAACTGAGGAGTGTTCTGATGGA
TGCGGGCGCGTTGGCGGAAGAAGATGAGGGGATGCTGTACATTCTGACGT
GCAATTCGGGGGTCACGGCTGCATCACTAGATCTGGCTCTGAGGTTGGTT
GGGGCGAAGGGATCTAGAAGGGTGTATGATGGGAGCTGGATGGAGTGGAC
GCGGAGGGTAGGGGATGAACTGATCGAAGTTTCGTAGATGAACCCCTTCT
CCTCTCCTCTCATAACTCCAGCCGAATACCATCACAATGCCACAACATAC
AACGCCACCGGATCTAGGCGAATCATCCCCTTAGCAGCCTACCGTCCCAC
GCTCCACTCGTCCTTTGAATCCTTCCACCTTCCAGGCTCAAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008229KJC3_008229Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008229-T1KJC3_008229-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008229-T1.cdsKJC3_008229-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008229-T1.utr3p1KJC3_008229-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008229-T1.exon2KJC3_008229-T1.exon2Aspergillus niger KJC3exon
KJC3_008229-T1.exon1KJC3_008229-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008229-T1.utr5p1KJC3_008229-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.11
DBxrefInterPro:IPR036873
DBxrefInterPro:IPR001763
DBxrefPFAM:PF00581
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1325045..1326676 -
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