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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1378955..1381466- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008244-T2 ID=KJC3_008244-T2|Name=KJC3_008244-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2512bp|location=Sequence derived from alignment at ch6:1378955..1381466- (Aspergillus niger KJC3)
TTTTTTTTTACCTACCATTTATTTCTTTCACCACCTATTTTCATCCATTG
AAATATCATTCTTGTCTTTCTCCTCCCTCGAATGTTCTGCTCCCTTCCCA
GTATCTCACCACTGCATATCCCACCACTTACGAGTCAAGTCAGACCTTAA
ATCCCTACTACTTACTGTACTGGGTAAAGGACTCCTTTCCACCCCCGGTC
ACAAATTGGGTCTCCGCGGTGCTAATCTCGATCTGATCGTGCGGTGGGAA
TAGAATAGTCTGCCCGGTACTTCTTCCTTGTTTTCTCGTCGCTTCTACTA
CTAGTCAGTCTAGCCCTGGGGGGCGCAAAAAAAGAACTTCCATCAGGCCC
CCTCTTCTCCCCTTTTTGTTGTGTTCTGGAAACTCGCATTGGTTTCGTTG
TTCGACCAATCTTATTTTTATTTTAAGAAGAGAGGGTGGTGATTGATTTC
TGGGGATTGAAGCTAGTGGGGGGATCCGATCACCGTTGCTTATTATTACG
ATATCATTAGCGACTCGACTCTCTTAACTTTTTTCCCATCCCTTCCCGCA
TCGCCCGCCCGTCATCGCCTCTGCTCACTCACCATGTGTTCCGACCGCGC
TCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGTGCGTATCCCCCTTC
CATCATCACAATCAACCTTCAATTTGACTCTTGTCTCTCCTCTCTGCTCT
TAAAACTTTGTTTTTCTCTTTCCCGCTAATCTCTCTCACCCCCCGCACCA
CTACAGAACTTCAGCGACAATGACTCCACCTATCCCGGCTCGTAAGTTCC
TACCCGCGACCTACCCGACGTCTGGTTCCAACGGTTCGCGCTGACCGCAA
TCCAGGCTGGGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGAT
GAACTATGCGTAGGTTCTCCCTGTCCCGTCACCCTTGCGACCACTAACCA
ATTCAGATATGAGGTATAGGACTCCGTCTCGCATCCACCCTCCGAGCCAC
GGCTAAGTGTCGCAGAACGGTCGCAGATACCATTCCTACCACGAGGGAGA
ATACGTCCTGGTATGCCCATTCGATCGACCGTGTCCCCATCGCCCCTACT
GATCTCACAGCCCAATGATGAACAAGAACAAGATCGTCTCGACCTGGTTA
GTGGCGCAGCGCATTCTGAGACCGACGGGCGAGTCCAGGGTTGACCGGAA
CAGAGCCACCACATCTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGC
ACCGATTAAGAATCCCGCGCGCGTACTAGACATTGGAACTGGCACGGGAA
TCTGGGCGATCGACTATGCCGAGTAAGCGGGGAGATGTGATCCCTCCGAT
CATGAATAACAACGCTAATGCGGGCTGGCAGCGAGCATCCCGAGGCAGAA
GTGATCGGTACGATGAGCGACGCGACCACGGATGATGGATCACTGACAGG
ATGACGCAGGAAACGATCTCAGTCCCATTCAACCGTCCTGGTAGGTGTTG
CCCGCTGCTGCTGTGGAGGTCCCCCCTCACTGACCGTGCAGGATTCCGCC
GAATTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACAGCA
AGCCCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGCGAT
GTCGACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGGATG
GATGGAAATCGCCTCGATGGAGGTCAACACATACTCGGATGACGATACAC
ATTTGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATGACTGC
GCTCGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGAAAA
GATGGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGGTAA
TATTCCCGACGCATTGTCCCTTCCGTTCATTCTGACCGTCGCAGCTCCCC
CAAAGCCCCTGGCCGAAAGACCCCAAAATGAAAGATCTCGGTCGCTATCA
CCAAGTCAACATGTTCGAGGCGCTTGGCCCATACTGCTACGCGCTGTTCA
CGCGCGTGATGGGTTGGGAACGAACGGAGATCGAAGTGTTTGTGGCAGGC
ATGAAACAGGAGTTGCGCGACTTGAATAACCACTTGTACACGAAAGTGCA
CATCGTGTACGGACAAAAGCCGGAATGACATAAAGTGTGAGAGTCTCTGT
TTTGTCTCTGGTGTCGGCTGTTTTGGCTATCGGGGCTTTTCTCCTTGATC
ATGTGATATGAGCCCATTCATTAAGCGTCTTTCCACGTCATGTCCAGTAC
TTATTATCATAATGCTTGTTGAATACGATGTAGGGGAACCTACAATGACC
TATACTCTTTGCTTGATTGTTCAGGAAACATCACGATGATGTTTATACCC
TATCCGATTGAACAAGTTATTTTTAGAAATATATTTATAAGTACTACTAG
TAGGGCAATGCAGCACACATTGATACTAATACCACCCCTTCCTATTCAGC
CTTGAATATCAC back to topCoding sequence (CDS) from alignment at ch6:1378955..1381466- >KJC3_008244-T2 ID=KJC3_008244-T2|Name=KJC3_008244-T2|organism=Aspergillus niger KJC3|type=CDS|length=7980bp|location=Sequence derived from alignment at ch6:1378955..1381466- (Aspergillus niger KJC3)
GATTCCGCCGAATTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGT
CCTACAGCAAGCCCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGC
GTTCGCGATGTCGACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCC
CGGAGGATGGATGGAAATCGCCTCGATGGAGGTCAACACATACTCGGATG
ACGATACACATTTGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATG
CATGACTGCGCTCGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTG
GAAGGAAAAGATGGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCT
TCAAGGTAATATTCCCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACG
ATCTCAGTCCCATTCAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATC
GAGCCACCACATCTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCAC
CGATTAAGAATCCCGCGCGCGTACTAGACATTGGAACTGGCACGGGAATC
TGGGCGATCGACTATGCCGACCCAATGATGAACAAGAACAAGATCGTCTC
GACCTGAACGGTCGCAGATACCATTCCTACCACGAGGGAGAATACGTCCT
GATATGAGGCTGGGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGC
GATGAACTATGCAACTTCAGCGACAATGACTCCACCTATCCCGGCTCATG
TGTTCCGACCGCGCTCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGA
TTCCGCCGAATTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCC
TACAGCAAGCCCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGT
TCGCGATGTCGACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCG
GAGGATGGATGGAAATCGCCTCGATGGAGGTCAACACATACTCGGATGAC
GATACACATTTGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCA
TGACTGCGCTCGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGA
AGGAAAAGATGGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTC
AAGGTAATATTCCCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACGAT
CTCAGTCCCATTCAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGA
GCCACCACATCTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCG
ATTAAGAATCCCGCGCGCGTACTAGACATTGGAACTGGCACGGGAATCTG
GGCGATCGACTATGCCGACCCAATGATGAACAAGAACAAGATCGTCTCGA
CCTGAACGGTCGCAGATACCATTCCTACCACGAGGGAGAATACGTCCTGA
TATGAGGCTGGGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGA
TGAACTATGCAACTTCAGCGACAATGACTCCACCTATCCCGGCTCATGTG
TTCCGACCGCGCTCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGATT
CCGCCGAATTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTA
CAGCAAGCCCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTC
GCGATGTCGACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGA
GGATGGATGGAAATCGCCTCGATGGAGGTCAACACATACTCGGATGACGA
TACACATTTGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATG
ACTGCGCTCGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAG
GAAAAGATGGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAA
GGTAATATTCCCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCT
CAGTCCCATTCAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGC
CACCACATCTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGAT
TAAGAATCCCGCGCGCGTACTAGACATTGGAACTGGCACGGGAATCTGGG
CGATCGACTATGCCGACCCAATGATGAACAAGAACAAGATCGTCTCGACC
TGAACGGTCGCAGATACCATTCCTACCACGAGGGAGAATACGTCCTGATA
TGAGGCTGGGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGATG
AACTATGCAACTTCAGCGACAATGACTCCACCTATCCCGGCTCATGTGTT
CCGACCGCGCTCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGATTCC
GCCGAATTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACA
GCAAGCCCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGC
GATGTCGACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGG
ATGGATGGAAATCGCCTCGATGGAGGTCAACACATACTCGGATGACGATA
CACATTTGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATGAC
TGCGCTCGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGA
AAAGATGGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGG
TAATATTCCCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCTCA
GTCCCATTCAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGCCA
CCACATCTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGATTA
AGAATCCCGCGCGCGTACTAGACATTGGAACTGGCACGGGAATCTGGGCG
ATCGACTATGCCGACCCAATGATGAACAAGAACAAGATCGTCTCGACCTG
AACGGTCGCAGATACCATTCCTACCACGAGGGAGAATACGTCCTGATATG
AGGCTGGGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGATGAA
CTATGCAACTTCAGCGACAATGACTCCACCTATCCCGGCTCATGTGTTCC
GACCGCGCTCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGATTCCGC
CGAATTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACAGC
AAGCCCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGCGA
TGTCGACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGGAT
GGATGGAAATCGCCTCGATGGAGGTCAACACATACTCGGATGACGATACA
CATTTGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATGACTG
CGCTCGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGAAA
AGATGGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGGTA
ATATTCCCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCTCAGT
CCCATTCAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGCCACC
ACATCTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGATTAAG
AATCCCGCGCGCGTACTAGACATTGGAACTGGCACGGGAATCTGGGCGAT
CGACTATGCCGACCCAATGATGAACAAGAACAAGATCGTCTCGACCTGAA
CGGTCGCAGATACCATTCCTACCACGAGGGAGAATACGTCCTGATATGAG
GCTGGGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGATGAACT
ATGCAACTTCAGCGACAATGACTCCACCTATCCCGGCTCATGTGTTCCGA
CCGCGCTCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGATTCCGCCG
AATTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACAGCAA
GCCCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGCGATG
TCGACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGGATGG
ATGGAAATCGCCTCGATGGAGGTCAACACATACTCGGATGACGATACACA
TTTGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATGACTGCG
CTCGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGAAAAG
ATGGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGGTAAT
ATTCCCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCTCAGTCC
CATTCAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGCCACCAC
ATCTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGATTAAGAA
TCCCGCGCGCGTACTAGACATTGGAACTGGCACGGGAATCTGGGCGATCG
ACTATGCCGACCCAATGATGAACAAGAACAAGATCGTCTCGACCTGAACG
GTCGCAGATACCATTCCTACCACGAGGGAGAATACGTCCTGATATGAGGC
TGGGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGATGAACTAT
GCAACTTCAGCGACAATGACTCCACCTATCCCGGCTCATGTGTTCCGACC
GCGCTCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGATTCCGCCGAA
TTGCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACAGCAAGC
CCTTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGCGATGTC
GACAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGGATGGAT
GGAAATCGCCTCGATGGAGGTCAACACATACTCGGATGACGATACACATT
TGCGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATGACTGCGCT
CGGGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGAAAAGAT
GGAAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGGTAATAT
TCCCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCTCAGTCCCA
TTCAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGCCACCACAT
CTATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGATTAAGAATC
CCGCGCGCGTACTAGACATTGGAACTGGCACGGGAATCTGGGCGATCGAC
TATGCCGACCCAATGATGAACAAGAACAAGATCGTCTCGACCTGAACGGT
CGCAGATACCATTCCTACCACGAGGGAGAATACGTCCTGATATGAGGCTG
GGCGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGATGAACTATGC
AACTTCAGCGACAATGACTCCACCTATCCCGGCTCATGTGTTCCGACCGC
GCTCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGATTCCGCCGAATT
GCCGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACAGCAAGCCC
TTTGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGCGATGTCGA
CAACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGGATGGATGG
AAATCGCCTCGATGGAGGTCAACACATACTCGGATGACGATACACATTTG
CGGGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATGACTGCGCTCG
GGAGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGAAAAGATGG
AAAAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGGTAATATTC
CCGACGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCTCAGTCCCATT
CAACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGCCACCACATCT
ATCGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGATTAAGAATCCC
GCGCGCGTACTAGACATTGGAACTGGCACGGGAATCTGGGCGATCGACTA
TGCCGACCCAATGATGAACAAGAACAAGATCGTCTCGACCTGAACGGTCG
CAGATACCATTCCTACCACGAGGGAGAATACGTCCTGATATGAGGCTGGG
CGATGCCAGCTACACCACCAGCATCACGTCCAGTGCGATGAACTATGCAA
CTTCAGCGACAATGACTCCACCTATCCCGGCTCATGTGTTCCGACCGCGC
TCCTCCCCCGGACTCCAGCGTCATTGAACCTGATGATTCCGCCGAATTGC
CGATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACAGCAAGCCCTT
TGATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGCGATGTCGACA
ACCTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGGATGGATGGAA
ATCGCCTCGATGGAGGTCAACACATACTCGGATGACGATACACATTTGCG
GGCCAAAAATCTACTGGAGGGTATAGTGTATATGCATGACTGCGCTCGGG
AGTATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGAAAAGATGGAA
AAGGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGGTAATATTCCC
GACGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCTCAGTCCCATTCA
ACCGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGCCACCACATCTAT
CGCATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGATTAAGAATCCCGC
GCGCGTACTAGACATTGGAACTGGCACGGGAATCTGGGCGATCGACTATG
CCGACCCAATGATGAACAAGAACAAGATCGTCTCGACCTGAACGGTCGCA
GATACCATTCCTACCACGAGGGAGAATACGTCCTGATATGAGGCTGGGCG
ATGCCAGCTACACCACCAGCATCACGTCCAGTGCGATGAACTATGCAACT
TCAGCGACAATGACTCCACCTATCCCGGCTCATGTGTTCCGACCGCGCTC
CTCCCCCGGACTCCAGCGTCATTGAACCTGATGATTCCGCCGAATTGCCG
ATTCGAAGTCGATGATTTTGAGCAACCGTGGTCCTACAGCAAGCCCTTTG
ATTATATTCACGGTCGGGAGTTGGAGGGCTGCGTTCGCGATGTCGACAAC
CTCTTTCGGCAAGCACTCGAGAATCTGAAGCCCGGAGGATGGATGGAAAT
CGCCTCGATGGAGGTCAACACATACTCGGATGACGATACACATTTGCGGG
CCAAAAATCTACTGGAGGGTATAGTGTATATGCATGACTGCGCTCGGGAG
TATGGAAAGGACATGGCCAGTGTGCACACCTGGAAGGAAAAGATGGAAAA
GGCCGGTTTTGTCAATGTCCGGGAAGAGATCTTCAAGGTAATATTCCCGA
CGCATTGTCCCTTCCGTTCATTCTGAGAAACGATCTCAGTCCCATTCAAC
CGTCCTGCGAGCATCCCGAGGCAGAAGTGATCGAGCCACCACATCTATCG
CATGCTCTTCAAGGGAGAGCTGAACCGAGCACCGATTAAGAATCCCGCGC
GCGTACTAGACATTGGAACTGGCACGGGAATCTGGGCGATCGACTATGCC
GACCCAATGATGAACAAGAACAAGATCGTCTCGACCTGAACGGTCGCAGA
TACCATTCCTACCACGAGGGAGAATACGTCCTGATATGAGGCTGGGCGAT
GCCAGCTACACCACCAGCATCACGTCCAGTGCGATGAACTATGCAACTTC
AGCGACAATGACTCCACCTATCCCGGCTCATGTGTTCCGACCGCGCTCCT
CCCCCGGACTCCAGCGTCATTGAACCTGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008244-T2.utr3p1 | KJC3_008244-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | PFAM:PF13847 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1378955..1381466 - |
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