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KJC3_008249-T1, KJC3_008249-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008249-T1
Unique NameKJC3_008249-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1394812..1397034+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008249-T1 ID=KJC3_008249-T1|Name=KJC3_008249-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2223bp|location=Sequence derived from alignment at ch6:1394812..1397034+ (Aspergillus niger KJC3)
ATTCCATTATGGACTGCTATACAAGTCGCAGAAGGAAAAGGGCACGACTA
TCATGTGTGGAATGTCATCGCCGGAAAGTCCGTTGCGATCGCAATGACCC
ATGTCGCAGGTGCTCCAAGGCAAAGATTCGGTGTTTCTATGACACTGACG
ACAGACCAAGAGCATCTTGGAGTCATGGAAGATCTCTCGCAAATGACCAA
GTGCCAGTGAGACAATCGTCTACGGTTACTACAGGAATAGCCTCCCATGC
CCTACATGATACATCTCAAAGCTACATTGCGACTCAAGAAATCCCTCCAT
CTTCACTGGGCCATAGCCCTGAGGCAAGCGTACGTGGGACTATGTCCAAA
AGCCGTCTTTTGGGCACTACCCATCCCATTACAACATACCTTCAGGTCTG
TGGCCTTATCCCTGTCTGGACCCATTGTCATGTTACTAAAGAGATCAGTG
TGATGAAATATACTCGGCCAATTCCAGTCTTCACTCCGCGGGACGCAGAG
ATAGTGCGTGGTCAACACTCTCAGTGGAGGCTCAAACCCTAATTGCGACC
TCGAAAGCAATGGCACGAACTGCAAAGAAGCAATATGCATGCGGAAACTC
CACGCTTGACGACGCAGCGAGGGCTCTACCACCCCCGGAGGTTTGTGATG
TAGTCGTCCGCCATTATATGCGCATACTGGAAGGACCGTTTCGCATCCTC
CACCGTGTAGCCTTCCAGAGAGAATACTCTGCGTTTTGGGAAAATAGTAC
CAAGAGACGGCCTATATTTACCGTTATTCTTTGTCTGGTGATGTCAATTG
GTGTTCACTTTTGCCACGATGAAAATTTTGAGGCTCGTATTCGTCCTCAT
ATTCTTCTGTGGCTGCATGTTGCCCAATCGTGGCTTTCGAACGCGAGGGG
CAAGGATCTAGCCACCATATCTGGATTACAGACTCAATGCTTGCTGTCTG
TATCACTTCAGTTCAATGAGGGCAATCTCCAAAGGATTTGGTTCGCACAA
GGGGTGCTCCTGCGAAACGCTATGTACATGGGACTACATCGTGACGGGAG
GCATTTTCCTGACATGCCGTTCTACCACGTCGAGATGCGCCGAAGGTTGT
GGAGCACCATACTTGAACTGGACTTGCAGGTCACGTTGGACTTGGGAATG
GTCCCCACCACAAGCGAGCATGAGTTTGATAGTTTACCGCCTATGAATTT
GGATGATGAAGTATTTAATGAAACAACCAAAGCCGCTCCTACACCAGCCG
CCAATTCAGCACCAACCGATAGTTCGCTACAGATCACCCTCCGACGAACC
CTAGTACACCGCATGATGATCGCTCGACTTATGAACGACTCGTTCAATGA
ACCTTCCTACGAAGATATATTGCAAGCAACCAACGAGCTGACGAAGCTGC
TGTCCACCACTAAACAACGCCTAGACGTTCTGGTCACGGAAGGAAAAGCA
AGCCCGGCTCATCAAAATCTAATAGACTTCCTCACACGCCGCTTCCTAAT
CGCTATGCATCGGCCCTTCGCAACAAAGGCTTTCCAGGACCGCCGTTATC
ACTACTCCCGCCAGGTCTGCCTCGACAACGCCCTACTTATACTCACACCA
GAGCATGACCCAGATTTTCACCGAATGCTCCTGACATCTGTGACACTCTT
CCGACATATAATGCACCATGCTGCTATATCACTATGCCTGGAGATCATGG
GACAGATCAAGGAGGATCAACTAGACAAAAAGTTGTTCCAGATACGCCAG
CAAGACCGATCGCGTCTCCTTGCCTCGGTCCAACAAATCCCGCAAATCAC
TGCAGAGCGTCTCCGGTTACGCGAAACAAATGTGAAAAGTCATGTATTTC
ATTGTATGGCGATCGCACAGATTGAGGCTCTGGAAAATGGACTGGATGTC
ACGGGCCATGTACTGACCGCCTCGGTTGCAAGTGCACGGCAGGCTCTAGA
GATTTTACAGCAACGAGTTACGGCGAATAAGGATGGGGGAGACCATGTCT
TCTCAGTAGGCTCGGAACTGGAACTTGCGAAAACGGATGAATTTCTGCCA
CCCACACTCTTCCGAAACGATGATACGGGATTTGACTTGGGAGAAATGAC
GAGCTGGCTATTCTCAGACTGGGTTGATGAATATCCCTTGTAGCCATATT
CATGCACCAGCCGCGAAGAGACGTACTGGAATAGTTAGTGATATGCCGTC
ATGGATGAAATATACTTGGCAAT
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Coding sequence (CDS) from alignment at ch6:1394812..1397034+

>KJC3_008249-T1 ID=KJC3_008249-T1|Name=KJC3_008249-T1|organism=Aspergillus niger KJC3|type=CDS|length=4164bp|location=Sequence derived from alignment at ch6:1394812..1397034+ (Aspergillus niger KJC3)
ATGGACTGCTATACAAGTCGCAGAAGGAAAAGGGCACGACTATCATGTGT
GGAATGTCATCGCCGGAAAGTCCGTTGCGATCGCAATGACCCATGTCGCA
GGTGCTCCAAGGCAAAGATTCGGTGTTTCTATGACACTGACGACAGACCA
AGAGCATCTTGGAGTCATGGAAGATCTCTCGCAAATGACCAAGTGCCAGT
GAGACAATCGTCTACGGTTACTACAGGAATAGCCTCCCATGCCCTACATG
ATACATCTCAAAGCTACATTGCGACTCAAGAAATCCCTCCATCTTCACTG
GGCCATAGCCCTGAGGCAAGCGTACGTGGGACTATGTCCAAAAGCCGTCT
TTTGGGCACTACCCATCCCATTACAACATACCTTCAGTGTGATGAAATAT
ACTCGGCCAATTCCAGTCTTCACTCCGCGGGACGCAGAGATAGTGCGTGG
TCAACACTCTCAGTGGAGGCTCAAACCCTAATTGCGACCTCGAAAGCAAT
GGCACGAACTGCAAAGAAGCAATATGCATGCGGAAACTCCACGCTTGACG
ACGCAGCGAGGGCTCTACCACCCCCGGAGGTTTGTGATGTAGTCGTCCGC
CATTATATGCGCATACTGGAAGGACCGTTTCGCATCCTCCACCGTGTAGC
CTTCCAGAGAGAATACTCTGCGTTTTGGGAAAATAGTACCAAGAGACGGC
CTATATTTACCGTTATTCTTTGTCTGGTGATGTCAATTGGTGTTCACTTT
TGCCACGATGAAAATTTTGAGGCTCGTATTCGTCCTCATATTCTTCTGTG
GCTGCATGTTGCCCAATCGTGGCTTTCGAACGCGAGGGGCAAGGATCTAG
CCACCATATCTGGATTACAGACTCAATGCTTGCTGTCTGTATCACTTCAG
TTCAATGAGGGCAATCTCCAAAGGATTTGGTTCGCACAAGGGGTGCTCCT
GCGAAACGCTATGTACATGGGACTACATCGTGACGGGAGGCATTTTCCTG
ACATGCCGTTCTACCACGTCGAGATGCGCCGAAGGTTGTGGAGCACCATA
CTTGAACTGGACTTGCAGGTCACGTTGGACTTGGGAATGGTCCCCACCAC
AAGCGAGCATGAGTTTGATAGTTTACCGCCTATGAATTTGGATGATGAAG
TATTTAATGAAACAACCAAAGCCGCTCCTACACCAGCCGCCAATTCAGCA
CCAACCGATAGTTCGCTACAGATCACCCTCCGACGAACCCTAGTACACCG
CATGATGATCGCTCGACTTATGAACGACTCGTTCAATGAACCTTCCTACG
AAGATATATTGCAAGCAACCAACGAGCTGACGAAGCTGCTGTCCACCACT
AAACAACGCCTAGACGTTCTGGTCACGGAAGGAAAAGCAAGCCCGGCTCA
TCAAAATCTAATAGACTTCCTCACACGCCGCTTCCTAATCGCTATGCATC
GGCCCTTCGCAACAAAGGCTTTCCAGGACCGCCGTTATCACTACTCCCGC
CAGGTCTGCCTCGACAACGCCCTACTTATACTCACACCAGAGCATGACCC
AGATTTTCACCGAATGCTCCTGACATCTGTGACACTCTTCCGACATATAA
TGCACCATGCTGCTATATCACTATGCCTGGAGATCATGGGACAGATCAAG
GAGGATCAACTAGACAAAAAGTTGTTCCAGATACGCCAGCAAGACCGATC
GCGTCTCCTTGCCTCGGTCCAACAAATCCCGCAAATCACTGCAGAGCGTC
TCCGGTTACGCGAAACAAATGTGAAAAGTCATGTATTTCATTGTATGGCG
ATCGCACAGATTGAGGCTCTGGAAAATGGACTGGATGTCACGGGCCATGT
ACTGACCGCCTCGGTTGCAAGTGCACGGCAGGCTCTAGAGATTTTACAGC
AACGAGTTACGGCGAATAAGGATGGGGGAGACCATGTCTTCTCAGTAGGC
TCGGAACTGGAACTTGCGAAAACGGATGAATTTCTGCCACCCACACTCTT
CCGAAACGATGATACGGGATTTGACTTGGGAGAAATGACGAGCTGGCTAT
TCTCAGACTGGGTTGATGAATATCCCTTGTAGATGGACTGCTATACAAGT
CGCAGAAGGAAAAGGGCACGACTATCATGTGTGGAATGTCATCGCCGGAA
AGTCCGTTGCGATCGCAATGACCCATGTCGCAGGTGCTCCAAGGCAAAGA
TTCGGTGTTTCTATGACACTGACGACAGACCAAGAGCATCTTGGAGTCAT
GGAAGATCTCTCGCAAATGACCAAGTGCCAGTGAGACAATCGTCTACGGT
TACTACAGGAATAGCCTCCCATGCCCTACATGATACATCTCAAAGCTACA
TTGCGACTCAAGAAATCCCTCCATCTTCACTGGGCCATAGCCCTGAGGCA
AGCGTACGTGGGACTATGTCCAAAAGCCGTCTTTTGGGCACTACCCATCC
CATTACAACATACCTTCAGTGTGATGAAATATACTCGGCCAATTCCAGTC
TTCACTCCGCGGGACGCAGAGATAGTGCGTGGTCAACACTCTCAGTGGAG
GCTCAAACCCTAATTGCGACCTCGAAAGCAATGGCACGAACTGCAAAGAA
GCAATATGCATGCGGAAACTCCACGCTTGACGACGCAGCGAGGGCTCTAC
CACCCCCGGAGGTTTGTGATGTAGTCGTCCGCCATTATATGCGCATACTG
GAAGGACCGTTTCGCATCCTCCACCGTGTAGCCTTCCAGAGAGAATACTC
TGCGTTTTGGGAAAATAGTACCAAGAGACGGCCTATATTTACCGTTATTC
TTTGTCTGGTGATGTCAATTGGTGTTCACTTTTGCCACGATGAAAATTTT
GAGGCTCGTATTCGTCCTCATATTCTTCTGTGGCTGCATGTTGCCCAATC
GTGGCTTTCGAACGCGAGGGGCAAGGATCTAGCCACCATATCTGGATTAC
AGACTCAATGCTTGCTGTCTGTATCACTTCAGTTCAATGAGGGCAATCTC
CAAAGGATTTGGTTCGCACAAGGGGTGCTCCTGCGAAACGCTATGTACAT
GGGACTACATCGTGACGGGAGGCATTTTCCTGACATGCCGTTCTACCACG
TCGAGATGCGCCGAAGGTTGTGGAGCACCATACTTGAACTGGACTTGCAG
GTCACGTTGGACTTGGGAATGGTCCCCACCACAAGCGAGCATGAGTTTGA
TAGTTTACCGCCTATGAATTTGGATGATGAAGTATTTAATGAAACAACCA
AAGCCGCTCCTACACCAGCCGCCAATTCAGCACCAACCGATAGTTCGCTA
CAGATCACCCTCCGACGAACCCTAGTACACCGCATGATGATCGCTCGACT
TATGAACGACTCGTTCAATGAACCTTCCTACGAAGATATATTGCAAGCAA
CCAACGAGCTGACGAAGCTGCTGTCCACCACTAAACAACGCCTAGACGTT
CTGGTCACGGAAGGAAAAGCAAGCCCGGCTCATCAAAATCTAATAGACTT
CCTCACACGCCGCTTCCTAATCGCTATGCATCGGCCCTTCGCAACAAAGG
CTTTCCAGGACCGCCGTTATCACTACTCCCGCCAGGTCTGCCTCGACAAC
GCCCTACTTATACTCACACCAGAGCATGACCCAGATTTTCACCGAATGCT
CCTGACATCTGTGACACTCTTCCGACATATAATGCACCATGCTGCTATAT
CACTATGCCTGGAGATCATGGGACAGATCAAGGAGGATCAACTAGACAAA
AAGTTGTTCCAGATACGCCAGCAAGACCGATCGCGTCTCCTTGCCTCGGT
CCAACAAATCCCGCAAATCACTGCAGAGCGTCTCCGGTTACGCGAAACAA
ATGTGAAAAGTCATGTATTTCATTGTATGGCGATCGCACAGATTGAGGCT
CTGGAAAATGGACTGGATGTCACGGGCCATGTACTGACCGCCTCGGTTGC
AAGTGCACGGCAGGCTCTAGAGATTTTACAGCAACGAGTTACGGCGAATA
AGGATGGGGGAGACCATGTCTTCTCAGTAGGCTCGGAACTGGAACTTGCG
AAAACGGATGAATTTCTGCCACCCACACTCTTCCGAAACGATGATACGGG
ATTTGACTTGGGAGAAATGACGAGCTGGCTATTCTCAGACTGGGTTGATG
AATATCCCTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008249KJC3_008249Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008249-T1.utr5p1KJC3_008249-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008249-T1.exon1KJC3_008249-T1.exon1Aspergillus niger KJC3exon
KJC3_008249-T1.exon2KJC3_008249-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008249-T1.cdsKJC3_008249-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008249-T1.utr3p1KJC3_008249-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008249-T1KJC3_008249-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1394812..1397034 +
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