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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1428772..1430048- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008259-T1 ID=KJC3_008259-T1|Name=KJC3_008259-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1277bp|location=Sequence derived from alignment at ch6:1428772..1430048- (Aspergillus niger KJC3)
ATGGAAATTCAAATCGAACTCGACGAAAGGAAGCCGTTCTATACAAACGA
AGACCGGGTTATCGGCCATGTCATCCTCCGCAATGATACCGAGGTTGACA
TCGCCACTATAACAATTAGTCTATCCGGGCAGGCAATATCCAGGCTTGAC
TCGGGAAAATTGACGGAATCACACAAGGTATGTGCTGCTATTACAGCACT
GGGTTCAGATAAGCTAACTTTACCGAAAAAAAGCTCTTCCAACGAAATGA
GCAAATATTCCCGCCCAGCAATTGCGTCGGTTGGTTGACATCGGCGTCCG
TTACAATTCCCCCGGGAGAACACTCGTTTCCATTTTGTATCATGGTTCGT
GTTTGCACCTGCGCATGGTCTTAATGAAAACCGCATCTAATATTTTCTAG
TTTCCTCAGGTCTCAGAATGCTACAAGGATAGCACTAGAGATGCCGCTCG
CAAGCGGTCGGCAACCCGTCAGCCACACCACCTCTTACGAAAGCTTCCAC
CGTCCAGTGGGAATTTATACACTCCCGAGGAGATCAGATATTCTCTGGAT
GCTACCATCACATGGAATGGGCTCCTATACAGAAGTCACGAATCCGTTGA
GTCTCCCTTCTCGGGTAGCTATGGCCTGTACTAACAGTATCAAACAGACC
CGCACCATATCCTTTCATCCGGTGTCTGCCATCCCTAAGCCATTACAGAG
TGTATCAGTCCGGAAAATTGTGACTTGCAGTACGAAGGCAGCGGAGCTAT
TACGTCCTCCACTAACTTACGAGGTCGAAGTCGAACTGGTGAATGGTCCG
TTTGTTTTGCTTGGACACCCAATTGCGCTGGGTGTAAAAGTTATCAACGT
AAATGACGAGAAACTCGACATATCACTACGCGACTTTCAGTCAATGCTTA
TCGAAACAACAGATATCCGAGCACATGGTATTATACAGCGCGTTACTCGG
TCATGGATTATACAGACCATGACAAACTTAAGTCAACCGTTTGTGACTGG
CGGAGGGCCGACTGCCGGCTTCGTAATGAGCCTGGACGAGGGGGTATGGA
GTAGACATTCTGTACCACATTGTCTGACCCCTACTTTTGAAACGTGCAAT
GTGACCCGGAGCTTCAAGCTGGAGATCAGGCTCGGCATTGAATTTGGTCG
CTACAATGTGAGTTATCAAGACCGTTTTGAATTCAAAAGCTAACTATGGT
TGCAGTCAAGGATATTGGAGTTTCTCTTCCCAGTGTGTGTTTTGTCCCCA
TCATACACGCCGTCCGGTTCAAAGTAA back to topCoding sequence (CDS) from alignment at ch6:1428772..1430048- >KJC3_008259-T1 ID=KJC3_008259-T1|Name=KJC3_008259-T1|organism=Aspergillus niger KJC3|type=CDS|length=5325bp|location=Sequence derived from alignment at ch6:1428772..1430048- (Aspergillus niger KJC3)
TCAAGGATATTGGAGTTTCTCTTCCCAGTGTGTGTTTTGTCCCCATCATA
CACGCCGTCCGGTTCAAAGTAAACCCGCACCATATCCTTTCATCCGGTGT
CTGCCATCCCTAAGCCATTACAGAGTGTATCAGTCCGGAAAATTGTGACT
TGCAGTACGAAGGCAGCGGAGCTATTACGTCCTCCACTAACTTACGAGGT
CGAAGTCGAACTGGTGAATGGTCCGTTTGTTTTGCTTGGACACCCAATTG
CGCTGGGTGTAAAAGTTATCAACGTAAATGACGAGAAACTCGACATATCA
CTACGCGACTTTCAGTCAATGCTTATCGAAACAACAGATATCCGAGCACA
TGGTATTATACAGCGCGTTACTCGGTCATGGATTATACAGACCATGACAA
ACTTAAGTCAACCGTTTGTGACTGGCGGAGGGCCGACTGCCGGCTTCGTA
ATGAGCCTGGACGAGGGGGTATGGAGTAGACATTCTGTACCACATTGTCT
GACCCCTACTTTTGAAACGTGCAATGTGACCCGGAGCTTCAAGCTGGAGA
TCAGGCTCGGCATTGAATTTGGTCGCTACAATTTTCCTCAGGTCTCAGAA
TGCTACAAGGATAGCACTAGAGATGCCGCTCGCAAGCGGTCGGCAACCCG
TCAGCCACACCACCTCTTACGAAAGCTTCCACCGTCCAGTGGGAATTTAT
ACACTCCCGAGGAGATCAGATATTCTCTGGATGCTACCATCACATGGAAT
GGGCTCCTATACAGAAGTCACGAATCCCTCTTCCAACGAAATGAGCAAAT
ATTCCCGCCCAGCAATTGCGTCGGTTGGTTGACATCGGCGTCCGTTACAA
TTCCCCCGGGAGAACACTCGTTTCCATTTTGTATCATGATGGAAATTCAA
ATCGAACTCGACGAAAGGAAGCCGTTCTATACAAACGAAGACCGGGTTAT
CGGCCATGTCATCCTCCGCAATGATACCGAGGTTGACATCGCCACTATAA
CAATTAGTCTATCCGGGCAGGCAATATCCAGGCTTGACTCGGGAAAATTG
ACGGAATCACACAAGTCAAGGATATTGGAGTTTCTCTTCCCAGTGTGTGT
TTTGTCCCCATCATACACGCCGTCCGGTTCAAAGTAAACCCGCACCATAT
CCTTTCATCCGGTGTCTGCCATCCCTAAGCCATTACAGAGTGTATCAGTC
CGGAAAATTGTGACTTGCAGTACGAAGGCAGCGGAGCTATTACGTCCTCC
ACTAACTTACGAGGTCGAAGTCGAACTGGTGAATGGTCCGTTTGTTTTGC
TTGGACACCCAATTGCGCTGGGTGTAAAAGTTATCAACGTAAATGACGAG
AAACTCGACATATCACTACGCGACTTTCAGTCAATGCTTATCGAAACAAC
AGATATCCGAGCACATGGTATTATACAGCGCGTTACTCGGTCATGGATTA
TACAGACCATGACAAACTTAAGTCAACCGTTTGTGACTGGCGGAGGGCCG
ACTGCCGGCTTCGTAATGAGCCTGGACGAGGGGGTATGGAGTAGACATTC
TGTACCACATTGTCTGACCCCTACTTTTGAAACGTGCAATGTGACCCGGA
GCTTCAAGCTGGAGATCAGGCTCGGCATTGAATTTGGTCGCTACAATTTT
CCTCAGGTCTCAGAATGCTACAAGGATAGCACTAGAGATGCCGCTCGCAA
GCGGTCGGCAACCCGTCAGCCACACCACCTCTTACGAAAGCTTCCACCGT
CCAGTGGGAATTTATACACTCCCGAGGAGATCAGATATTCTCTGGATGCT
ACCATCACATGGAATGGGCTCCTATACAGAAGTCACGAATCCCTCTTCCA
ACGAAATGAGCAAATATTCCCGCCCAGCAATTGCGTCGGTTGGTTGACAT
CGGCGTCCGTTACAATTCCCCCGGGAGAACACTCGTTTCCATTTTGTATC
ATGATGGAAATTCAAATCGAACTCGACGAAAGGAAGCCGTTCTATACAAA
CGAAGACCGGGTTATCGGCCATGTCATCCTCCGCAATGATACCGAGGTTG
ACATCGCCACTATAACAATTAGTCTATCCGGGCAGGCAATATCCAGGCTT
GACTCGGGAAAATTGACGGAATCACACAAGTCAAGGATATTGGAGTTTCT
CTTCCCAGTGTGTGTTTTGTCCCCATCATACACGCCGTCCGGTTCAAAGT
AAACCCGCACCATATCCTTTCATCCGGTGTCTGCCATCCCTAAGCCATTA
CAGAGTGTATCAGTCCGGAAAATTGTGACTTGCAGTACGAAGGCAGCGGA
GCTATTACGTCCTCCACTAACTTACGAGGTCGAAGTCGAACTGGTGAATG
GTCCGTTTGTTTTGCTTGGACACCCAATTGCGCTGGGTGTAAAAGTTATC
AACGTAAATGACGAGAAACTCGACATATCACTACGCGACTTTCAGTCAAT
GCTTATCGAAACAACAGATATCCGAGCACATGGTATTATACAGCGCGTTA
CTCGGTCATGGATTATACAGACCATGACAAACTTAAGTCAACCGTTTGTG
ACTGGCGGAGGGCCGACTGCCGGCTTCGTAATGAGCCTGGACGAGGGGGT
ATGGAGTAGACATTCTGTACCACATTGTCTGACCCCTACTTTTGAAACGT
GCAATGTGACCCGGAGCTTCAAGCTGGAGATCAGGCTCGGCATTGAATTT
GGTCGCTACAATTTTCCTCAGGTCTCAGAATGCTACAAGGATAGCACTAG
AGATGCCGCTCGCAAGCGGTCGGCAACCCGTCAGCCACACCACCTCTTAC
GAAAGCTTCCACCGTCCAGTGGGAATTTATACACTCCCGAGGAGATCAGA
TATTCTCTGGATGCTACCATCACATGGAATGGGCTCCTATACAGAAGTCA
CGAATCCCTCTTCCAACGAAATGAGCAAATATTCCCGCCCAGCAATTGCG
TCGGTTGGTTGACATCGGCGTCCGTTACAATTCCCCCGGGAGAACACTCG
TTTCCATTTTGTATCATGATGGAAATTCAAATCGAACTCGACGAAAGGAA
GCCGTTCTATACAAACGAAGACCGGGTTATCGGCCATGTCATCCTCCGCA
ATGATACCGAGGTTGACATCGCCACTATAACAATTAGTCTATCCGGGCAG
GCAATATCCAGGCTTGACTCGGGAAAATTGACGGAATCACACAAGTCAAG
GATATTGGAGTTTCTCTTCCCAGTGTGTGTTTTGTCCCCATCATACACGC
CGTCCGGTTCAAAGTAAACCCGCACCATATCCTTTCATCCGGTGTCTGCC
ATCCCTAAGCCATTACAGAGTGTATCAGTCCGGAAAATTGTGACTTGCAG
TACGAAGGCAGCGGAGCTATTACGTCCTCCACTAACTTACGAGGTCGAAG
TCGAACTGGTGAATGGTCCGTTTGTTTTGCTTGGACACCCAATTGCGCTG
GGTGTAAAAGTTATCAACGTAAATGACGAGAAACTCGACATATCACTACG
CGACTTTCAGTCAATGCTTATCGAAACAACAGATATCCGAGCACATGGTA
TTATACAGCGCGTTACTCGGTCATGGATTATACAGACCATGACAAACTTA
AGTCAACCGTTTGTGACTGGCGGAGGGCCGACTGCCGGCTTCGTAATGAG
CCTGGACGAGGGGGTATGGAGTAGACATTCTGTACCACATTGTCTGACCC
CTACTTTTGAAACGTGCAATGTGACCCGGAGCTTCAAGCTGGAGATCAGG
CTCGGCATTGAATTTGGTCGCTACAATTTTCCTCAGGTCTCAGAATGCTA
CAAGGATAGCACTAGAGATGCCGCTCGCAAGCGGTCGGCAACCCGTCAGC
CACACCACCTCTTACGAAAGCTTCCACCGTCCAGTGGGAATTTATACACT
CCCGAGGAGATCAGATATTCTCTGGATGCTACCATCACATGGAATGGGCT
CCTATACAGAAGTCACGAATCCCTCTTCCAACGAAATGAGCAAATATTCC
CGCCCAGCAATTGCGTCGGTTGGTTGACATCGGCGTCCGTTACAATTCCC
CCGGGAGAACACTCGTTTCCATTTTGTATCATGATGGAAATTCAAATCGA
ACTCGACGAAAGGAAGCCGTTCTATACAAACGAAGACCGGGTTATCGGCC
ATGTCATCCTCCGCAATGATACCGAGGTTGACATCGCCACTATAACAATT
AGTCTATCCGGGCAGGCAATATCCAGGCTTGACTCGGGAAAATTGACGGA
ATCACACAAGTCAAGGATATTGGAGTTTCTCTTCCCAGTGTGTGTTTTGT
CCCCATCATACACGCCGTCCGGTTCAAAGTAAACCCGCACCATATCCTTT
CATCCGGTGTCTGCCATCCCTAAGCCATTACAGAGTGTATCAGTCCGGAA
AATTGTGACTTGCAGTACGAAGGCAGCGGAGCTATTACGTCCTCCACTAA
CTTACGAGGTCGAAGTCGAACTGGTGAATGGTCCGTTTGTTTTGCTTGGA
CACCCAATTGCGCTGGGTGTAAAAGTTATCAACGTAAATGACGAGAAACT
CGACATATCACTACGCGACTTTCAGTCAATGCTTATCGAAACAACAGATA
TCCGAGCACATGGTATTATACAGCGCGTTACTCGGTCATGGATTATACAG
ACCATGACAAACTTAAGTCAACCGTTTGTGACTGGCGGAGGGCCGACTGC
CGGCTTCGTAATGAGCCTGGACGAGGGGGTATGGAGTAGACATTCTGTAC
CACATTGTCTGACCCCTACTTTTGAAACGTGCAATGTGACCCGGAGCTTC
AAGCTGGAGATCAGGCTCGGCATTGAATTTGGTCGCTACAATTTTCCTCA
GGTCTCAGAATGCTACAAGGATAGCACTAGAGATGCCGCTCGCAAGCGGT
CGGCAACCCGTCAGCCACACCACCTCTTACGAAAGCTTCCACCGTCCAGT
GGGAATTTATACACTCCCGAGGAGATCAGATATTCTCTGGATGCTACCAT
CACATGGAATGGGCTCCTATACAGAAGTCACGAATCCCTCTTCCAACGAA
ATGAGCAAATATTCCCGCCCAGCAATTGCGTCGGTTGGTTGACATCGGCG
TCCGTTACAATTCCCCCGGGAGAACACTCGTTTCCATTTTGTATCATGAT
GGAAATTCAAATCGAACTCGACGAAAGGAAGCCGTTCTATACAAACGAAG
ACCGGGTTATCGGCCATGTCATCCTCCGCAATGATACCGAGGTTGACATC
GCCACTATAACAATTAGTCTATCCGGGCAGGCAATATCCAGGCTTGACTC
GGGAAAATTGACGGAATCACACAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Note | antiSMASH:Cluster_6.12 |
| DBxref | InterPro:IPR014756 |
| DBxref | InterPro:IPR011021 |
| DBxref | InterPro:IPR014752 |
| DBxref | PFAM:PF00339 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch6 | supercontig | ch6:1428772..1430048 - |
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