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KJC3_008270-T1, KJC3_008270-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008270-T1
Unique NameKJC3_008270-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1459294..1460176-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008270-T1 ID=KJC3_008270-T1|Name=KJC3_008270-T1|organism=Aspergillus niger KJC3|type=mRNA|length=883bp|location=Sequence derived from alignment at ch6:1459294..1460176- (Aspergillus niger KJC3)
ATGCACATGCCTTCCCTCTCAAACTGGGCCACAGCAGCCCTCCAGGCCCT
TCTTCTGTGTTCTTCCAATCTTCCTGTAGCTACCTCCTCACCATCTCCCC
CAGAACTATCATTTCTATACACAGCGTATGTCGAGTGCGAATCAAGTCTC
ATGAGCTCGCCGGGACCCCACGGGGTGCGACGTACAATCCCAATCGTGGG
CGGAAACTTCACCGGTCCTAATTTATCCGGTAGTTTACTTCCAGTCCCAG
CACTCTCACACCAAATGCATTACTCACTGACATCCCTTACCAGGAAAAAT
CCTCGACGTCGGCGCCGACTGGGGCCTAGTCGATCCTCAAACTGGCATCT
TCACTGCAGACACGCGATACAACTTCCGGACCGATGATGGCGAAAATATC
TTCCTCCAGACATCTGGTCCGAAGTCTCCTAGTGGACAGCTACATCTTCG
CCTAGTGTTTGAGACGGGAAGTCGAAAGTACTACTGGTTGAACAATGTTG
TTGGTATGTTGGGCTCTACAGTCTACAGCACAGGTCGGATTCTGATGGAT
GTGGTACGCTAATATCATGGATAGCTATTGGAATACTTACCAATGTGGCG
GAGACAGCTAATACCAGTCTTCTCAGGATTGATGCCTGGAATGTGAGTTG
AATTGGCTTGGTCCTGGTTATTTGTGTTGGAGCTGACGTGTGGTGAATGC
AGATGGCTACGGATTGGAATTCGACGAGTTTCGTAAACCCGACTACTACT
ACAACTGACTGAGACTCGGGATATAACGAAGTATTTTACGGGCTGTCTGG
CATAATTGTTGAAGCTGTTGGGGCGATTGATGAGCAAAGAAGTGAAGTAC
TGGTGCCATGGGTTTAGCTATATGTCAATTCGG
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Coding sequence (CDS) from alignment at ch6:1459294..1460176-

>KJC3_008270-T1 ID=KJC3_008270-T1|Name=KJC3_008270-T1|organism=Aspergillus niger KJC3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch6:1459294..1460176- (Aspergillus niger KJC3)
ATGGCTACGGATTGGAATTCGACGAGTTTCGTAAACCCGACTACTACTAC
AACTGACTGACTATTGGAATACTTACCAATGTGGCGGAGACAGCTAATAC
CAGTCTTCTCAGGATTGATGCCTGGAATGAAAAATCCTCGACGTCGGCGC
CGACTGGGGCCTAGTCGATCCTCAAACTGGCATCTTCACTGCAGACACGC
GATACAACTTCCGGACCGATGATGGCGAAAATATCTTCCTCCAGACATCT
GGTCCGAAGTCTCCTAGTGGACAGCTACATCTTCGCCTAGTGTTTGAGAC
GGGAAGTCGAAAGTACTACTGGTTGAACAATGTTGTTGATGCACATGCCT
TCCCTCTCAAACTGGGCCACAGCAGCCCTCCAGGCCCTTCTTCTGTGTTC
TTCCAATCTTCCTGTAGCTACCTCCTCACCATCTCCCCCAGAACTATCAT
TTCTATACACAGCGTATGTCGAGTGCGAATCAAGTCTCATGAGCTCGCCG
GGACCCCACGGGGTGCGACGTACAATCCCAATCGTGGGCGGAAACTTCAC
CGGTCCTAATTTATCCGATGGCTACGGATTGGAATTCGACGAGTTTCGTA
AACCCGACTACTACTACAACTGACTGACTATTGGAATACTTACCAATGTG
GCGGAGACAGCTAATACCAGTCTTCTCAGGATTGATGCCTGGAATGAAAA
ATCCTCGACGTCGGCGCCGACTGGGGCCTAGTCGATCCTCAAACTGGCAT
CTTCACTGCAGACACGCGATACAACTTCCGGACCGATGATGGCGAAAATA
TCTTCCTCCAGACATCTGGTCCGAAGTCTCCTAGTGGACAGCTACATCTT
CGCCTAGTGTTTGAGACGGGAAGTCGAAAGTACTACTGGTTGAACAATGT
TGTTGATGCACATGCCTTCCCTCTCAAACTGGGCCACAGCAGCCCTCCAG
GCCCTTCTTCTGTGTTCTTCCAATCTTCCTGTAGCTACCTCCTCACCATC
TCCCCCAGAACTATCATTTCTATACACAGCGTATGTCGAGTGCGAATCAA
GTCTCATGAGCTCGCCGGGACCCCACGGGGTGCGACGTACAATCCCAATC
GTGGGCGGAAACTTCACCGGTCCTAATTTATCCGATGGCTACGGATTGGA
ATTCGACGAGTTTCGTAAACCCGACTACTACTACAACTGACTGACTATTG
GAATACTTACCAATGTGGCGGAGACAGCTAATACCAGTCTTCTCAGGATT
GATGCCTGGAATGAAAAATCCTCGACGTCGGCGCCGACTGGGGCCTAGTC
GATCCTCAAACTGGCATCTTCACTGCAGACACGCGATACAACTTCCGGAC
CGATGATGGCGAAAATATCTTCCTCCAGACATCTGGTCCGAAGTCTCCTA
GTGGACAGCTACATCTTCGCCTAGTGTTTGAGACGGGAAGTCGAAAGTAC
TACTGGTTGAACAATGTTGTTGATGCACATGCCTTCCCTCTCAAACTGGG
CCACAGCAGCCCTCCAGGCCCTTCTTCTGTGTTCTTCCAATCTTCCTGTA
GCTACCTCCTCACCATCTCCCCCAGAACTATCATTTCTATACACAGCGTA
TGTCGAGTGCGAATCAAGTCTCATGAGCTCGCCGGGACCCCACGGGGTGC
GACGTACAATCCCAATCGTGGGCGGAAACTTCACCGGTCCTAATTTATCC
GATGGCTACGGATTGGAATTCGACGAGTTTCGTAAACCCGACTACTACTA
CAACTGACTGACTATTGGAATACTTACCAATGTGGCGGAGACAGCTAATA
CCAGTCTTCTCAGGATTGATGCCTGGAATGAAAAATCCTCGACGTCGGCG
CCGACTGGGGCCTAGTCGATCCTCAAACTGGCATCTTCACTGCAGACACG
CGATACAACTTCCGGACCGATGATGGCGAAAATATCTTCCTCCAGACATC
TGGTCCGAAGTCTCCTAGTGGACAGCTACATCTTCGCCTAGTGTTTGAGA
CGGGAAGTCGAAAGTACTACTGGTTGAACAATGTTGTTGATGCACATGCC
TTCCCTCTCAAACTGGGCCACAGCAGCCCTCCAGGCCCTTCTTCTGTGTT
CTTCCAATCTTCCTGTAGCTACCTCCTCACCATCTCCCCCAGAACTATCA
TTTCTATACACAGCGTATGTCGAGTGCGAATCAAGTCTCATGAGCTCGCC
GGGACCCCACGGGGTGCGACGTACAATCCCAATCGTGGGCGGAAACTTCA
CCGGTCCTAATTTATCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008270KJC3_008270Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008270-T1KJC3_008270-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008270-T1.cdsKJC3_008270-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008270-T1.utr3p1KJC3_008270-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008270-T1.exon4KJC3_008270-T1.exon4Aspergillus niger KJC3exon
KJC3_008270-T1.exon3KJC3_008270-T1.exon3Aspergillus niger KJC3exon
KJC3_008270-T1.exon2KJC3_008270-T1.exon2Aspergillus niger KJC3exon
KJC3_008270-T1.exon1KJC3_008270-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_6.12
NoteSECRETED:SignalP(1-29)
DBxrefPFAM:PF11578
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1459294..1460176 -
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