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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1471126..1472636+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008276-T1 ID=KJC3_008276-T1|Name=KJC3_008276-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1511bp|location=Sequence derived from alignment at ch6:1471126..1472636+ (Aspergillus niger KJC3)
ACGAGACTGTATCTGCAACACACTTGCTACAAGCGGAGCGAACCTGATTG
CTTCGGGTTTTGCGAGGTGCCCTGGTGCCGTGTCGAAATGAAGCCAAATC
CCGTGAATATTCCGGCTTCCGCTGAGTAAGCAATCCTATACAATTATGTT
TCCCCCATAGTTTTGTCGTATATATTGAATCGCCAGGTACATTCTCTTCA
TATAACATACACCTCAAGTCCTTCGTACTGCTCTCCTAACTTTATCCATT
CATTTTCACCTCCTCATTTCTTTCGGTACCTCGAGATGTCTACCTGGCGC
CCCGGCAAACGGGTAGCCATCGCAGGCGGTGGTCCGGGCGCCATATCCAC
AGCGCTGGCTTTCATCAAACATGGCTATGACGTGCGGGTATTCGAGCGCC
AGACTGAATGTCGCGCTCTCGGAGGCGCAGTCCTCCTCTCTATTCCTGTG
CTTGCAATCTTGCGTTCCTATGGAATCAGCCTCGAGAACTTCGGATCTTA
TACGTCGACCTACTTCAAGAACAAGTGGGGCAAGGAACGGGCCCTGCTGC
CATTTAATGCCGAAGTCGAAAGACGGATGGGAATCAAGGGCTGGCAGTAT
GGCGTCTTGCGATCATCCGCTTTTCAGAAAATGCTCGACCTCGTCCCGGA
GGGCGTCATTTTCTGTAACCACGAAGTGACGGGATACGAGGAAGTTGAGG
GTGGGGTGGAAGTCAAGTTCAAGGATAGCAACACCGCACCAGTAACGGCC
AATATACTGATCGCAGGGGATGGCATTCGATCTGCCGTTTCGCGTCAGGC
ATTCGGTGATCCCCCGTTATTCCACACGGGCATCCGGCTCTGGCTCGCGT
GGTGTGATCACATCCCTGGGATACCTGCCAACACTGGTGTCATCTCGCAT
GACTGGCAATATCAGGCTAGCTTCTTCCCTATGCTCCATGATGGGAGACC
AGGGTTCGAGTGGTGGGTTGTCGAGCCAGCCTGGGAAGGAAAGCAGCTCC
CCGACGATCCCAGGGCCCATGTAGAGAAAATCCTGCAGGGCTGGTCGGAT
CCCATGCCGCAGCTGGTGGAGGCTACTAATTTCGATACGCAGGTGTATCG
ATGGGATATCTACAATCGGCCGTCGATGAAGAAGTGGTCTACTGGGAGGA
TTGTGGGTATCGGGGATGCGGTGCACCCTGTTTCGCCGTATGCGGCGTAC
GGAATGGGTATGGCCATCGAGGATGGGTATTTCCTTGCGAAGGCGCTGGA
TGGAGTTGATTTGAGGGATGTGGAGGCTGTCAATGCAGGATTTGAGCTGT
TCGAGGAGCAGCGCGTCGATTATGTGAATCATCATATGGAGTTCGCTCGG
TTTACGAGTAATATGTTCCATAGCTTACCTTGGCCGTTAGCAAGGCTAAG
GGACTTGGTGTTTGATTATACGCCGTTTTTGAAGGGGTTACTGCAGAAGG
AGTATTTGAAGAGGGCGGAGGATGAGACGATGAATCTCAAGGAGTTTCAT
GTTGTTTAGGC back to topCoding sequence (CDS) from alignment at ch6:1471126..1472636+ >KJC3_008276-T1 ID=KJC3_008276-T1|Name=KJC3_008276-T1|organism=Aspergillus niger KJC3|type=CDS|length=1224bp|location=Sequence derived from alignment at ch6:1471126..1472636+ (Aspergillus niger KJC3)
ATGTCTACCTGGCGCCCCGGCAAACGGGTAGCCATCGCAGGCGGTGGTCC
GGGCGCCATATCCACAGCGCTGGCTTTCATCAAACATGGCTATGACGTGC
GGGTATTCGAGCGCCAGACTGAATGTCGCGCTCTCGGAGGCGCAGTCCTC
CTCTCTATTCCTGTGCTTGCAATCTTGCGTTCCTATGGAATCAGCCTCGA
GAACTTCGGATCTTATACGTCGACCTACTTCAAGAACAAGTGGGGCAAGG
AACGGGCCCTGCTGCCATTTAATGCCGAAGTCGAAAGACGGATGGGAATC
AAGGGCTGGCAGTATGGCGTCTTGCGATCATCCGCTTTTCAGAAAATGCT
CGACCTCGTCCCGGAGGGCGTCATTTTCTGTAACCACGAAGTGACGGGAT
ACGAGGAAGTTGAGGGTGGGGTGGAAGTCAAGTTCAAGGATAGCAACACC
GCACCAGTAACGGCCAATATACTGATCGCAGGGGATGGCATTCGATCTGC
CGTTTCGCGTCAGGCATTCGGTGATCCCCCGTTATTCCACACGGGCATCC
GGCTCTGGCTCGCGTGGTGTGATCACATCCCTGGGATACCTGCCAACACT
GGTGTCATCTCGCATGACTGGCAATATCAGGCTAGCTTCTTCCCTATGCT
CCATGATGGGAGACCAGGGTTCGAGTGGTGGGTTGTCGAGCCAGCCTGGG
AAGGAAAGCAGCTCCCCGACGATCCCAGGGCCCATGTAGAGAAAATCCTG
CAGGGCTGGTCGGATCCCATGCCGCAGCTGGTGGAGGCTACTAATTTCGA
TACGCAGGTGTATCGATGGGATATCTACAATCGGCCGTCGATGAAGAAGT
GGTCTACTGGGAGGATTGTGGGTATCGGGGATGCGGTGCACCCTGTTTCG
CCGTATGCGGCGTACGGAATGGGTATGGCCATCGAGGATGGGTATTTCCT
TGCGAAGGCGCTGGATGGAGTTGATTTGAGGGATGTGGAGGCTGTCAATG
CAGGATTTGAGCTGTTCGAGGAGCAGCGCGTCGATTATGTGAATCATCAT
ATGGAGTTCGCTCGGTTTACGAGTAATATGTTCCATAGCTTACCTTGGCC
GTTAGCAAGGCTAAGGGACTTGGTGTTTGATTATACGCCGTTTTTGAAGG
GGTTACTGCAGAAGGAGTATTTGAAGAGGGCGGAGGATGAGACGATGAAT
CTCAAGGAGTTTCATGTTGTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008276-T1.utr5p1 | KJC3_008276-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008276-T1.utr3p1 | KJC3_008276-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002938 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1471126..1472636 + |
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