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KJC3_008277-T1, KJC3_008277-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008277-T1
Unique NameKJC3_008277-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1473237..1475197+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008277-T1 ID=KJC3_008277-T1|Name=KJC3_008277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1961bp|location=Sequence derived from alignment at ch6:1473237..1475197+ (Aspergillus niger KJC3)
GTGCGTGCCTTTCGCTTCGCGGAAGTTCAAACTCTGCTATACATCCATCT
GATCACCAGAGCATCGGCTGATGAAGACCTGTCCGATGGTTACCCTTCTG
CTCTGCTCACCCTAATTCACATGCTGTGAGCATTGTCGCTAGATTCGCAG
CATGGTTTCCGTTAGAGAATACACTATAACACCTGGCTGGGCGATCTACT
GAAGTTACTCTATTGCGCTTCCCAATACACATGACCGCCGATCGAACTTC
CGAGGAAGTCTCAGCTAAAGGTGATTCAACCCAGTCAACCCCCGAGCTAG
GAACTCGAGTTAACTCCGTTGACCACTCAGACTGCCGGGTCTGCAGAACC
CGTCGTATCTCCTGTGATAGAACGCTGCCCCATTGTCGAAAGTGCTTTTC
ACGAAATCTTCGCTGTCCCGGTTATGGGATCAACCTAAGATGGGGTCAAG
GAGTGGCAAGCAGGGGTAAATTGACGGGACAGGCAATACCAGTCCGAAAG
GACCCCCAGATATCACAGAAGGCCTTATATCGCCGAGCAGGCGTCGCCGT
GCCCGATGTGGACCTCCAACTACTGGCCCGTTGGCCCAGTTCACCCTTCG
ACAGCCTCACTACTCAGTTGCTCGATCACTTCGATCGAGGCGTCGCTACA
AGGCTTGCGTGGGTGGATGACCTTCACAATCCCTGGAGAAGCTTAGTGTT
ACCTCTATCGCACGACTCATCAACTGTACGATATTCGGTGCTTGCTCTCG
CTTCGAAGGACCTTGCGGCCAAGTACCCAACAGACCATCATTGGGCGCAG
AGACTTGAAGCCATTTCCCGTCACCAGCAGAATGTGGCCCTGTCTTGGTT
GTCGAGGGATATGCGAGACATACTGCAGGATCCAACCGCGGTTCAAACCA
GAGACCAAGCGAGACATATCCTAGCTTCCGCTCTCATTCTGTACAATGTT
GAACTACTAACAGCACCGGCTGCTCAATGGCGAATACACATACAATGTGC
CCGCGAAATTGTCCAGTGGAATATGCAATCTGCTAGCAGTGCACTGTATA
CAAATATCGCTGATGTATTCCTGTTCTACGAGTACTACTACACGTCAGTC
TACATCGGGCTAACGACATTCGATCCGGTCGATCAGCTCCAAGACGACTT
CCCGACGCATGACAATGTCACAGTGTTCAGTGATTTCATCCGAATCATGC
ATAGCGTGACGCGTGCCGAGCGACAAACTTATACTATGCAGTCCATCTCG
CAACCCGTCCCAATCGAATCCACACTGCTGGACATAGAATTTGCCAAAGC
TCGGATGATGCAGATGAGCTACACAATCAAGTTCAAAACTGTCCAGGCAC
GGCATGATTTCGAATGCCTAGTACACATGTTCTATCATGCCACGCTTATC
TATACCCACCGTGTCTTTTCCGACAGTGTATCCCCGGATGAGTACATACA
AGCTTCGCTTGGTGTGCTTCTCGAACACGCACTGCCCCTCTCGTGCAGCG
CCGCGGTTGCTCAGGACCTTGTCTGGCCACTCTTCATCACAGGGACAGAG
TCTAGGGGCAACCCACAGATGCAGAACATTGTCGAGGAGGCCATGATGAA
TGTGATTCGATTGAGTGGTAGTCTTGATCGGAGCCGCGTTCTTTCATTCC
TCAAGACCTTCTGGTCATTGGAACTGGAGCCGGGTACTACATGGATTCAG
TATGCCCGAGCCAAGTGTATCGACTTCAGCTTCTTAGTAATTCTTTGAAA
ATATTTCAGACTTGTTCAATGCTCTTCCTGTACTATATACACCATGATCG
CAATATTAGCAGGGGCGAATAATGCCCCTAGCACTGGCGTAGTTGACTGA
GGCGGAGTAGCTTCTCTCGGCAAGTAGCGTTATCGAAAGACAGGACTTGA
CCGCTGGCAACACTCCTCCCCCACCCCCATCGCCATCTACGGACCGAACA
CTTTAACAGAG
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Coding sequence (CDS) from alignment at ch6:1473237..1475197+

>KJC3_008277-T1 ID=KJC3_008277-T1|Name=KJC3_008277-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch6:1473237..1475197+ (Aspergillus niger KJC3)
ATGACCGCCGATCGAACTTCCGAGGAAGTCTCAGCTAAAGACTGCCGGGT
CTGCAGAACCCGTCGTATCTCCTGTGATAGAACGCTGCCCCATTGTCGAA
AGTGCTTTTCACGAAATCTTCGCTGTCCCGGTTATGGGATCAACCTAAGA
TGGGGTCAAGGAGTGGCAAGCAGGGGTAAATTGACGGGACAGGCAATACC
AGTCCGAAAGGACCCCCAGATATCACAGAAGGCCTTATATCGCCGAGCAG
GCGTCGCCGTGCCCGATGTGGACCTCCAACTACTGGCCCGTTGGCCCAGT
TCACCCTTCGACAGCCTCACTACTCAGTTGCTCGATCACTTCGATCGAGG
CGTCGCTACAAGGCTTGCGTGGGTGGATGACCTTCACAATCCCTGGAGAA
GCTTAGTGTTACCTCTATCGCACGACTCATCAACTGTACGATATTCGGTG
CTTGCTCTCGCTTCGAAGGACCTTGCGGCCAAGTACCCAACAGACCATCA
TTGGGCGCAGAGACTTGAAGCCATTTCCCGTCACCAGCAGAATGTGGCCC
TGTCTTGGTTGTCGAGGGATATGCGAGACATACTGCAGGATCCAACCGCG
GTTCAAACCAGAGACCAAGCGAGACATATCCTAGCTTCCGCTCTCATTCT
GTACAATGTTGAACTACTAACAGCACCGGCTGCTCAATGGCGAATACACA
TACAATGTGCCCGCGAAATTGTCCAGTGGAATATGCAATCTGCTAGCAGT
GCACTGTATACAAATATCGCTGATGTATTCCTGTTCTACGAGTACTACTA
CACGTCAGTCTACATCGGGCTAACGACATTCGATCCGGTCGATCAGCTCC
AAGACGACTTCCCGACGCATGACAATGTCACAGTGTTCAGTGATTTCATC
CGAATCATGCATAGCGTGACGCGTGCCGAGCGACAAACTTATACTATGCA
GTCCATCTCGCAACCCGTCCCAATCGAATCCACACTGCTGGACATAGAAT
TTGCCAAAGCTCGGATGATGCAGATGAGCTACACAATCAAGTTCAAAACT
GTCCAGGCACGGCATGATTTCGAATGCCTAGTACACATGTTCTATCATGC
CACGCTTATCTATACCCACCGTGTCTTTTCCGACAGTGTATCCCCGGATG
AGTACATACAAGCTTCGCTTGGTGTGCTTCTCGAACACGCACTGCCCCTC
TCGTGCAGCGCCGCGGTTGCTCAGGACCTTGTCTGGCCACTCTTCATCAC
AGGGACAGAGTCTAGGGGCAACCCACAGATGCAGAACATTGTCGAGGAGG
CCATGATGAATGTGATTCGATTGAGTGGTAGTCTTGATCGGAGCCGCGTT
CTTTCATTCCTCAAGACCTTCTGGTCATTGGAACTGGAGCCGGGTACTAC
ATGGATTCAGTATGCCCGAGCCAAGTGTATCGACTTCAGCTTCTTAGTAA
TTCTTTGAATGACCGCCGATCGAACTTCCGAGGAAGTCTCAGCTAAAGAC
TGCCGGGTCTGCAGAACCCGTCGTATCTCCTGTGATAGAACGCTGCCCCA
TTGTCGAAAGTGCTTTTCACGAAATCTTCGCTGTCCCGGTTATGGGATCA
ACCTAAGATGGGGTCAAGGAGTGGCAAGCAGGGGTAAATTGACGGGACAG
GCAATACCAGTCCGAAAGGACCCCCAGATATCACAGAAGGCCTTATATCG
CCGAGCAGGCGTCGCCGTGCCCGATGTGGACCTCCAACTACTGGCCCGTT
GGCCCAGTTCACCCTTCGACAGCCTCACTACTCAGTTGCTCGATCACTTC
GATCGAGGCGTCGCTACAAGGCTTGCGTGGGTGGATGACCTTCACAATCC
CTGGAGAAGCTTAGTGTTACCTCTATCGCACGACTCATCAACTGTACGAT
ATTCGGTGCTTGCTCTCGCTTCGAAGGACCTTGCGGCCAAGTACCCAACA
GACCATCATTGGGCGCAGAGACTTGAAGCCATTTCCCGTCACCAGCAGAA
TGTGGCCCTGTCTTGGTTGTCGAGGGATATGCGAGACATACTGCAGGATC
CAACCGCGGTTCAAACCAGAGACCAAGCGAGACATATCCTAGCTTCCGCT
CTCATTCTGTACAATGTTGAACTACTAACAGCACCGGCTGCTCAATGGCG
AATACACATACAATGTGCCCGCGAAATTGTCCAGTGGAATATGCAATCTG
CTAGCAGTGCACTGTATACAAATATCGCTGATGTATTCCTGTTCTACGAG
TACTACTACACGTCAGTCTACATCGGGCTAACGACATTCGATCCGGTCGA
TCAGCTCCAAGACGACTTCCCGACGCATGACAATGTCACAGTGTTCAGTG
ATTTCATCCGAATCATGCATAGCGTGACGCGTGCCGAGCGACAAACTTAT
ACTATGCAGTCCATCTCGCAACCCGTCCCAATCGAATCCACACTGCTGGA
CATAGAATTTGCCAAAGCTCGGATGATGCAGATGAGCTACACAATCAAGT
TCAAAACTGTCCAGGCACGGCATGATTTCGAATGCCTAGTACACATGTTC
TATCATGCCACGCTTATCTATACCCACCGTGTCTTTTCCGACAGTGTATC
CCCGGATGAGTACATACAAGCTTCGCTTGGTGTGCTTCTCGAACACGCAC
TGCCCCTCTCGTGCAGCGCCGCGGTTGCTCAGGACCTTGTCTGGCCACTC
TTCATCACAGGGACAGAGTCTAGGGGCAACCCACAGATGCAGAACATTGT
CGAGGAGGCCATGATGAATGTGATTCGATTGAGTGGTAGTCTTGATCGGA
GCCGCGTTCTTTCATTCCTCAAGACCTTCTGGTCATTGGAACTGGAGCCG
GGTACTACATGGATTCAGTATGCCCGAGCCAAGTGTATCGACTTCAGCTT
CTTAGTAATTCTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008277KJC3_008277Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008277-T1.utr5p1KJC3_008277-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008277-T1.exon1KJC3_008277-T1.exon1Aspergillus niger KJC3exon
KJC3_008277-T1.exon2KJC3_008277-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008277-T1.cdsKJC3_008277-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008277-T1.utr3p1KJC3_008277-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008277-T1KJC3_008277-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR021858
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1473237..1475197 +
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