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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1489492..1491306- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008282-T1 ID=KJC3_008282-T1|Name=KJC3_008282-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1815bp|location=Sequence derived from alignment at ch6:1489492..1491306- (Aspergillus niger KJC3)
GAGCACTTGAAACGAAGGGGTGAAAAATGGAACTGTATATAGAGTTACTC
CCAGCCCGATCCGAGAGCCTATGACCCATAGCGGTACAGATCATGGCCAT
CATGAAGGCCCTCCTTTGGCTCTCCCTTTCCCTCGCCGTCTGGGCGACTC
CAGTTCAACGGGATGCAGCTCCTACTGTCACTATTGCGCATCCATCGGCC
ACCGTCATTGGAAAATCTGGCAATGTCGAGAGCTTCAACAATATTCCCTT
TGCGCAGGCCCCCACAGGCTCGCTGCGTCTGAAGCCCCCACAACCCTTGG
AAACTGCCCTCGGCACTGTTCAGGCCACAGGAGCCTCGCAATCGTGTCCG
CAGATGTACTTCACCACGGATGAGAGCGAATTCCCGACATCGGTCATTGG
CCTCCTCGCTGATCTCCCTTTGGTACAGTCGGCTACCAATGCTCTCGAGG
ATTGCCTGAACATTGACATTCGGCGTCCGGCCGGGACCACCGCGGACTCG
AAGCTGCCTGTGCTGGTCTGGATCTTTGGCGGAGGCTTTGAACTTGGTTC
AAAGGCGATGTATGATGGTACAGCGATGGTATCATCGTCGATAGACAAGA
ACATGCCTATCGTGTTTGTAGCAATGAATTATCGCGTGGGAGGTTTCGGG
TTCTTGCCCGGAAAGGAGATCCTGGAGGACGGGTCCGCGAACCTAGGGCT
CCTGGACCAACGCCTTGCCCTGCAGTGGGTTGCCGACAACATCGAGGCCT
TTGGTGGAGACCCGGACAAGGTGACGATTTGGGGAGAATCAGCAGGAGCC
ATTTCCGTTTTTGATCAGATGATCTTGTACGACGGAAACATCACTTACAA
GGATAAGCCCTTGTTCCGGGGGGCCATCATGGACTCCGGTAGTGTTGTTC
CCGCAGACCCCGTCGATGGGGTCAAGGGACAGCAAGTATATGATGCGGTA
GTGGAATCTGCAGGCTGTTCCTCTTCTAACGACACCCTAGCTTGTCTGCG
TGAACTAGACTACACCGACTTCCTCAATGCGGCAAACTCCGTGCCAGGCA
TTTTAAGCTACCATTCTGTGGCGTTATCATATGTGCCTCGACCGGACGGG
ACGGCGTTGTCGGCATCACCGGACGTTTTGGGCAAAGCAGGGAAATATGC
TCGGGTCCCGTTCATCGTGGGCGACCAAGAGGATGAGGGGACCTTATTCG
CCTTGTTTCAGTCCAACATTACGACGATCGACGAGGTGGTCGACTACCTG
GCCTCATACTTCTTCTATGACGCTAGCCGAGAGCAGCTTGAAGAACTAGT
GGCCCTGTACCCAGACACCACCACGTACGGGTCTCCGTTCAGGACAGGCG
CGGCCAACAACTGGTATCCGCAATTTAAGCGATTGGCCGCCATTCTCGGC
GACTTGGTCTTCACCATTACCCGGCGGGCATTCCTCTCGTATGCAGAGGA
AATCTCCCCTGATCTTCCGAACTGGTCGTACCTGGCGACCTATGACTATG
GCACCCCAGTTCTGGGGACCTTCCACGGAAGTGACCTGCTGCAGGTGTTC
TATGGGATCAAGCCAAACTATGCAGCTAGTTCTAGCCACACGTACTATCT
GAGCTTTGTGTATACGCTGGATCCGAACTCCAACCGGGGGGAGTACATTG
AGTGGCCGCAGTGGAAGGAATCGCGGCAGTTGATGAATTTCGGAGCGAAC
GACGCCAGTCTCCTTACGGATGATTTCCGCAACGGGACATATGAGTTCAT
CCTGCAGAATACCGCGGCGTTCCACATCTGATGCCATTGGCGGAGGGGTC
CGGACGGTCAGGAAC back to topCoding sequence (CDS) from alignment at ch6:1489492..1491306- >KJC3_008282-T1 ID=KJC3_008282-T1|Name=KJC3_008282-T1|organism=Aspergillus niger KJC3|type=CDS|length=1689bp|location=Sequence derived from alignment at ch6:1489492..1491306- (Aspergillus niger KJC3)
ATGGCCATCATGAAGGCCCTCCTTTGGCTCTCCCTTTCCCTCGCCGTCTG
GGCGACTCCAGTTCAACGGGATGCAGCTCCTACTGTCACTATTGCGCATC
CATCGGCCACCGTCATTGGAAAATCTGGCAATGTCGAGAGCTTCAACAAT
ATTCCCTTTGCGCAGGCCCCCACAGGCTCGCTGCGTCTGAAGCCCCCACA
ACCCTTGGAAACTGCCCTCGGCACTGTTCAGGCCACAGGAGCCTCGCAAT
CGTGTCCGCAGATGTACTTCACCACGGATGAGAGCGAATTCCCGACATCG
GTCATTGGCCTCCTCGCTGATCTCCCTTTGGTACAGTCGGCTACCAATGC
TCTCGAGGATTGCCTGAACATTGACATTCGGCGTCCGGCCGGGACCACCG
CGGACTCGAAGCTGCCTGTGCTGGTCTGGATCTTTGGCGGAGGCTTTGAA
CTTGGTTCAAAGGCGATGTATGATGGTACAGCGATGGTATCATCGTCGAT
AGACAAGAACATGCCTATCGTGTTTGTAGCAATGAATTATCGCGTGGGAG
GTTTCGGGTTCTTGCCCGGAAAGGAGATCCTGGAGGACGGGTCCGCGAAC
CTAGGGCTCCTGGACCAACGCCTTGCCCTGCAGTGGGTTGCCGACAACAT
CGAGGCCTTTGGTGGAGACCCGGACAAGGTGACGATTTGGGGAGAATCAG
CAGGAGCCATTTCCGTTTTTGATCAGATGATCTTGTACGACGGAAACATC
ACTTACAAGGATAAGCCCTTGTTCCGGGGGGCCATCATGGACTCCGGTAG
TGTTGTTCCCGCAGACCCCGTCGATGGGGTCAAGGGACAGCAAGTATATG
ATGCGGTAGTGGAATCTGCAGGCTGTTCCTCTTCTAACGACACCCTAGCT
TGTCTGCGTGAACTAGACTACACCGACTTCCTCAATGCGGCAAACTCCGT
GCCAGGCATTTTAAGCTACCATTCTGTGGCGTTATCATATGTGCCTCGAC
CGGACGGGACGGCGTTGTCGGCATCACCGGACGTTTTGGGCAAAGCAGGG
AAATATGCTCGGGTCCCGTTCATCGTGGGCGACCAAGAGGATGAGGGGAC
CTTATTCGCCTTGTTTCAGTCCAACATTACGACGATCGACGAGGTGGTCG
ACTACCTGGCCTCATACTTCTTCTATGACGCTAGCCGAGAGCAGCTTGAA
GAACTAGTGGCCCTGTACCCAGACACCACCACGTACGGGTCTCCGTTCAG
GACAGGCGCGGCCAACAACTGGTATCCGCAATTTAAGCGATTGGCCGCCA
TTCTCGGCGACTTGGTCTTCACCATTACCCGGCGGGCATTCCTCTCGTAT
GCAGAGGAAATCTCCCCTGATCTTCCGAACTGGTCGTACCTGGCGACCTA
TGACTATGGCACCCCAGTTCTGGGGACCTTCCACGGAAGTGACCTGCTGC
AGGTGTTCTATGGGATCAAGCCAAACTATGCAGCTAGTTCTAGCCACACG
TACTATCTGAGCTTTGTGTATACGCTGGATCCGAACTCCAACCGGGGGGA
GTACATTGAGTGGCCGCAGTGGAAGGAATCGCGGCAGTTGATGAATTTCG
GAGCGAACGACGCCAGTCTCCTTACGGATGATTTCCGCAACGGGACATAT
GAGTTCATCCTGCAGAATACCGCGGCGTTCCACATCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008282-T1.utr3p1 | KJC3_008282-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008282-T1.utr5p1 | KJC3_008282-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | MEROPS:MER0033188 |
| DBxref | InterPro:IPR019826 |
| DBxref | InterPro:IPR002018 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1489492..1491306 - |
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