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KJC3_008286-T1, KJC3_008286-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008286-T1
Unique NameKJC3_008286-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1498718..1499573+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008286-T1 ID=KJC3_008286-T1|Name=KJC3_008286-T1|organism=Aspergillus niger KJC3|type=mRNA|length=856bp|location=Sequence derived from alignment at ch6:1498718..1499573+ (Aspergillus niger KJC3)
ATGTCATCTTCAAGCGTGGATGTTAGGCCACAGGGGCCAACTAAAGTCGT
TTCAGAGTAAGTACGACTCGTATCCTTATCGACAGCATCTCACGTCCACT
AGCCTCTTCTTAAGCTCTACATGGAGCGACTTAACCATCGTTTGCGGGGA
TGTTGTGTTCCCAGCCCATAAATGCGTCGTGTGCCCTCAATCTGGGTACT
TTTCTCGCGCGTGCAATAGCAGCTTCATTGTAAGTTTCTGCCGTTTTTCG
ATTCTAGAATAATGAGAACGCAAGTAACACATGCACGTCCTAACTCAGGA
ATCCTCCGGAAAGATTGTGATAGAGGAGCTTGAGCCCATTTATCTTGAAA
AGACCCTACAGTTTCTCTACAAAGGAGATTACACCAGACTGAGCGATATA
GACACCTCTCCTACAGTGGAGTTTGGCCATCCCAGCCCCATCCCCAGTCC
GATCGTTCGAAGCTTCCCACATACTACCTTGTCATCTGGGGCAAATGGTG
GACTTTCGAAATTTCATGTCCATATGTACGAGCAAGGAGAATATTTCCAG
ATCCAGGACCTCAAAGAAAAGGCAAAAGAGCATTTCAAAGAGTGTTTCTT
GCGTGACCTTGACAGACTGTTCTTCCGTTCAACTGTGAATGAAGTCTACT
GTTCAACGATTGAGACGGATCGCGGGCTTCGAGACATCGTGATCGAGACC
GTTCTAAATGATCTGCCCACGTTAATCAATGGAACCTCAACGTATATCGA
CAAGGAGGATCTGCAAGAGATACCCGAATTTACAGTTGACCTGTGCATGG
CAAGCCTTGCTCAGAATGTGTGCCTCATGAGCGTCATCTCAGAATGGAAA
GGATGA
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Coding sequence (CDS) from alignment at ch6:1498718..1499573+

>KJC3_008286-T1 ID=KJC3_008286-T1|Name=KJC3_008286-T1|organism=Aspergillus niger KJC3|type=CDS|length=2223bp|location=Sequence derived from alignment at ch6:1498718..1499573+ (Aspergillus niger KJC3)
ATGTCATCTTCAAGCGTGGATGTTAGGCCACAGGGGCCAACTAAAGTCGT
TTCAGACCTCTTCTTAAGCTCTACATGGAGCGACTTAACCATCGTTTGCG
GGGATGTTGTGTTCCCAGCCCATAAATGCGTCGTGTGCCCTCAATCTGGG
TACTTTTCTCGCGCGTGCAATAGCAGCTTCATTGAATCCTCCGGAAAGAT
TGTGATAGAGGAGCTTGAGCCCATTTATCTTGAAAAGACCCTACAGTTTC
TCTACAAAGGAGATTACACCAGACTGAGCGATATAGACACCTCTCCTACA
GTGGAGTTTGGCCATCCCAGCCCCATCCCCAGTCCGATCGTTCGAAGCTT
CCCACATACTACCTTGTCATCTGGGGCAAATGGTGGACTTTCGAAATTTC
ATGTCCATATGTACGAGCAAGGAGAATATTTCCAGATCCAGGACCTCAAA
GAAAAGGCAAAAGAGCATTTCAAAGAGTGTTTCTTGCGTGACCTTGACAG
ACTGTTCTTCCGTTCAACTGTGAATGAAGTCTACTGTTCAACGATTGAGA
CGGATCGCGGGCTTCGAGACATCGTGATCGAGACCGTTCTAAATGATCTG
CCCACGTTAATCAATGGAACCTCAACGTATATCGACAAGGAGGATCTGCA
AGAGATACCCGAATTTACAGTTGACCTGTGCATGGCAAGCCTTGCTCAGA
ATGTGTGCCTCATGAGCGTCATCTCAGAATGGAAAGGATGAATGTCATCT
TCAAGCGTGGATGTTAGGCCACAGGGGCCAACTAAAGTCGTTTCAGACCT
CTTCTTAAGCTCTACATGGAGCGACTTAACCATCGTTTGCGGGGATGTTG
TGTTCCCAGCCCATAAATGCGTCGTGTGCCCTCAATCTGGGTACTTTTCT
CGCGCGTGCAATAGCAGCTTCATTGAATCCTCCGGAAAGATTGTGATAGA
GGAGCTTGAGCCCATTTATCTTGAAAAGACCCTACAGTTTCTCTACAAAG
GAGATTACACCAGACTGAGCGATATAGACACCTCTCCTACAGTGGAGTTT
GGCCATCCCAGCCCCATCCCCAGTCCGATCGTTCGAAGCTTCCCACATAC
TACCTTGTCATCTGGGGCAAATGGTGGACTTTCGAAATTTCATGTCCATA
TGTACGAGCAAGGAGAATATTTCCAGATCCAGGACCTCAAAGAAAAGGCA
AAAGAGCATTTCAAAGAGTGTTTCTTGCGTGACCTTGACAGACTGTTCTT
CCGTTCAACTGTGAATGAAGTCTACTGTTCAACGATTGAGACGGATCGCG
GGCTTCGAGACATCGTGATCGAGACCGTTCTAAATGATCTGCCCACGTTA
ATCAATGGAACCTCAACGTATATCGACAAGGAGGATCTGCAAGAGATACC
CGAATTTACAGTTGACCTGTGCATGGCAAGCCTTGCTCAGAATGTGTGCC
TCATGAGCGTCATCTCAGAATGGAAAGGATGAATGTCATCTTCAAGCGTG
GATGTTAGGCCACAGGGGCCAACTAAAGTCGTTTCAGACCTCTTCTTAAG
CTCTACATGGAGCGACTTAACCATCGTTTGCGGGGATGTTGTGTTCCCAG
CCCATAAATGCGTCGTGTGCCCTCAATCTGGGTACTTTTCTCGCGCGTGC
AATAGCAGCTTCATTGAATCCTCCGGAAAGATTGTGATAGAGGAGCTTGA
GCCCATTTATCTTGAAAAGACCCTACAGTTTCTCTACAAAGGAGATTACA
CCAGACTGAGCGATATAGACACCTCTCCTACAGTGGAGTTTGGCCATCCC
AGCCCCATCCCCAGTCCGATCGTTCGAAGCTTCCCACATACTACCTTGTC
ATCTGGGGCAAATGGTGGACTTTCGAAATTTCATGTCCATATGTACGAGC
AAGGAGAATATTTCCAGATCCAGGACCTCAAAGAAAAGGCAAAAGAGCAT
TTCAAAGAGTGTTTCTTGCGTGACCTTGACAGACTGTTCTTCCGTTCAAC
TGTGAATGAAGTCTACTGTTCAACGATTGAGACGGATCGCGGGCTTCGAG
ACATCGTGATCGAGACCGTTCTAAATGATCTGCCCACGTTAATCAATGGA
ACCTCAACGTATATCGACAAGGAGGATCTGCAAGAGATACCCGAATTTAC
AGTTGACCTGTGCATGGCAAGCCTTGCTCAGAATGTGTGCCTCATGAGCG
TCATCTCAGAATGGAAAGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008286KJC3_008286Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008286-T1.exon1KJC3_008286-T1.exon1Aspergillus niger KJC3exon
KJC3_008286-T1.exon2KJC3_008286-T1.exon2Aspergillus niger KJC3exon
KJC3_008286-T1.exon3KJC3_008286-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008286-T1.cdsKJC3_008286-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008286-T1KJC3_008286-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR000210
DBxrefPFAM:PF00651
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1498718..1499573 +
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