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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1502038..1503016+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008288-T1 ID=KJC3_008288-T1|Name=KJC3_008288-T1|organism=Aspergillus niger KJC3|type=mRNA|length=979bp|location=Sequence derived from alignment at ch6:1502038..1503016+ (Aspergillus niger KJC3)
CTTCAATTCAAGCAGGATAATCTTCCAAAGAAACATTACTCAAAGAAGAT
GTTCTACCAACCCGGCAAAACCGACCACGGCCTGCCCCATGATCCATTCA
AGGTGATTAGTTGATTCCCCAACAACAACTCCAATTGACCGATGATTCAT
TCAATGATCTACCCCGCATATCTACTTCCCCCCTCACCATCACCTTAACC
TCGCACATTACACACCAGCACCAGCACCAGCACCACGCCACAATCTCCCT
CAAACTCAATCTCAAACACTAATAGTACTGACCCAAAAAAAAAAAAAAAA
AAAAAAAAAGGCATGCGTCGTCCCCCGCCCAATCGGCTGGATAAGCACAA
CTTCTCCCACCGGCACCCCCAACCTCGCCCCCTACAGCCAATTTACAAAC
CTAACCTTCGACCCACCCTACGTTCTCTTCAGCAGCAATCAGACTGTGTC
AGGAGACCGAAAAGACACTGTCGTGAACGCCGAATCTACCGGCTCCTTTG
TGTGGAACCTTGCGACCTATGACCTGCGCGAAGCGATGAATATCACGGCG
CAGCAGTTTCCTTACGGAGTGAATGAGTTCGAGAAGGCCGGGCTGACCGC
GGAACCATCTACTGTTCTTCCGGTGCAGGTGCCGATGGTGAAGGAGTCGC
CGGTGCGGTTCGAGTGCGTGTATCATTCTACAATGAGACTGCCCGGAAAT
CCGCCCATGGGGACGGTGGATGTTGTGGTGGGGCGAGTGGTGGGCGTACA
TATTGATGAAAGGGTGCTTACGGATGGAATTCTGGATGTAAGAAAGACGA
AGCCGATTGCTAGGTGTGGGTATTTTCAGTATGCGGTGGTTGAGGATACG
TTTGAGATGGTTATTCCCGGGATGTCGGCGGATGTGCTATATGGGCTAGA
GGGGAGTGCCAAGATGAATGGGGAGAAGGCGAGGGAAATTAAAGAGGGGG
AGGGGAAGAAGGACCAGGCGCTGTTGTAG back to topCoding sequence (CDS) from alignment at ch6:1502038..1503016+ >KJC3_008288-T1 ID=KJC3_008288-T1|Name=KJC3_008288-T1|organism=Aspergillus niger KJC3|type=CDS|length=1446bp|location=Sequence derived from alignment at ch6:1502038..1503016+ (Aspergillus niger KJC3)
ATGTTCTACCAACCCGGCAAAACCGACCACGGCCTGCCCCATGATCCATT
CAAGGCATGCGTCGTCCCCCGCCCAATCGGCTGGATAAGCACAACTTCTC
CCACCGGCACCCCCAACCTCGCCCCCTACAGCCAATTTACAAACCTAACC
TTCGACCCACCCTACGTTCTCTTCAGCAGCAATCAGACTGTGTCAGGAGA
CCGAAAAGACACTGTCGTGAACGCCGAATCTACCGGCTCCTTTGTGTGGA
ACCTTGCGACCTATGACCTGCGCGAAGCGATGAATATCACGGCGCAGCAG
TTTCCTTACGGAGTGAATGAGTTCGAGAAGGCCGGGCTGACCGCGGAACC
ATCTACTGTTCTTCCGGTGCAGGTGCCGATGGTGAAGGAGTCGCCGGTGC
GGTTCGAGTGCGTGTATCATTCTACAATGAGACTGCCCGGAAATCCGCCC
ATGGGGACGGTGGATGTTGTGGTGGGGCGAGTGGTGGGCGTACATATTGA
TGAAAGGGTGCTTACGGATGGAATTCTGGATGTAAGAAAGACGAAGCCGA
TTGCTAGGTGTGGGTATTTTCAGTATGCGGTGGTTGAGGATACGTTTGAG
ATGGTTATTCCCGGGATGTCGGCGGATGTGCTATATGGGCTAGAGGGGAG
TGCCAAGATGAATGGGGAGAAGGCGAGGGAAATTAAAGAGGGGGAGGGGA
AGAAGGACCAGGCGCTGTTGTAGATGTTCTACCAACCCGGCAAAACCGAC
CACGGCCTGCCCCATGATCCATTCAAGGCATGCGTCGTCCCCCGCCCAAT
CGGCTGGATAAGCACAACTTCTCCCACCGGCACCCCCAACCTCGCCCCCT
ACAGCCAATTTACAAACCTAACCTTCGACCCACCCTACGTTCTCTTCAGC
AGCAATCAGACTGTGTCAGGAGACCGAAAAGACACTGTCGTGAACGCCGA
ATCTACCGGCTCCTTTGTGTGGAACCTTGCGACCTATGACCTGCGCGAAG
CGATGAATATCACGGCGCAGCAGTTTCCTTACGGAGTGAATGAGTTCGAG
AAGGCCGGGCTGACCGCGGAACCATCTACTGTTCTTCCGGTGCAGGTGCC
GATGGTGAAGGAGTCGCCGGTGCGGTTCGAGTGCGTGTATCATTCTACAA
TGAGACTGCCCGGAAATCCGCCCATGGGGACGGTGGATGTTGTGGTGGGG
CGAGTGGTGGGCGTACATATTGATGAAAGGGTGCTTACGGATGGAATTCT
GGATGTAAGAAAGACGAAGCCGATTGCTAGGTGTGGGTATTTTCAGTATG
CGGTGGTTGAGGATACGTTTGAGATGGTTATTCCCGGGATGTCGGCGGAT
GTGCTATATGGGCTAGAGGGGAGTGCCAAGATGAATGGGGAGAAGGCGAG
GGAAATTAAAGAGGGGGAGGGGAAGAAGGACCAGGCGCTGTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0010181 | FMN binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008288-T1.utr5p1 | KJC3_008288-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012349 |
| DBxref | InterPro:IPR002563 |
| DBxref | PFAM:PF01613 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1502038..1503016 + |
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