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KJC3_008299-T2, KJC3_008299-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008299-T2
Unique NameKJC3_008299-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1533483..1535668-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008299-T2 ID=KJC3_008299-T2|Name=KJC3_008299-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2186bp|location=Sequence derived from alignment at ch6:1533483..1535668- (Aspergillus niger KJC3)
TTTTCATTCTCTCAAAAGCTACAAGAATCGATAACTAAGAAAATGATCGA
CTCCGGCAAAGAATCCCTTCACCCAGCAACCCCTCACAATGCACTGGACA
GCCCAGCTCCATCCAAGAGGAGAAAGCTACCTGTTACACTTCTTTCTGGA
TTCTTAGTACTTCTCCCTCCTGCATTCTCAAATACACAGAGACTAATATA
ATAACCATCTAGGGAAGCGGCAAAACCACCCTTCTCGAACACATCCTCCT
CTCGCCCGACCATGGCCTCCGCATCGCAGTCATAGTAAATGACATGAGCA
GGTACATCCATCCATACCCAATTCTCGATTCAATTCCCATCTAATATGGA
GGTATAGTTTGAACATCGACGCAACCCTAATCAAACACCACCACACCGTC
TCCCACACGAAGGAATCCCTCATCCAGCTACAAAACGGTTGCATATGCTG
CACACTCCGCGGGGACTTACTCGCCGAGCTAGCGCGACTAGCATCCCAAG
ATGGAGTCGAGTACGTCGTTATCGAGAGCACAGGGATTAGTGAGCCGATG
CAGGTGGCTGAGACGTTCACGGCGGAGTTTGGGGCTGCCATGTTGGAGGC
GGATGGGGATGGGAGTGGTGGTGATCAGGTGTTGAGTGTGGAGGAGAGGA
AGGTTATTGAGGATATGTATGTTCCCTCTTTTCCCCTTCTATTGCGTGAT
TGATGTGGGCTGATGGATTGGTATGTACAGTGTCAAACAAGGCGGTCTCC
ACACCCTCACTACCCTCGACACCACCGTAACTGTCATCGACGCATTCAAT
CTCCACTCTAACCTGGACACCGCGGAATTTCTGTCCGATAGATATACCTC
CGGGGAAGTAATCCCCGAGGATGAGCGAACCATTTCCGACCTGATGGTCG
ATCAGATTGAGTTCGCGGATGTGATTATCATCAACAAGATTGATCTCGTT
GATAAGGTTGCTAAAGAGAAGATCCACACACTGATCAAATTGCTTAATCC
CGCGGCCAAGGTCATGGAGGCGAAGTACTCCAAGATTGATGTTAGGGAGA
TTCTGGGCACGGGGAGGTTTGATTTCGTCAAGGCGGCGAGCGGTGCCGGC
TGGTTGAGGAGTCTGCATGAGATGAGTCGGTTGAATACTGGGAATGGGGA
CAGGGTGGCGCCGAGGCCGGAGACGGTTGAGTAAGTTTATTATCTCTTCT
TCGTTTGACTGTTATGTGGCTGTGGTTGTGGTTTGCTCTTTGGCTAATAT
GTTGGCAGGTATGGGATTAATAACTTTGTGTATACGGCTAGACGGCCGTT
TCATCCCAGGAGGCTGTTCAAGTTGCTCCATGATAAGTTCATTATCTTGC
AGAATGCGGCTGGGGCGGATGATGATGATGATGAAGAAGATGATGAAGAG
GATGATGATGATGACGAAGAAATGAAAGATGACGATGAAGATGACACTGA
AGACGAGGAAGAAGAAGAAGACGACGACGAAGAAGACATCACCTCCATCC
CCCCCGAAACCATCCTTTCCAACAAACGCTCTGACCCCATCCTCGCCCCC
ATCCTCCGCTCCAAAGGCTTCTTCTGGCTCGCCACCCGCCCATACCAATT
CGGCGAATGGAGCCAAGCCGGCGCCATGCTCACATTGGGCTGTGGTGGCG
GGTGGTTCGCCGAACTACCTGACGAAGCATGGCCGGAGGATGCGGACGTG
CGCAAGTCCATTGAAGACGACTTCAAGGGTGAATGGGGCGATCGGCGTCA
GGAGATTGTCTTCATTGGGGAGGGCATTGATACGGCAGCAATTAAAAAGC
TGCTTGATGAGTGTCTGCTAGACAAAAAGGAGATGAAGAAGTGGGAGAAA
GTGATGCGGACGAAGGGGGTCAAGAGGGCCGAGAAGCAGGAGGTTATGGC
GGGGATTTGGGAGGATGGATGGGAGGATTGGCCTGATTTGGAGGAGGATG
ATATTAAGGATGAGGAGGAGGAGAAGAAGAATGGGGAGAAGAGTGGGAAG
AGGAAGGCAAGTGAATTGATGAACGGCCATGGACATGGACATGCTCATGC
TCATGGGCACTCCCATGCACATGGACAGGCACATAAGACTCGACCAGTGG
TTAAGGAATGATGTTCATTATAGACTGTTATTTACTACTAAAAGTGACTA
TTTGCGTAACTCATGAAACTATATACTCTCACACCA
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Coding sequence (CDS) from alignment at ch6:1533483..1535668-

>KJC3_008299-T2 ID=KJC3_008299-T2|Name=KJC3_008299-T2|organism=Aspergillus niger KJC3|type=CDS|length=2622bp|location=Sequence derived from alignment at ch6:1533483..1535668- (Aspergillus niger KJC3)
GTATGGGATTAATAACTTTGTGTATACGGCTAGACGGCCGTTTCATCCCA
GGAGGCTGTTCAAGTTGCTCCATGATAAGTTCATTATCTTGCAGAATGCG
GCTGGGGCGGATGATGATGATGATGAAGAAGATGATGAAGAGGATGATGA
TGATGACGAAGAAATGAAAGATGACGATGAAGATGACACTGAAGACGAGG
AAGAAGAAGAAGACGACGACGAAGAAGACATCACCTCCATCCCCCCCGAA
ACCATCCTTTCCAACAAACGCTCTGACCCCATCCTCGCCCCCATCCTCCG
CTCCAAAGGCTTCTTCTGGCTCGCCACCCGCCCATACCAATTCGGCGAAT
GGAGCCAAGCCGGCGCCATGCTCACATTGGGCTGTGGTGGCGGGTGGTTC
GCCGAACTACCTGACGAAGCATGGCCGGAGGATGCGGACGTGCGCAAGTC
CATTGAAGACGACTTCAAGGGTGAATGGGGCGATCGGCGTCAGGAGATTG
TCTTCATTGGGGAGGGCATTGATACGGCAGCAATTAAAAAGCTGCTTGAT
GAGTGTCTGCTAGACAAAAAGGAGATGAAGAAGTGGGAGAAAGTGATGCG
GACGAAGGGGGTCAAGAGGGCCGAGAAGCAGGAGGTTATGGCGGGGATTT
GGGAGGATGGATGGGAGGATTGGCCTGATTTGGAGGAGGATGATATTAAG
GATGAGGAGGAGGAGAAGAAGAATGGGGAGAAGAGTGGGAAGAGGAAGGC
AAGTGAATTGATGAACGGCCATGGACATGGACATGCTCATGCTCATGGGC
ACTCCCATGCACATGGACAGGCACATAAGACTCGACCAGTGGTTAAGGAA
TGAATGTACAGTGTCAAACAAGGCGGTCTCCACACCCTCACTACCCTCGA
CACCACCGTAACTGTCATCGACGCATTCAATCTCCACTCTAACCTGGACA
CCGCGGAATTTCTGTCCGATAGATATACCTCCGGGGAAGTAATCCCCGAG
GATGAGCGAACCATTTCCGACCTGATGGTCGATCAGATTGAGTTCGCGGA
TGTGATTATCATCAACAAGATTGATCTCGTTGATAAGGTTGCTAAAGAGA
AGATCCACACACTGATCAAATTGCTTAATCCCGCGGCCAAGGTCATGGAG
GCGAAGTACTCCAAGATTGATGTTAGGGAGATTCTGGGCACGGGGAGGTT
TGATTTCGTCAAGGCGGCGAGCGGTGCCGGCTGGTTGAGGAGTCTGCATG
AGATGAGTCGGTTGAATACTGGGAATGGGGACAGGGTGGCGCCGAGGCCG
GAGACGGTTGAGTATGGGATTAATAACTTTGTGTATACGGCTAGACGGCC
GTTTCATCCCAGGAGGCTGTTCAAGTTGCTCCATGATAAGTTCATTATCT
TGCAGAATGCGGCTGGGGCGGATGATGATGATGATGAAGAAGATGATGAA
GAGGATGATGATGATGACGAAGAAATGAAAGATGACGATGAAGATGACAC
TGAAGACGAGGAAGAAGAAGAAGACGACGACGAAGAAGACATCACCTCCA
TCCCCCCCGAAACCATCCTTTCCAACAAACGCTCTGACCCCATCCTCGCC
CCCATCCTCCGCTCCAAAGGCTTCTTCTGGCTCGCCACCCGCCCATACCA
ATTCGGCGAATGGAGCCAAGCCGGCGCCATGCTCACATTGGGCTGTGGTG
GCGGGTGGTTCGCCGAACTACCTGACGAAGCATGGCCGGAGGATGCGGAC
GTGCGCAAGTCCATTGAAGACGACTTCAAGGGTGAATGGGGCGATCGGCG
TCAGGAGATTGTCTTCATTGGGGAGGGCATTGATACGGCAGCAATTAAAA
AGCTGCTTGATGAGTGTCTGCTAGACAAAAAGGAGATGAAGAAGTGGGAG
AAAGTGATGCGGACGAAGGGGGTCAAGAGGGCCGAGAAGCAGGAGGTTAT
GGCGGGGATTTGGGAGGATGGATGGGAGGATTGGCCTGATTTGGAGGAGG
ATGATATTAAGGATGAGGAGGAGGAGAAGAAGAATGGGGAGAAGAGTGGG
AAGAGGAAGGCAAGTGAATTGATGAACGGCCATGGACATGGACATGCTCA
TGCTCATGGGCACTCCCATGCACATGGACAGGCACATAAGACTCGACCAG
TGGTTAAGGAATGAATGTACAGTGTCAAACAAGGCGGTCTCCACACCCTC
ACTACCCTCGACACCACCGTAACTGTCATCGACGCATTCAATCTCCACTC
TAACCTGGACACCGCGGAATTTCTGTCCGATAGATATACCTCCGGGGAAG
TAATCCCCGAGGATGAGCGAACCATTTCCGACCTGATGGTCGATCAGATT
GAGTTCGCGGATGTGATTATCATCAACAAGATTGATCTCGTTGATAAGGT
TGCTAAAGAGAAGATCCACACACTGATCAAATTGCTTAATCCCGCGGCCA
AGGTCATGGAGGCGAAGTACTCCAAGATTGATGTTAGGGAGATTCTGGGC
ACGGGGAGGTTTGATTTCGTCAAGGCGGCGAGCGGTGCCGGCTGGTTGAG
GAGTCTGCATGAGATGAGTCGGTTGAATACTGGGAATGGGGACAGGGTGG
CGCCGAGGCCGGAGACGGTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008299KJC3_008299Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008299-T2KJC3_008299-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008299-T2.cdsKJC3_008299-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008299-T2.utr3p1KJC3_008299-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008299-T2.exon4KJC3_008299-T2.exon4Aspergillus niger KJC3exon
KJC3_008299-T2.exon3KJC3_008299-T2.exon3Aspergillus niger KJC3exon
KJC3_008299-T2.exon2KJC3_008299-T2.exon2Aspergillus niger KJC3exon
KJC3_008299-T2.exon1KJC3_008299-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008299-T2.utr5p3KJC3_008299-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_008299-T2.utr5p2KJC3_008299-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008299-T2.utr5p1KJC3_008299-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003495
DBxrefInterPro:IPR011629
DBxrefPFAM:PF07683
DBxrefPFAM:PF02492
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1533483..1535668 -
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