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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1551516..1556747- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008306-T1 ID=KJC3_008306-T1|Name=KJC3_008306-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5232bp|location=Sequence derived from alignment at ch6:1551516..1556747- (Aspergillus niger KJC3)
GTCCCTGCACCTTTTGGCTGCAGGAAAAACGAGACTTCCGCCATCCTTCG
CCGTCTTGGCTCGGTGGGATTTGTGCTCTCTCCATAATCCATACTCCATC
ACACCCGCCCGATACTTAGTGTTGTCTGATAATAATAACTCCCTTGTGCT
CAGCCTCCTCCGTTCCTAGCGACTCGCAAAAATAGCATTCTCTTGAACCG
TGTGAATCAGCCAAGAAATCTTCGCATCAACAATGCGCGTAAAACAACCA
TTGCCAGTTCCTATTATTATCTTTCGCGTCTGAGGGTACTAAATAAGTCC
AGAGGACAAGAATAGTGTGCATCTAAGCTTTCGAACCTATAATGTTCCTA
CTTTCTTAGTTCCCCTTCCCACCCCCCCATCCATGGCCATCATTATATCC
CGACTACGAATCATGGGTCCTCCAACGCTGACCCCAAACATCCATTGTCC
GTGGCTATCTACAACACCTAATGGATAGACGAAAAGTGCGCCCAACCGTC
TTCCTAATTATCAAACTCGAAACCCACCAGCCCAATCATTGAGCAGATAG
GAACCGCCGAAAACCGGCCATTCCGCTGGACCAACCATGAAGTTCACCCC
ACAAAGGTGTCGAGCCAAAGAAGAATCCAAACCATGACTAGTCTACTGTC
TAATGTGGCACTCCGAACTAACCGACCCTTTCCCACTTCTGATTCGCCGG
TTGCAGGGGTCCGACACCCTTCCTGGTACTCCGTACATCCTTCTCTTCAG
CATGCTCCCTGTCCGTGTCAAGCTCTTGACTCGGCCCATAAATAATGACC
ATCAGATCATTCGTGGATCCGGGAAACGATCCGGCATCCCGACTCGGTAG
TCATGCAGATGGAGGAGATACACATCTTCAAGGGTTCATCAGTCCCAGGC
CTCCGGCGTCGGTATACCCATCGGGTCCGAACAATCGTGCAGGGTCCTTA
CCCCGGGGACACGAAGTGATACAGTAGTACCACTCACTATACTCCATTTA
ATTTTAAGCATATAACATTCAATTCAATGCTACTGGGCTAATGGGCTGAG
GTGCTAGAGCTTAGAGGGATGTTGGCACAGATTGACCCGGACTTGACAGA
ACAATTATCTCTGCTGATTGGTTTAACATCATTTTCGCAGCTGCTGGCTA
CCCACCTATTAGCCCATCACACGCCCGCTAAACAGGCGTTTTGTTTCTGC
CTGGAGAATGGGGTCGGTTTACTTATCAGGGATGCATGCTTATTGATTAA
TGATTAATATTAGTATTGCGGTTGAAGAGACTAATTGAGTAGGTGGCTAC
CGATGGATCGGGGGTTACACTCAGGCCAATCTATGTCGTGTACGGCGAGT
CCCGCGGATGGAGATCGTCTATCCGGCTATTGTCTTATCCGGCAACAGTA
CGGAGGGCAGGCGGTCACTCGTGGCAGATGCAGCGGTCCGGCAATGCGGC
TGGAGATGCTGAACCCGCGAACCCTTTGGGACTCCCGGTGGCTGATGACC
GCAACCGAGCATTCTTGCCATGGTCCCCCGGCTGTCATCTTCTGGTTCTG
TTATAATCACACTTTCTCCAGCGCGCCCCCCCCTCCGTTGCCTTTGCCCA
GCAAACCAATCACGCCTACTAGCCCAGCCTGCTTTACGCGTTTCCGTCCC
ATTGCTGCCCTCGCAGGCATGCCAGCTGCTGCGCCAATTGACCGCCTTCG
TCCCTGCTGCACTTACTGCACTCCGCCTCCGCCCGACAGCTAGCAAAGCT
AGTCGGCCATTTCCTCACCCCGCCATCTTCCCCGGTATACTAGCTTCTCC
GCTTCAATCACAAACAGGAAAAAATAAAAAAAAATATAAGAGCGGCCCTC
CCCAACGCTATTCACCCTCAATTGAAGCATGGCAACTCCGAATATGACGG
AGAGCAGATGATTGATCCTCACTGGGTTGCTTCGGACATACTGCTGATAT
CATCTCGATTTATCGTTGCTTCCAGCATCTTAGATTTTCTGCAGCGGACG
GTCTTGCTTCCCGCGCACCGACCACACAAGGCGTTTGTCCCACTGATCCA
CGTAAACGTCCACAATGCACAAGATTTCCCCGGTAGATAAGCGCCGGAGA
TTTGATCCTGATGCCTCTCTGGTGCTCGTGGGCATCCGGGGGTGCGGGAA
GCGGTCTCTGGGATTTGTTGCTGCCACTGCGTTAAAACGGCGGTTCATCA
CGGAAGACCACTATTTTAAGGAAGTGACCGGATATACCAGGCATGAGTAT
CTCAAGCGCTATGGAAGTCAGGAATTCCAGCAACGCGATGTCGAAGTCCT
CAAGTCAATGCTTGACAACCACCGCTCCCGCTGCGTGATTGAATGCGGTC
TCGGCAGTCTTACTCGTCCGGTTCAAGAGCACCTTCGTCACTATTCTGCT
ACCAATCCAATTGTATACATAGTTCGCGACATGGATCGCATTCAAAGCCT
ATTAGGTCTGGAGGAGCAATCGGTAAAACTGCTTGCCGAGGGCGATCCCT
TACACAGAACATGCTCCAATTTCGAGTTCTACAACGTTGAAGATCGTTCC
AGTATCGCGGCTCAGACGGATGAGGGATCGCCGGACCGACGATGTGTTGA
TTATTCCTTCAAGTTGAAGGAAGCGAAAGAGGATTTCACGCGCTTTGTGC
GTTTCGTGACTGGTACAGATGTAGGACACACCAGTTATGACTCGCCTTTT
GTCCTACTTGAGACTCCCCCCGAACTTCGCTCCTTCACCCATGCCATTTT
TGTACGAACTTCCGACCTGGCAGAAGGCAATGTTAAACTACAAGAGCTTG
AGTCAGGTGGTGATGCCATTGAACTGTGTGTTGACCGCTGGGGCGCGGGA
CTGACAGCAACTCTCAGCAAACAAGTCGCTCTACTTCGGAGGAATGCTCG
TACGCCCATCATAATCTCGATAGATAAATCTTCTACAGGAATTGCTAGAG
ATGATCTGTCTCCCGCAAAGGTGAACAATCTATATTTCGCTATTGTGGAG
CATGCCCTACGGCTGGCGGTCGAATATCTGGCCGTGGACTTGAGCCAGGA
ACAGTCTCGAGTGGAGGAGGCAATTCGCACCCGCGGCAACACAAAGATTA
TTGGTCAACGCATATTTGAACCTTCTGCGCCAGAGACGTGGGAGAGCGAA
GAATGCCTTTCCCTCTATTTTGAAGCCGAGAAGCTGGGGTGCCAGCTCGT
TCGCTTTCTCCGGGTTGCAACGACGCGTGAGGATAACGCAGCGGTTGCTA
AATTTACAAACAAGGTTCATGCCTTGTCTGGCGAACATCCTCCAGTTATC
GCGTACAACATCGGCCGTCTTGGCCGGACCTCGCAAGTGTTCAATTCTAT
TCTCACCTCTGTAACACACCCGGCAATCGAGAAGTCCTCCGACAACCAGC
GAGACCCGCAGATCACGTCTCGTGATGCGGTCCAGGCTCTGTTTCAGAGT
TACGTACTGGACCCGCTACAGTTCTTCATTCTCGGAGGCAATGTCGCATA
CAGTCTTTCCCCTGCAATGCATAATGCTGCTTTCCGCCACTGTGGCATGA
GCCATACCTATACTATACCGGACTCGCCCTCGCTTGCAATCATGGACCGG
TTGGGCAGGGATTCACATTTTGGGGGGTCAAGTGTGGTTCAGCCATGGAG
AGTACAGCTGTCCCATAAGCTCGCGGCGAGGAGCCGCCATGTGGAGGCAA
TCGGTGCGATCAACACGATCGTACCACTACGCGCCGGTCCTGATGGATCC
ATGTATCCTTTACAAGAGCAGGCGAGTCGGCGTAACCAGGCCGGTCCTGT
GCTAGGGTGGTACGGTGAGAATACGGACTGGGTTGGCATTATGAATTGCA
TAAACCGCAATCTCTCTCCACGCAATGCCATCAGCCCATCGAAGACTACT
GGGCTGGTGATAGGAGCGGGCGGGATGGCTCGCGCCGCTGTCTATGCCAT
GCTGCGGCTCGGATGCCGTAAGATCTTTATCTACAACAGAACTTTATCAC
GAGCGGAAAGTGTCGCTCGCCATTTCAACTCCTGGGCAGCCTCACAAGTG
GACTCGACGGAAGTTGTGTATGTGCTAAAGTCTTTGAAGGATGAATGGCC
CGAGGACGCCTGTCCGCCTTGCATGATTGCATCTTGTGTGCCTGCGGACC
GCGACCGGGATGAACCGCCAGCCAATTTTGAAATGCCTATGCAATGGCTG
GGGAGCCCAACTGGCGGCGTAGTTCTTGAGGTAAGATCTCTATCAAAGTG
CTCAGGTGGGCCTGACTGACGTTTCCTTGCTAGTTTGCTTACAAGCCACT
GGACACGCCACTGCTGCGCCAGATGCGTCGTATTCGGACAGAAACCGGGC
GCCCTTGGGTGTTGGTTGACGGACTTGACAATGTGGTCGAGCAAGCGATA
CCCCAATTTGAGCTCATGACGGGACGAAAGGCACCCCGTCGCTTGATGTT
TTCAGAAGCCCTTCACAACTATGTTGGCGAAGACGGGCACTTCGATGACA
AGACGATCCAAGCCAGGCTCGACCATGTCCGGTAAGAACACTGGTCTGGT
GTGTTAAAGAGCATAGCTACCTTACCTCATCTACAGAGGTATATCAATGC
TCCATTTAGTGGCTGCAAGTAATCATGACCCTGAGCCCAGTTCGGGTCAC
ATTTTTAATGTTTTCCTCGACGCAGCCGCTGCTATGTCTAAAGGACTTCC
ATACCGGGAATATAAAGGATATGTCTGGGGCATTCTACGTTAGAAGGAAT
TGAGAAGGGCACCTTTATGCAAGGCATGAGGTGGTTGCTGCAGTGCGAGG
CTACGACTAGGCCAGGATGCAAAACACCGCTCATCCGGCAAATTATTAGG
GAGTTCGATGGGCTGATATCCCTGCATCTGGATGTGGGTTTTCACTGGTC
ACAGGAATAAAATGATCCACTACAGTGCCCGGTCCGACGGATGTTAATGG
CGTGGCATCAGGCCTAAATTTAGCTGCTTATGCCATTGTTACTTCGGTAG
TACATGCATGCATGGCCAGGCAGCCATAGGCCACGGCCCAGGATTGTACG
GTCAAATGGGGAGCTTGATGTTGTCAGCGGCGGTTAAGGCCGGGTGTTTT
CGGTGTTTGGCGAGCGGGATTCTTCTGCTGCATTTATACTGCGCCATCAT
AAATCAGCAGAGGAAGTTCCATATGCAATAGCACGTTCTAATTGACAAGA
TAGCGTTGCTCTTGAATAACAGAATCTAAGAG back to topCoding sequence (CDS) from alignment at ch6:1551516..1556747- >KJC3_008306-T1 ID=KJC3_008306-T1|Name=KJC3_008306-T1|organism=Aspergillus niger KJC3|type=CDS|length=4836bp|location=Sequence derived from alignment at ch6:1551516..1556747- (Aspergillus niger KJC3)
TTTGCTTACAAGCCACTGGACACGCCACTGCTGCGCCAGATGCGTCGTAT
TCGGACAGAAACCGGGCGCCCTTGGGTGTTGGTTGACGGACTTGACAATG
TGGTCGAGCAAGCGATACCCCAATTTGAGCTCATGACGGGACGAAAGGCA
CCCCGTCGCTTGATGTTTTCAGAAGCCCTTCACAACTATGTTGGCGAAGA
CGGGCACTTCGATGACAAGACGATCCAAGCCAGGCTCGACCATGTCCGGT
AAATGCACAAGATTTCCCCGGTAGATAAGCGCCGGAGATTTGATCCTGAT
GCCTCTCTGGTGCTCGTGGGCATCCGGGGGTGCGGGAAGCGGTCTCTGGG
ATTTGTTGCTGCCACTGCGTTAAAACGGCGGTTCATCACGGAAGACCACT
ATTTTAAGGAAGTGACCGGATATACCAGGCATGAGTATCTCAAGCGCTAT
GGAAGTCAGGAATTCCAGCAACGCGATGTCGAAGTCCTCAAGTCAATGCT
TGACAACCACCGCTCCCGCTGCGTGATTGAATGCGGTCTCGGCAGTCTTA
CTCGTCCGGTTCAAGAGCACCTTCGTCACTATTCTGCTACCAATCCAATT
GTATACATAGTTCGCGACATGGATCGCATTCAAAGCCTATTAGGTCTGGA
GGAGCAATCGGTAAAACTGCTTGCCGAGGGCGATCCCTTACACAGAACAT
GCTCCAATTTCGAGTTCTACAACGTTGAAGATCGTTCCAGTATCGCGGCT
CAGACGGATGAGGGATCGCCGGACCGACGATGTGTTGATTATTCCTTCAA
GTTGAAGGAAGCGAAAGAGGATTTCACGCGCTTTGTGCGTTTCGTGACTG
GTACAGATGTAGGACACACCAGTTATGACTCGCCTTTTGTCCTACTTGAG
ACTCCCCCCGAACTTCGCTCCTTCACCCATGCCATTTTTGTACGAACTTC
CGACCTGGCAGAAGGCAATGTTAAACTACAAGAGCTTGAGTCAGGTGGTG
ATGCCATTGAACTGTGTGTTGACCGCTGGGGCGCGGGACTGACAGCAACT
CTCAGCAAACAAGTCGCTCTACTTCGGAGGAATGCTCGTACGCCCATCAT
AATCTCGATAGATAAATCTTCTACAGGAATTGCTAGAGATGATCTGTCTC
CCGCAAAGGTGAACAATCTATATTTCGCTATTGTGGAGCATGCCCTACGG
CTGGCGGTCGAATATCTGGCCGTGGACTTGAGCCAGGAACAGTCTCGAGT
GGAGGAGGCAATTCGCACCCGCGGCAACACAAAGATTATTGGTCAACGCA
TATTTGAACCTTCTGCGCCAGAGACGTGGGAGAGCGAAGAATGCCTTTCC
CTCTATTTTGAAGCCGAGAAGCTGGGGTGCCAGCTCGTTCGCTTTCTCCG
GGTTGCAACGACGCGTGAGGATAACGCAGCGGTTGCTAAATTTACAAACA
AGGTTCATGCCTTGTCTGGCGAACATCCTCCAGTTATCGCGTACAACATC
GGCCGTCTTGGCCGGACCTCGCAAGTGTTCAATTCTATTCTCACCTCTGT
AACACACCCGGCAATCGAGAAGTCCTCCGACAACCAGCGAGACCCGCAGA
TCACGTCTCGTGATGCGGTCCAGGCTCTGTTTCAGAGTTACGTACTGGAC
CCGCTACAGTTCTTCATTCTCGGAGGCAATGTCGCATACAGTCTTTCCCC
TGCAATGCATAATGCTGCTTTCCGCCACTGTGGCATGAGCCATACCTATA
CTATACCGGACTCGCCCTCGCTTGCAATCATGGACCGGTTGGGCAGGGAT
TCACATTTTGGGGGGTCAAGTGTGGTTCAGCCATGGAGAGTACAGCTGTC
CCATAAGCTCGCGGCGAGGAGCCGCCATGTGGAGGCAATCGGTGCGATCA
ACACGATCGTACCACTACGCGCCGGTCCTGATGGATCCATGTATCCTTTA
CAAGAGCAGGCGAGTCGGCGTAACCAGGCCGGTCCTGTGCTAGGGTGGTA
CGGTGAGAATACGGACTGGGTTGGCATTATGAATTGCATAAACCGCAATC
TCTCTCCACGCAATGCCATCAGCCCATCGAAGACTACTGGGCTGGTGATA
GGAGCGGGCGGGATGGCTCGCGCCGCTGTCTATGCCATGCTGCGGCTCGG
ATGCCGTAAGATCTTTATCTACAACAGAACTTTATCACGAGCGGAAAGTG
TCGCTCGCCATTTCAACTCCTGGGCAGCCTCACAAGTGGACTCGACGGAA
GTTGTGTATGTGCTAAAGTCTTTGAAGGATGAATGGCCCGAGGACGCCTG
TCCGCCTTGCATGATTGCATCTTGTGTGCCTGCGGACCGCGACCGGGATG
AACCGCCAGCCAATTTTGAAATGCCTATGCAATGGCTGGGGAGCCCAACT
GGCGGCGTAGTTCTTGAGTTTGCTTACAAGCCACTGGACACGCCACTGCT
GCGCCAGATGCGTCGTATTCGGACAGAAACCGGGCGCCCTTGGGTGTTGG
TTGACGGACTTGACAATGTGGTCGAGCAAGCGATACCCCAATTTGAGCTC
ATGACGGGACGAAAGGCACCCCGTCGCTTGATGTTTTCAGAAGCCCTTCA
CAACTATGTTGGCGAAGACGGGCACTTCGATGACAAGACGATCCAAGCCA
GGCTCGACCATGTCCGGTAAATGCACAAGATTTCCCCGGTAGATAAGCGC
CGGAGATTTGATCCTGATGCCTCTCTGGTGCTCGTGGGCATCCGGGGGTG
CGGGAAGCGGTCTCTGGGATTTGTTGCTGCCACTGCGTTAAAACGGCGGT
TCATCACGGAAGACCACTATTTTAAGGAAGTGACCGGATATACCAGGCAT
GAGTATCTCAAGCGCTATGGAAGTCAGGAATTCCAGCAACGCGATGTCGA
AGTCCTCAAGTCAATGCTTGACAACCACCGCTCCCGCTGCGTGATTGAAT
GCGGTCTCGGCAGTCTTACTCGTCCGGTTCAAGAGCACCTTCGTCACTAT
TCTGCTACCAATCCAATTGTATACATAGTTCGCGACATGGATCGCATTCA
AAGCCTATTAGGTCTGGAGGAGCAATCGGTAAAACTGCTTGCCGAGGGCG
ATCCCTTACACAGAACATGCTCCAATTTCGAGTTCTACAACGTTGAAGAT
CGTTCCAGTATCGCGGCTCAGACGGATGAGGGATCGCCGGACCGACGATG
TGTTGATTATTCCTTCAAGTTGAAGGAAGCGAAAGAGGATTTCACGCGCT
TTGTGCGTTTCGTGACTGGTACAGATGTAGGACACACCAGTTATGACTCG
CCTTTTGTCCTACTTGAGACTCCCCCCGAACTTCGCTCCTTCACCCATGC
CATTTTTGTACGAACTTCCGACCTGGCAGAAGGCAATGTTAAACTACAAG
AGCTTGAGTCAGGTGGTGATGCCATTGAACTGTGTGTTGACCGCTGGGGC
GCGGGACTGACAGCAACTCTCAGCAAACAAGTCGCTCTACTTCGGAGGAA
TGCTCGTACGCCCATCATAATCTCGATAGATAAATCTTCTACAGGAATTG
CTAGAGATGATCTGTCTCCCGCAAAGGTGAACAATCTATATTTCGCTATT
GTGGAGCATGCCCTACGGCTGGCGGTCGAATATCTGGCCGTGGACTTGAG
CCAGGAACAGTCTCGAGTGGAGGAGGCAATTCGCACCCGCGGCAACACAA
AGATTATTGGTCAACGCATATTTGAACCTTCTGCGCCAGAGACGTGGGAG
AGCGAAGAATGCCTTTCCCTCTATTTTGAAGCCGAGAAGCTGGGGTGCCA
GCTCGTTCGCTTTCTCCGGGTTGCAACGACGCGTGAGGATAACGCAGCGG
TTGCTAAATTTACAAACAAGGTTCATGCCTTGTCTGGCGAACATCCTCCA
GTTATCGCGTACAACATCGGCCGTCTTGGCCGGACCTCGCAAGTGTTCAA
TTCTATTCTCACCTCTGTAACACACCCGGCAATCGAGAAGTCCTCCGACA
ACCAGCGAGACCCGCAGATCACGTCTCGTGATGCGGTCCAGGCTCTGTTT
CAGAGTTACGTACTGGACCCGCTACAGTTCTTCATTCTCGGAGGCAATGT
CGCATACAGTCTTTCCCCTGCAATGCATAATGCTGCTTTCCGCCACTGTG
GCATGAGCCATACCTATACTATACCGGACTCGCCCTCGCTTGCAATCATG
GACCGGTTGGGCAGGGATTCACATTTTGGGGGGTCAAGTGTGGTTCAGCC
ATGGAGAGTACAGCTGTCCCATAAGCTCGCGGCGAGGAGCCGCCATGTGG
AGGCAATCGGTGCGATCAACACGATCGTACCACTACGCGCCGGTCCTGAT
GGATCCATGTATCCTTTACAAGAGCAGGCGAGTCGGCGTAACCAGGCCGG
TCCTGTGCTAGGGTGGTACGGTGAGAATACGGACTGGGTTGGCATTATGA
ATTGCATAAACCGCAATCTCTCTCCACGCAATGCCATCAGCCCATCGAAG
ACTACTGGGCTGGTGATAGGAGCGGGCGGGATGGCTCGCGCCGCTGTCTA
TGCCATGCTGCGGCTCGGATGCCGTAAGATCTTTATCTACAACAGAACTT
TATCACGAGCGGAAAGTGTCGCTCGCCATTTCAACTCCTGGGCAGCCTCA
CAAGTGGACTCGACGGAAGTTGTGTATGTGCTAAAGTCTTTGAAGGATGA
ATGGCCCGAGGACGCCTGTCCGCCTTGCATGATTGCATCTTGTGTGCCTG
CGGACCGCGACCGGGATGAACCGCCAGCCAATTTTGAAATGCCTATGCAA
TGGCTGGGGAGCCCAACTGGCGGCGTAGTTCTTGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
| GO:0003824 | catalytic activity |
| GO:0003855 | 3-dehydroquinate dehydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008306-T1.utr3p1 | KJC3_008306-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR013708 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR006151 |
| DBxref | InterPro:IPR001381 |
| DBxref | InterPro:IPR031322 |
| DBxref | PFAM:PF01202 |
| DBxref | PFAM:PF08501 |
| DBxref | PFAM:PF01487 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1551516..1556747 - |
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