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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1562545..1565849- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008308-T1 ID=KJC3_008308-T1|Name=KJC3_008308-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3305bp|location=Sequence derived from alignment at ch6:1562545..1565849- (Aspergillus niger KJC3)
ATGCTGGTTCAACCTTGTTTGATGCCCTCCTTGGGAGGTACCCGTACCTA
GGTACTGTGCGCTGCTTGATACGAAGGAGAGAGAGAAGGGGGGGGTGGGA
ATATCCTCGTACTTCTTTCTTAACCCACGCGTACGTCAATCGTAATCAAC
TCTCCAACAATCCTCCTTCCGCCAAGCCATCGACGCGGTACCCTGCGTCT
CTGATCCCTCTCGTTGGTTTATCTACCAAACCTCACTTGATCCGCGCGAC
ATCAACGCTTCTTTTCCCCCCCTTCGCCCCCCCTACGGTCGGGTATCTAG
ACTCTCTAGAACCTCCAACGTCCTGAACCTGGTCTAGTTACCTGGGAAGA
ATAAAAGATTTTCATTCAAACGAAAATTGAGAATTAGAAAAATAAATACG
GGAAAGAAAAAGAAAAAAAAAAAAAAAAAGAAAAAGGAAAAGAAAAGCAA
TAAGAAGAAACAACGGTCTAACCCTCCCATGCATTATCGAATCTCCACTC
GCCACTATCACTGAGCTCGCACTCGAGAAAGAAAGAGAGAGAGACAAGAG
GTATTTCCAGTTTCCCGCCGCTTCCCGTCAACGTTACTTTACGACTCTTG
CCTTTCACCCTGCGACTCTCATACACGCTGGTTTTATTCCCGACCTTTCA
TCTTAATCTAGCTTCGACCCCATCCAAGTTTCCGATCCTTTCGTGCGACC
GAGCAAAAGGCCTTCTCCACCCCCCTCCGAGGGGCTTGTTTGGAGCCGTT
AATAACTCTTGCATATCACTCCTTCCCCGACACCTTGATGGCTCCTTAAG
ACACATCTTGCTAGCTCTCTCGTCCTATAACATCTCCGAGGTGCCTTAGC
TGCCCCTTTATATATGCTGCCAATCAAGACCAAATCGTACTCTGGCCTAC
CCCATCTTGTACCATGATCTCAGCACTTTGTCGCCATTCCTAGATAGCGG
GCCTTCTCTCGACGCCTTTCGCGCCTTTCCATTGGAGACGAAACATCCTA
TTTCAACCAATTGTTCCACCTTTTCTTCTTCAGTTCCAGCCCTTGCAGCG
GCCACCTCTTTCACAGTTTGCCCTTATGTACCTGATTGAGCTGCTAGGAT
GACGGCCATACTTCCCGCCTCGAATGAGGGGCGCTCACGCTTCTCTCCGG
ACCCTTTGCGAAGTCCAATCACTCAAACCTACTTCCTCGAAGAGCCCAAT
GTTGCTACGGCCAAGTTCAATCTGCCCGCATACCATCGCAAGGATCGTTC
TGATGCCGTGGTGTCCTCGCCGTCGCGGTCAGAGTCTCCATCCCCAGATT
TCACTATTACAGCAGTGGGGAATCTCCCTCCCACGCCTGCATCTCTGAGC
AGTTTATCTCTTATGAGTGAGGACCATGATGACGACGAGTTGGTTCTACC
TTCGTACGATTCCAGTCAATTCGCACAAAAGGAGCCCGAAGCCCTCAGTG
ATGTGTCTGTGGACTCCTCGGCGGACTTTGCACGCTTGACACAGGCACCA
GCTGCTGATGATAGTACGATCGAGGACGAGCCATCGAGGCATGTGGATTA
CCTTTCTCATGAATGGAGACAAGAGGATATTTGGGCGTCGTGGCGTTATG
TCGTGGCTCGGAGGAACGTTTACGATAATGGGACAAGGCTAGAGAATGCC
TCGTGGAGGACGTGGGCTAAGCTGAAACTCAATCTGGGCACAGTATCGCC
AGAAGCCCTCAACTGGTCAGTTCTTTTTGTCATAGTCTCCCAGGATTTGG
TTCTTTGCTGATACCCCTTACAGGCTGAAGGACTGCGATGTAACGTGGTT
GTACGGACCCTTAAAGACATCCAATAAGCGGGAGAAGGCATTCAATGGCT
CTCCTCCTCCCAGCCGTCTAGAGACACCTACCTTATATCCGGATAGGAAA
CCGATTCTGAAGAAGAGGACGGCTTCTGAGACTATCTTGCAGCGTTCTCT
GTCCCAGCATACACTCTTGCAACATGCGGGTGCCATTCTAAAAGCACAGG
AGGCTGAAATCAACCGTAATCGTCCCCCATTACAGAGGGCCTCCTCGGAG
TATGGACATCTACTTAGCAAATCGTCCACCACTCCCGTGGGGGGTACCGT
TAAGGGTACCGCCACAAATACGTCAACGTCGGCCACTCCTAGCGAACGAC
GGCATATTCACTTCAACAACGAGGTGGTGCAATGTATCGCTGTCGAGGCG
AAAGAGGAAGACGATGGATGGCCTGTTCATTTTGGGGATGAGTCATCAGA
GGATGGTATCGTTATGATGAAACACATCCATTCCGACTCGTCGCTCAGCG
ACAAAGGTACGCCTCGTGGTAGCCTTGCTGGCGAAAACAAAACCATCGCC
CCGCTTCCTTCCACCACACTCAAGTACCGATGGGATGCGTCAGATCATCC
GGATTTGCAAGATTGTCGAGGGGATGCCCGTGCGAACCGACAATCCACAT
CAGAATCGCCAGCATCCTCAATAATGGGTCGGTGGTCCAGCTACTTCTCA
AACTCCACGTCTCCTACTTCATCCGGAGCCGAGAAATCGACGCGGACAAA
TGGACGATCTGGCAGGAACATTGCACCATCTGCCAATTTTCTGCTTGATG
AAGAAGAGAATGACATGGAATTTGACTGGGAACCAAGCCGCAACTCATAT
GGCCTAGGGAGTCTAAGCCGTCCTTGGTTTGTGAATCCAGAAGATGATGA
GGAGCTCGATTACTACTTCCATTCGATGTCTCCGGGAGGAATGACACCCA
ATGAAGAAGATGATGAACCATTGAGTGCAAGCATCTTTGACCGTGTGGCG
GACACCGTAAACACAGCCAAGGATATTGCACATGTGATATGGAACGTCGG
CTGGCGGCGGTGATTTTCTCTCCTTGGAGCATCTCTAAGGTCGCAGAGCG
GGCTTTACGACTTAATGCACTTAATTTCCTAACCAACAATTTCTCATGCA
TCTTTCTTATACAATAAACGACCAGGAAGACGGGTTGCGGCGTTCTGAGC
TTTCACCAATCAATGTTGCTGGCTGCTGGTCGACGATAAAAGGGGTTACA
GGAGGGATTGTTTATTTCTTTTTCTACATTTTCCATGGGGCTGTATGTGC
CTGGAGGAAGCCGGAATCTCCAGAATATGTTTTGGCGTAGTTCATGTTCG
GTTTTGGTTCTGCCTGGGGGCGTTCTTCGATGGGCTTTCATGACGGCTTT
AATCTCCTTGCATCTTATTTTCCTTTCACTCCCAGATATCACCACGCGAG
GTAGCATTGACTCCTTATGACCCAATGAGACATATGATGATCCAACACAC
AAGCA back to topCoding sequence (CDS) from alignment at ch6:1562545..1565849- >KJC3_008308-T1 ID=KJC3_008308-T1|Name=KJC3_008308-T1|organism=Aspergillus niger KJC3|type=CDS|length=3414bp|location=Sequence derived from alignment at ch6:1562545..1565849- (Aspergillus niger KJC3)
GCTGAAGGACTGCGATGTAACGTGGTTGTACGGACCCTTAAAGACATCCA
ATAAGCGGGAGAAGGCATTCAATGGCTCTCCTCCTCCCAGCCGTCTAGAG
ACACCTACCTTATATCCGGATAGGAAACCGATTCTGAAGAAGAGGACGGC
TTCTGAGACTATCTTGCAGCGTTCTCTGTCCCAGCATACACTCTTGCAAC
ATGCGGGTGCCATTCTAAAAGCACAGGAGGCTGAAATCAACCGTAATCGT
CCCCCATTACAGAGGGCCTCCTCGGAGTATGGACATCTACTTAGCAAATC
GTCCACCACTCCCGTGGGGGGTACCGTTAAGGGTACCGCCACAAATACGT
CAACGTCGGCCACTCCTAGCGAACGACGGCATATTCACTTCAACAACGAG
GTGGTGCAATGTATCGCTGTCGAGGCGAAAGAGGAAGACGATGGATGGCC
TGTTCATTTTGGGGATGAGTCATCAGAGGATGGTATCGTTATGATGAAAC
ACATCCATTCCGACTCGTCGCTCAGCGACAAAGGTACGCCTCGTGGTAGC
CTTGCTGGCGAAAACAAAACCATCGCCCCGCTTCCTTCCACCACACTCAA
GTACCGATGGGATGCGTCAGATCATCCGGATTTGCAAGATTGTCGAGGGG
ATGCCCGTGCGAACCGACAATCCACATCAGAATCGCCAGCATCCTCAATA
ATGGGTCGGTGGTCCAGCTACTTCTCAAACTCCACGTCTCCTACTTCATC
CGGAGCCGAGAAATCGACGCGGACAAATGGACGATCTGGCAGGAACATTG
CACCATCTGCCAATTTTCTGCTTGATGAAGAAGAGAATGACATGGAATTT
GACTGGGAACCAAGCCGCAACTCATATGGCCTAGGGAGTCTAAGCCGTCC
TTGGTTTGTGAATCCAGAAGATGATGAGGAGCTCGATTACTACTTCCATT
CGATGTCTCCGGGAGGAATGACACCCAATGAAGAAGATGATGAACCATTG
AGTGCAAGCATCTTTGACCGTGTGGCGGACACCGTAAACACAGCCAAGGA
TATTGCACATGTGATATGGAACGTCGGCTGGCGGCGGTGAATGACGGCCA
TACTTCCCGCCTCGAATGAGGGGCGCTCACGCTTCTCTCCGGACCCTTTG
CGAAGTCCAATCACTCAAACCTACTTCCTCGAAGAGCCCAATGTTGCTAC
GGCCAAGTTCAATCTGCCCGCATACCATCGCAAGGATCGTTCTGATGCCG
TGGTGTCCTCGCCGTCGCGGTCAGAGTCTCCATCCCCAGATTTCACTATT
ACAGCAGTGGGGAATCTCCCTCCCACGCCTGCATCTCTGAGCAGTTTATC
TCTTATGAGTGAGGACCATGATGACGACGAGTTGGTTCTACCTTCGTACG
ATTCCAGTCAATTCGCACAAAAGGAGCCCGAAGCCCTCAGTGATGTGTCT
GTGGACTCCTCGGCGGACTTTGCACGCTTGACACAGGCACCAGCTGCTGA
TGATAGTACGATCGAGGACGAGCCATCGAGGCATGTGGATTACCTTTCTC
ATGAATGGAGACAAGAGGATATTTGGGCGTCGTGGCGTTATGTCGTGGCT
CGGAGGAACGTTTACGATAATGGGACAAGGCTAGAGAATGCCTCGTGGAG
GACGTGGGCTAAGCTGAAACTCAATCTGGGCACAGTATCGCCAGAAGCCC
TCAACTGGCTGAAGGACTGCGATGTAACGTGGTTGTACGGACCCTTAAAG
ACATCCAATAAGCGGGAGAAGGCATTCAATGGCTCTCCTCCTCCCAGCCG
TCTAGAGACACCTACCTTATATCCGGATAGGAAACCGATTCTGAAGAAGA
GGACGGCTTCTGAGACTATCTTGCAGCGTTCTCTGTCCCAGCATACACTC
TTGCAACATGCGGGTGCCATTCTAAAAGCACAGGAGGCTGAAATCAACCG
TAATCGTCCCCCATTACAGAGGGCCTCCTCGGAGTATGGACATCTACTTA
GCAAATCGTCCACCACTCCCGTGGGGGGTACCGTTAAGGGTACCGCCACA
AATACGTCAACGTCGGCCACTCCTAGCGAACGACGGCATATTCACTTCAA
CAACGAGGTGGTGCAATGTATCGCTGTCGAGGCGAAAGAGGAAGACGATG
GATGGCCTGTTCATTTTGGGGATGAGTCATCAGAGGATGGTATCGTTATG
ATGAAACACATCCATTCCGACTCGTCGCTCAGCGACAAAGGTACGCCTCG
TGGTAGCCTTGCTGGCGAAAACAAAACCATCGCCCCGCTTCCTTCCACCA
CACTCAAGTACCGATGGGATGCGTCAGATCATCCGGATTTGCAAGATTGT
CGAGGGGATGCCCGTGCGAACCGACAATCCACATCAGAATCGCCAGCATC
CTCAATAATGGGTCGGTGGTCCAGCTACTTCTCAAACTCCACGTCTCCTA
CTTCATCCGGAGCCGAGAAATCGACGCGGACAAATGGACGATCTGGCAGG
AACATTGCACCATCTGCCAATTTTCTGCTTGATGAAGAAGAGAATGACAT
GGAATTTGACTGGGAACCAAGCCGCAACTCATATGGCCTAGGGAGTCTAA
GCCGTCCTTGGTTTGTGAATCCAGAAGATGATGAGGAGCTCGATTACTAC
TTCCATTCGATGTCTCCGGGAGGAATGACACCCAATGAAGAAGATGATGA
ACCATTGAGTGCAAGCATCTTTGACCGTGTGGCGGACACCGTAAACACAG
CCAAGGATATTGCACATGTGATATGGAACGTCGGCTGGCGGCGGTGAATG
ACGGCCATACTTCCCGCCTCGAATGAGGGGCGCTCACGCTTCTCTCCGGA
CCCTTTGCGAAGTCCAATCACTCAAACCTACTTCCTCGAAGAGCCCAATG
TTGCTACGGCCAAGTTCAATCTGCCCGCATACCATCGCAAGGATCGTTCT
GATGCCGTGGTGTCCTCGCCGTCGCGGTCAGAGTCTCCATCCCCAGATTT
CACTATTACAGCAGTGGGGAATCTCCCTCCCACGCCTGCATCTCTGAGCA
GTTTATCTCTTATGAGTGAGGACCATGATGACGACGAGTTGGTTCTACCT
TCGTACGATTCCAGTCAATTCGCACAAAAGGAGCCCGAAGCCCTCAGTGA
TGTGTCTGTGGACTCCTCGGCGGACTTTGCACGCTTGACACAGGCACCAG
CTGCTGATGATAGTACGATCGAGGACGAGCCATCGAGGCATGTGGATTAC
CTTTCTCATGAATGGAGACAAGAGGATATTTGGGCGTCGTGGCGTTATGT
CGTGGCTCGGAGGAACGTTTACGATAATGGGACAAGGCTAGAGAATGCCT
CGTGGAGGACGTGGGCTAAGCTGAAACTCAATCTGGGCACAGTATCGCCA
GAAGCCCTCAACTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008308-T1.utr3p1 | KJC3_008308-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008308-T1.utr5p1 | KJC3_008308-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013860 |
| DBxref | PFAM:PF08550 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1562545..1565849 - |
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