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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1572052..1573528- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008310-T1 ID=KJC3_008310-T1|Name=KJC3_008310-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1477bp|location=Sequence derived from alignment at ch6:1572052..1573528- (Aspergillus niger KJC3)
AGTTGACCAACGCGTTGAGCAGCGTTATCGGGTCAGGGCGTGCAAGGAAA
GTGGAGAGGGTTCACCGACCTGGATCCTTCCTGCCCGCCATGGTTTCCCA
ACCGTCCAAACAGCTGTCCGCTCCTTACCCACCGGCCCATGGCTCTGGAG
CCGCCGGAAGCCAGAAACCAGCACCACCCAGCTTGCAGCCCTCCAGTGCC
ACCAGCGACCATAGCGAAAGTCTCCAACTCGGCCAGAATCATCATGGTCG
CGAAGTGTCTCAACCTCCCGGTCTTACTGGAGAAAAGCATCACCACCATC
ATCTGACCTTCGACACTACCCGCTCAGATCGCGCGAAGTCTAAATCCCGT
TCGAAGCACAAGCACAAGCACAGTAAATCCGGCGACTTTCGGTTTCACCG
AAGAATGAACAACCTCGCATCGTCCGCTGGTTCCAGAGGTCTCTTGCCAA
CATGGTCCGGTAGTAAGGAAAAGGACAATGATGCCGACGATGGCTTGCTT
AGACCCATAACGCAGGAGACAACCTGGTCGCGCTGGAGCTCGGATTCCAC
CGCAGCATTGGGTAGTGGGAGCCGAAAGGGCAGTTTGCTTGATGTCATAG
ACCCGAGCAACAAGCTTGGTCCCATTAGGCGTCAAGAGATACGGTCGATG
GAAGACCTGGAGCAGGTGAAGAGTAAACGAAAACAAGGGGAGGAGTAAGT
CGACTGTTGTCTGTTCACATCTGGGATGATTTTGACTGGTTTGATGACAG
GTATTTACGGTCTGCCCTGTCAATGATCGGGACCCTTGCAACGGATATCA
CCCGTAGACTGGATTATACGTACTACAACCTCCTGGAGAAGCTTGCCGCA
TTGAATTCTACCATCGCGTCATTCCAGGAGCTTTCTAGTTCTACCTCTGC
CCTTTTTGACGACTTCCAGCGGGAGACATCGGGCTTGGACAAGGAAATCC
GGAAACAAATGGGGGAATTAAAAGAGTTTCAGCCCCAATTAGAGAGGATT
AAGACGTTGGAAGGTCGCATGAAGACGGGGCGACAGAGGGCCGAGGGACT
TAACAATCGGCTCGCGGCAATGCGCCATGAAATTGATCGCTGGGATAAGA
AAGAACTAGAATGGCAGTCACGAGTTAATCGCCGCCTTCGGGTCTTTTGG
ACTGTGGTGGTAGCTGGTATGCTTGCAGTTCTCCTCGCCATTGCGATTCA
AAATTGGCCAACTGTGATGGGCCCGGACTCTTCCGGATTACCTTCGCAAG
CGTTGTTTCTGACAAATTCGTCGCATGCTCTACCTCCGGAGAATGATCGT
GGGGCGGAGTCAGATAGCTCCAGGGAAGCTTGGCCACGATCTCTGCGGAA
TCTCCCTTATCGCCATACTAACCGGCCCTCTGGAGGATCAGTTCCCGTCG
TAGCGACGGCTACCAGAGATGATACCAACGTCAGGACTACTGATCCAGAC
CCACTGACGATATTTGATGAGCTATGA back to topCoding sequence (CDS) from alignment at ch6:1572052..1573528- >KJC3_008310-T1 ID=KJC3_008310-T1|Name=KJC3_008310-T1|organism=Aspergillus niger KJC3|type=CDS|length=2664bp|location=Sequence derived from alignment at ch6:1572052..1573528- (Aspergillus niger KJC3)
GTATTTACGGTCTGCCCTGTCAATGATCGGGACCCTTGCAACGGATATCA
CCCGTAGACTGGATTATACGTACTACAACCTCCTGGAGAAGCTTGCCGCA
TTGAATTCTACCATCGCGTCATTCCAGGAGCTTTCTAGTTCTACCTCTGC
CCTTTTTGACGACTTCCAGCGGGAGACATCGGGCTTGGACAAGGAAATCC
GGAAACAAATGGGGGAATTAAAAGAGTTTCAGCCCCAATTAGAGAGGATT
AAGACGTTGGAAGGTCGCATGAAGACGGGGCGACAGAGGGCCGAGGGACT
TAACAATCGGCTCGCGGCAATGCGCCATGAAATTGATCGCTGGGATAAGA
AAGAACTAGAATGGCAGTCACGAGTTAATCGCCGCCTTCGGGTCTTTTGG
ACTGTGGTGGTAGCTGGTATGCTTGCAGTTCTCCTCGCCATTGCGATTCA
AAATTGGCCAACTGTGATGGGCCCGGACTCTTCCGGATTACCTTCGCAAG
CGTTGTTTCTGACAAATTCGTCGCATGCTCTACCTCCGGAGAATGATCGT
GGGGCGGAGTCAGATAGCTCCAGGGAAGCTTGGCCACGATCTCTGCGGAA
TCTCCCTTATCGCCATACTAACCGGCCCTCTGGAGGATCAGTTCCCGTCG
TAGCGACGGCTACCAGAGATGATACCAACGTCAGGACTACTGATCCAGAC
CCACTGACGATATTTGATGAGCTATGAATGGTTTCCCAACCGTCCAAACA
GCTGTCCGCTCCTTACCCACCGGCCCATGGCTCTGGAGCCGCCGGAAGCC
AGAAACCAGCACCACCCAGCTTGCAGCCCTCCAGTGCCACCAGCGACCAT
AGCGAAAGTCTCCAACTCGGCCAGAATCATCATGGTCGCGAAGTGTCTCA
ACCTCCCGGTCTTACTGGAGAAAAGCATCACCACCATCATCTGACCTTCG
ACACTACCCGCTCAGATCGCGCGAAGTCTAAATCCCGTTCGAAGCACAAG
CACAAGCACAGTAAATCCGGCGACTTTCGGTTTCACCGAAGAATGAACAA
CCTCGCATCGTCCGCTGGTTCCAGAGGTCTCTTGCCAACATGGTCCGGTA
GTAAGGAAAAGGACAATGATGCCGACGATGGCTTGCTTAGACCCATAACG
CAGGAGACAACCTGGTCGCGCTGGAGCTCGGATTCCACCGCAGCATTGGG
TAGTGGGAGCCGAAAGGGCAGTTTGCTTGATGTCATAGACCCGAGCAACA
AGCTTGGTCCCATTAGGCGTCAAGAGATACGGTCGATGGAAGACCTGGAG
CAGGTGAAGAGTAAACGAAAACAAGGGGAGGAGTATTTACGGTCTGCCCT
GTCAATGATCGGGACCCTTGCAACGGATATCACCCGTAGACTGGATTATA
CGTACTACAACCTCCTGGAGAAGCTTGCCGCATTGAATTCTACCATCGCG
TCATTCCAGGAGCTTTCTAGTTCTACCTCTGCCCTTTTTGACGACTTCCA
GCGGGAGACATCGGGCTTGGACAAGGAAATCCGGAAACAAATGGGGGAAT
TAAAAGAGTTTCAGCCCCAATTAGAGAGGATTAAGACGTTGGAAGGTCGC
ATGAAGACGGGGCGACAGAGGGCCGAGGGACTTAACAATCGGCTCGCGGC
AATGCGCCATGAAATTGATCGCTGGGATAAGAAAGAACTAGAATGGCAGT
CACGAGTTAATCGCCGCCTTCGGGTCTTTTGGACTGTGGTGGTAGCTGGT
ATGCTTGCAGTTCTCCTCGCCATTGCGATTCAAAATTGGCCAACTGTGAT
GGGCCCGGACTCTTCCGGATTACCTTCGCAAGCGTTGTTTCTGACAAATT
CGTCGCATGCTCTACCTCCGGAGAATGATCGTGGGGCGGAGTCAGATAGC
TCCAGGGAAGCTTGGCCACGATCTCTGCGGAATCTCCCTTATCGCCATAC
TAACCGGCCCTCTGGAGGATCAGTTCCCGTCGTAGCGACGGCTACCAGAG
ATGATACCAACGTCAGGACTACTGATCCAGACCCACTGACGATATTTGAT
GAGCTATGAATGGTTTCCCAACCGTCCAAACAGCTGTCCGCTCCTTACCC
ACCGGCCCATGGCTCTGGAGCCGCCGGAAGCCAGAAACCAGCACCACCCA
GCTTGCAGCCCTCCAGTGCCACCAGCGACCATAGCGAAAGTCTCCAACTC
GGCCAGAATCATCATGGTCGCGAAGTGTCTCAACCTCCCGGTCTTACTGG
AGAAAAGCATCACCACCATCATCTGACCTTCGACACTACCCGCTCAGATC
GCGCGAAGTCTAAATCCCGTTCGAAGCACAAGCACAAGCACAGTAAATCC
GGCGACTTTCGGTTTCACCGAAGAATGAACAACCTCGCATCGTCCGCTGG
TTCCAGAGGTCTCTTGCCAACATGGTCCGGTAGTAAGGAAAAGGACAATG
ATGCCGACGATGGCTTGCTTAGACCCATAACGCAGGAGACAACCTGGTCG
CGCTGGAGCTCGGATTCCACCGCAGCATTGGGTAGTGGGAGCCGAAAGGG
CAGTTTGCTTGATGTCATAGACCCGAGCAACAAGCTTGGTCCCATTAGGC
GTCAAGAGATACGGTCGATGGAAGACCTGGAGCAGGTGAAGAGTAAACGA
AAACAAGGGGAGGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008310-T1.utr5p1 | KJC3_008310-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1572052..1573528 - |
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