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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1590612..1592145+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008317-T1 ID=KJC3_008317-T1|Name=KJC3_008317-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1534bp|location=Sequence derived from alignment at ch6:1590612..1592145+ (Aspergillus niger KJC3)
AGACTATTTACCGATCATGTATACGGAGCACTTGGGGTTGCCCAAGCTCG
CATCCCATCCGGTCCTTCGGAGGTCAAGACCCACCACTAACCACGGCCGC
CTGGACATCCGAACTTAGTACTTTACTACGTACTTATAATACCCATACGA
ATTACACACCCTCAACCATCTTCTAAACTTCCGGGAGTCACTCTGCGCTA
GCGCCCGCAGATAACAAGACATGGTTACGCAGCGTGATAGAGAACTATTT
AGGGAAGATATTCGCTCTCGAGGAACGAAGCTCAATGCTGCCGAGCGCGA
GAATCTGCTAAGGCCATATCTGCCAGATCCGTCTGACCTTCCACGCAAGC
CACCTCAGCGGCGCAAGAAGGTTCCTCGGAAGACTCCAATACGGACATTT
ATCAAGTCACAGTTGCATCTCCTTACATACACTGTTGTTCACATCATCTT
TGGTATCTTTTCTCGTCTCATTTTGAGCTACTATGCTGTTGTGGATCGAA
TCTTCGCCATCGTCTATTACCACCACCGAACGCCTGAGTTAATACGAAAG
GATGTGAAAGGCCTAAAGCGCTTACCCGAACATCTGAGCGTCATCTTATC
ACTGCGCAAAGAAGATGATGCCCTTGCAATTCTGATGGATGAAGTGGCGG
AGCTTTCAGCCTGGAGCGTGAGTTCTGGGATACCTGTCCTAAGTGTTTAT
GAGAAGACCGGTAGGTGATGTCTCCGAGTTCCCAAGACCCCTACGTATAC
AATAAGAAAGCAAAAAAGGAAGGCAAGGTTAGAGCTAATAATACATGCAT
CTATCTAGGTGTTTTGAAGTCTTGCATCCCTGTCCTTCACCAAGCTATCA
CGAGCAAGTTGTCATCTTACTATGGGTCTCCGGCGCAGCAACCTACACTG
CAACTGTTTGCCCCACACCACCCTATTTATAATACACAGCAAGATGTTCC
GCCGTCCGATAGGCACAATGCCAGTTCTCTCACATTGCTTCTCCTGTCTG
CCACTGACGGCAGGGAAACGTTTGTTGACTTGACCAAGACATTGGCGGAG
ATGTCACAAAGTGGTAAATTGTCTCCAGAGGACATCACTATGGAATTGGT
GGATGCAGAAATCAGTGAGATCACCACTCAGCCAACCCAACCGACAGCAC
CTGTCAATCAAGGCAGCACAAGAATGGGCCTCAGCCGCCAGGTCTCCCTA
GTGAAGCCTGAGCCTGATCTTCTCCTTGTTTTTGGTTCGTTTTTAAAGCT
GGATGGATACCCGCCTTGGCATATCCGCCTCACTGAAATGTACTGCACCG
GTGGTAGGAATAGCGGGATAACGAATTCCGACGAGGCTGTTGAGTACCAC
GGGTTCCTCAGGGGCCTATGGCACTACGCCGGGGCTCAGATGAGATTCGG
CCGTTGATGGTAACTTTTTTTTCTCTCTCGTGACTGTCCAAAGCGACCCT
TGTTATATACTGGAGTTTCATTCGATCTATAAATTGAAAGAAAGCGGGCA
CTAGCCTCGGCATATCTATACAACTGGATGATCG back to topCoding sequence (CDS) from alignment at ch6:1590612..1592145+ >KJC3_008317-T1 ID=KJC3_008317-T1|Name=KJC3_008317-T1|organism=Aspergillus niger KJC3|type=CDS|length=2178bp|location=Sequence derived from alignment at ch6:1590612..1592145+ (Aspergillus niger KJC3)
ATGGTTACGCAGCGTGATAGAGAACTATTTAGGGAAGATATTCGCTCTCG
AGGAACGAAGCTCAATGCTGCCGAGCGCGAGAATCTGCTAAGGCCATATC
TGCCAGATCCGTCTGACCTTCCACGCAAGCCACCTCAGCGGCGCAAGAAG
GTTCCTCGGAAGACTCCAATACGGACATTTATCAAGTCACAGTTGCATCT
CCTTACATACACTGTTGTTCACATCATCTTTGGTATCTTTTCTCGTCTCA
TTTTGAGCTACTATGCTGTTGTGGATCGAATCTTCGCCATCGTCTATTAC
CACCACCGAACGCCTGAGTTAATACGAAAGGATGTGAAAGGCCTAAAGCG
CTTACCCGAACATCTGAGCGTCATCTTATCACTGCGCAAAGAAGATGATG
CCCTTGCAATTCTGATGGATGAAGTGGCGGAGCTTTCAGCCTGGAGCGTG
AGTTCTGGGATACCTGTCCTAAGTGTTTATGAGAAGACCGGTGTTTTGAA
GTCTTGCATCCCTGTCCTTCACCAAGCTATCACGAGCAAGTTGTCATCTT
ACTATGGGTCTCCGGCGCAGCAACCTACACTGCAACTGTTTGCCCCACAC
CACCCTATTTATAATACACAGCAAGATGTTCCGCCGTCCGATAGGCACAA
TGCCAGTTCTCTCACATTGCTTCTCCTGTCTGCCACTGACGGCAGGGAAA
CGTTTGTTGACTTGACCAAGACATTGGCGGAGATGTCACAAAGTGGTAAA
TTGTCTCCAGAGGACATCACTATGGAATTGGTGGATGCAGAAATCAGTGA
GATCACCACTCAGCCAACCCAACCGACAGCACCTGTCAATCAAGGCAGCA
CAAGAATGGGCCTCAGCCGCCAGGTCTCCCTAGTGAAGCCTGAGCCTGAT
CTTCTCCTTGTTTTTGGTTCGTTTTTAAAGCTGGATGGATACCCGCCTTG
GCATATCCGCCTCACTGAAATGTACTGCACCGGTGGTAGGAATAGCGGGA
TAACGAATTCCGACGAGGCTGTTGAGTACCACGGGTTCCTCAGGGGCCTA
TGGCACTACGCCGGGGCTCAGATGAGATTCGGCCGTTGAATGGTTACGCA
GCGTGATAGAGAACTATTTAGGGAAGATATTCGCTCTCGAGGAACGAAGC
TCAATGCTGCCGAGCGCGAGAATCTGCTAAGGCCATATCTGCCAGATCCG
TCTGACCTTCCACGCAAGCCACCTCAGCGGCGCAAGAAGGTTCCTCGGAA
GACTCCAATACGGACATTTATCAAGTCACAGTTGCATCTCCTTACATACA
CTGTTGTTCACATCATCTTTGGTATCTTTTCTCGTCTCATTTTGAGCTAC
TATGCTGTTGTGGATCGAATCTTCGCCATCGTCTATTACCACCACCGAAC
GCCTGAGTTAATACGAAAGGATGTGAAAGGCCTAAAGCGCTTACCCGAAC
ATCTGAGCGTCATCTTATCACTGCGCAAAGAAGATGATGCCCTTGCAATT
CTGATGGATGAAGTGGCGGAGCTTTCAGCCTGGAGCGTGAGTTCTGGGAT
ACCTGTCCTAAGTGTTTATGAGAAGACCGGTGTTTTGAAGTCTTGCATCC
CTGTCCTTCACCAAGCTATCACGAGCAAGTTGTCATCTTACTATGGGTCT
CCGGCGCAGCAACCTACACTGCAACTGTTTGCCCCACACCACCCTATTTA
TAATACACAGCAAGATGTTCCGCCGTCCGATAGGCACAATGCCAGTTCTC
TCACATTGCTTCTCCTGTCTGCCACTGACGGCAGGGAAACGTTTGTTGAC
TTGACCAAGACATTGGCGGAGATGTCACAAAGTGGTAAATTGTCTCCAGA
GGACATCACTATGGAATTGGTGGATGCAGAAATCAGTGAGATCACCACTC
AGCCAACCCAACCGACAGCACCTGTCAATCAAGGCAGCACAAGAATGGGC
CTCAGCCGCCAGGTCTCCCTAGTGAAGCCTGAGCCTGATCTTCTCCTTGT
TTTTGGTTCGTTTTTAAAGCTGGATGGATACCCGCCTTGGCATATCCGCC
TCACTGAAATGTACTGCACCGGTGGTAGGAATAGCGGGATAACGAATTCC
GACGAGGCTGTTGAGTACCACGGGTTCCTCAGGGGCCTATGGCACTACGC
CGGGGCTCAGATGAGATTCGGCCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008317-T1.utr5p1 | KJC3_008317-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008317-T1.utr3p1 | KJC3_008317-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264W7W |
| DBxref | InterPro:IPR036424 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1590612..1592145 + |
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