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KJC3_008318-T1, KJC3_008318-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008318-T1
Unique NameKJC3_008318-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1592310..1593510-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008318-T1 ID=KJC3_008318-T1|Name=KJC3_008318-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1201bp|location=Sequence derived from alignment at ch6:1592310..1593510- (Aspergillus niger KJC3)
CTTGTTATTCCATTCATCGAACACCACACTCGCCCTTTACCTTGTGGTGG
CTGCTTTCTCGCGTGCATTACAATAGCTCGCATGCGTTGATGTTTCAGTT
TAAATGCTGTGGCTACTTTACATTCTTGCTTCATGACATTCTATTTCCTT
CCGCCGACAAATCAGTCTGAATATTGTACAGCGACGACAGTTTATGATCC
CATGCCACACCTCCCAATCGTTCAATGTGATGCCTCTATCACGACCCAAA
ACATAAGAAAGCGAAAAAGAGAAACAGTTTTGGCAGATATCTCCCCAGCT
CTATCAAACAGGTCTGCAATGAATCAATGAAGCGGCCAGTATCGCTGAAC
GCAACAAGTGGAAGTGGCTAACTCATATCATCGATTATTCAGGCTTTCCT
CATCGGCCATCCACGATACGAACCCGCAATTCTGCTTAGACAATACAGGA
TGTTTAGGCGACAGCACAGGAGTCTTCACTCGCCAGCGATGTCTCCACAG
GAAACGACGAGTTTTCCAGCAGCCACCTGCTAACCATAAGCCACCGTTCA
CAGATGGTATTTCTCAAATGCCACTGTCGGATTCGTCGCAAAACACTTGC
ATTTCTGGAGCCTGCTCCCCGCCAGTATCTCCTAAAACAATATGCCCAAT
CCCATATCAGCAGCCGCAAACACTATGTGCATCTGCGTCCTGCCTCCGCC
CATGTCATATCTGCCACCGGAGACCGACTACTCGAGAGTATGTTGACGCT
TATGCAGATTGTGATCTCTGTGGTGGGAGAAGCTGCTACATCTGTTTACG
ACATTGTGACTCTGTAGATTGCAGCGGGCTTCTCAGGACCCCTACAAGCG
GTCTTCAGGAAAGGCCTGATGACGACGAATGGCAGACAGAGCGGGCACGC
AAGGTTTGCTCTGCTTGTGCAGTCGAAGGTGTCACCGAATCTGGAAAGGA
AGTAATAAGATGCCTTGAATGTGTACGAGGCCTCCAGTCCCAATGGCAAG
CTCTTCCTCTAGACTAGGAGAACTACATGTGGGCTTGGAACAGATCCTGC
GTGGATAACGTGAGGCAGTGGACTGATATCGGTTGGCGGACTCATCGAGT
TTCTTGAAAGACACCCTGTCCGAACCTTAATATGTAATCATAGAAGATGG
AAATTTTGATACCCGACTTAGCAGACTAATAATGACTTATATGAGGCATC
C
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Coding sequence (CDS) from alignment at ch6:1592310..1593510-

>KJC3_008318-T1 ID=KJC3_008318-T1|Name=KJC3_008318-T1|organism=Aspergillus niger KJC3|type=CDS|length=1608bp|location=Sequence derived from alignment at ch6:1592310..1593510- (Aspergillus niger KJC3)
GCTTTCCTCATCGGCCATCCACGATACGAACCCGCAATTCTGCTTAGACA
ATACAGGATGTTTAGGCGACAGCACAGGAGTCTTCACTCGCCAGCGATGT
CTCCACAGGAAACGACGAGTTTTCCAGCAGCCACCTGCTAACCATAAGCC
ACCGTTCACAGATGGTATTTCTCAAATGCCACTGTCGGATTCGTCGCAAA
ACACTTGCATTTCTGGAGCCTGCTCCCCGCCAGTATCTCCTAAAACAATA
TGCCCAATCCCATATCAGCAGCCGCAAACACTATGTGCATCTGCGTCCTG
CCTCCGCCCATGTCATATCTGCCACCGGAGACCGACTACTCGAGAGTATG
TTGACGCTTATGCAGATTGTGATCTCTGTGGTGGGAGAAGCTGCTACATC
TGTTTACGACATTGTGACTCTGTAGATTGCAGCGGGCTTCTCAGGACCCC
TACAAGCGGTCTTCAGGAAAGGCCTGATGACGACGAATGGCAGACAGAGC
GGGCACGCAAGGTTTGCTCTGCTTGTGCAGTCGAAGGTGTCACCGAATCT
GGAAAGGAAGTAATAAGATGCCTTGAATGTGTACGAGGCCTCCAGTCCCA
ATGGCAAGCTCTTCCTCTAGACTAGATGACATTCTATTTCCTTCCGCCGA
CAAATCAGTCTGAATATTGTACAGCGACGACAGTTTATGATCCCATGCCA
CACCTCCCAATCGTTCAATGTGATGCCTCTATCACGACCCAAAACATAAG
AAAGCGAAAAAGAGAAACAGTTTTGGCAGATATCTCCCCAGCTCTATCAA
ACAGGCTTTCCTCATCGGCCATCCACGATACGAACCCGCAATTCTGCTTA
GACAATACAGGATGTTTAGGCGACAGCACAGGAGTCTTCACTCGCCAGCG
ATGTCTCCACAGGAAACGACGAGTTTTCCAGCAGCCACCTGCTAACCATA
AGCCACCGTTCACAGATGGTATTTCTCAAATGCCACTGTCGGATTCGTCG
CAAAACACTTGCATTTCTGGAGCCTGCTCCCCGCCAGTATCTCCTAAAAC
AATATGCCCAATCCCATATCAGCAGCCGCAAACACTATGTGCATCTGCGT
CCTGCCTCCGCCCATGTCATATCTGCCACCGGAGACCGACTACTCGAGAG
TATGTTGACGCTTATGCAGATTGTGATCTCTGTGGTGGGAGAAGCTGCTA
CATCTGTTTACGACATTGTGACTCTGTAGATTGCAGCGGGCTTCTCAGGA
CCCCTACAAGCGGTCTTCAGGAAAGGCCTGATGACGACGAATGGCAGACA
GAGCGGGCACGCAAGGTTTGCTCTGCTTGTGCAGTCGAAGGTGTCACCGA
ATCTGGAAAGGAAGTAATAAGATGCCTTGAATGTGTACGAGGCCTCCAGT
CCCAATGGCAAGCTCTTCCTCTAGACTAGATGACATTCTATTTCCTTCCG
CCGACAAATCAGTCTGAATATTGTACAGCGACGACAGTTTATGATCCCAT
GCCACACCTCCCAATCGTTCAATGTGATGCCTCTATCACGACCCAAAACA
TAAGAAAGCGAAAAAGAGAAACAGTTTTGGCAGATATCTCCCCAGCTCTA
TCAAACAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008318KJC3_008318Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008318-T1KJC3_008318-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008318-T1.cdsKJC3_008318-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008318-T1.utr3p1KJC3_008318-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008318-T1.exon2KJC3_008318-T1.exon2Aspergillus niger KJC3exon
KJC3_008318-T1.exon1KJC3_008318-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008318-T1.utr5p1KJC3_008318-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1592310..1593510 -
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