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KJC3_008322-T2, KJC3_008322-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008322-T2
Unique NameKJC3_008322-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1602076..1603892+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008322-T2 ID=KJC3_008322-T2|Name=KJC3_008322-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1817bp|location=Sequence derived from alignment at ch6:1602076..1603892+ (Aspergillus niger KJC3)
CATAATCACATTTCGACCAGAGCCCGACTCTCACGTCACTCTCGTTCCAA
TCGTGCCTTTCCCTTGTCCCTTTCTTTGGCCTCAATTTACTCTTTCGTCT
GATACAGAACACGGCCAGCAAATGTCCGCTCGAAAATTTTCGGTTCATGA
CCGTAACCCCCTTTCGACACAGACAGAGAGTAAACCGAATGTTGACTACA
AGCTCAAAACTACTATAACTTCAGGTAATGGGATAACCAATGTGGGTTCC
GAAAAGGTTCTGAAGCGGGCAAAAAGGAATGATGAGGTTATGGGATCTAC
AGGTGCCACTTCTGGGCACTTAACAAGTGTATTAAGTGCTACCACTCATA
CAGTACTGCCTCAATGGACGAATATTATTCTAATGTCCTCCTTGATTTTT
GGTGGCTGTTGCGCCAATGTGAGTATGTGCCCAGGTATGGCTAGCTTCCG
CTACTAACACCGGATGGTAGGTTTTTGCACTCGAAGCAATCATCAAGTGA
GTGCTTTCGCAACTCGCAAGATTTTGAACGAGACTGACTCCTGTCTAGAG
ACCAGCCAAGCTCTGGTATATAATCTCCATCAAGCAAGCATTGCCATCCC
AGGTTTCTCTAACATCTTCGCTCAAGGTCCTCTGATAACGTTTGCGCAGT
TTCTTCTAACTGCAGTCTTCACGGTTCCAGGCTTTCTCTCTGTGTCAGCG
GGACCGCGTTCACTATATCTTAGTCCACGTGCCATTCCACTAAGATCATG
GATAGTCTACACGGCTTTTTTCGTTACAGTCAATCTTCTCAACAACTGGG
CCTTTGCATACAAGATTTCAGTCCCGTTGCACATTATTCTAAGATCCGGG
GGGCCAGTAGCGTCTATGATTATCGGTTACTTGTTTAATGCTAAGAGATA
TTCGCGAGGGCAAATACTTGCGGTTCTATTGCTTACTTTGGGTGTGGTCA
CTGCTGCTTTGGCAGATGCCAAGGCTAAGGGCCAATCTATGAATGTTGAG
AGCACTTCTGCAACCACGACATTGGTTGGATTCACCATCCTTGCTCTAGC
GATGATACTCTCGGCTTTCCAGGGGATATATGCGGACAGGCTCTACGAAA
AGTACGGCCGAGACCACTGGAAAGAAGCTCTGTTCTACTCTCACACCCTA
TCACTACCGCTGTTTCTACCTGCTTATGCACAACTTGCGAGCCAGTGGCG
GACGCTTTTCCCCACATATCCTCTAACTTCTGGGCCTGAAGTTTTGGGCA
TGACTGGAATGGGTCCTCCGAGCCATGCATCATCGGCCGGTCTTGAAAGC
ATCAGTTCCTCGGAAGAGTCGTGCGAGGGATGGCATTTTGCGTCAATATT
CCGCAGTCTATCGGGGCAGAATCCGATTTTGAAAGATACTTTTCAATTAC
ACTCAATCTTCACGTGTGTTCCAACACGCGTAATCTACCTTTTGATTAAT
GCACTGACGCAGTACTTGTGCATACGAGGAGTCCACCTCCTCTCTGCAAA
ATCGTCTTCTTTGACTGTCACCGTTGTTCTGAATATTCGGAAGCTTGTTT
CCCTCCTCCTCTCCATCTATCTGTTTGGGAATGCCCTTTCACCGGGTGTG
CTCATGGGCGCGTTGTTTGTTTTCATTGGCGGCGCCTTATATGGCTTTGA
GGGTGCGCGCCCCAGGGTGAAATCTGCTAAAAATGATTAAGGCAGTCATG
TTTCGCTAGAATTGTCTTCCCCGTCTTTGTTACGGCTGGGAAGGTGTTCC
AGACGGTAAAGATAGAAAGATGCATATATATTTATATACGTCTGCGTGTG
TTGTGTGTTCGTATGTG
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Coding sequence (CDS) from alignment at ch6:1602076..1603892+

>KJC3_008322-T2 ID=KJC3_008322-T2|Name=KJC3_008322-T2|organism=Aspergillus niger KJC3|type=CDS|length=825bp|location=Sequence derived from alignment at ch6:1602076..1603892+ (Aspergillus niger KJC3)
ATGATTATCGGTTACTTGTTTAATGCTAAGAGATATTCGCGAGGGCAAAT
ACTTGCGGTTCTATTGCTTACTTTGGGTGTGGTCACTGCTGCTTTGGCAG
ATGCCAAGGCTAAGGGCCAATCTATGAATGTTGAGAGCACTTCTGCAACC
ACGACATTGGTTGGATTCACCATCCTTGCTCTAGCGATGATACTCTCGGC
TTTCCAGGGGATATATGCGGACAGGCTCTACGAAAAGTACGGCCGAGACC
ACTGGAAAGAAGCTCTGTTCTACTCTCACACCCTATCACTACCGCTGTTT
CTACCTGCTTATGCACAACTTGCGAGCCAGTGGCGGACGCTTTTCCCCAC
ATATCCTCTAACTTCTGGGCCTGAAGTTTTGGGCATGACTGGAATGGGTC
CTCCGAGCCATGCATCATCGGCCGGTCTTGAAAGCATCAGTTCCTCGGAA
GAGTCGTGCGAGGGATGGCATTTTGCGTCAATATTCCGCAGTCTATCGGG
GCAGAATCCGATTTTGAAAGATACTTTTCAATTACACTCAATCTTCACGT
GTGTTCCAACACGCGTAATCTACCTTTTGATTAATGCACTGACGCAGTAC
TTGTGCATACGAGGAGTCCACCTCCTCTCTGCAAAATCGTCTTCTTTGAC
TGTCACCGTTGTTCTGAATATTCGGAAGCTTGTTTCCCTCCTCCTCTCCA
TCTATCTGTTTGGGAATGCCCTTTCACCGGGTGTGCTCATGGGCGCGTTG
TTTGTTTTCATTGGCGGCGCCTTATATGGCTTTGAGGGTGCGCGCCCCAG
GGTGAAATCTGCTAAAAATGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008322KJC3_008322Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008322-T2KJC3_008322-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008322-T2.utr5p1KJC3_008322-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008322-T2.utr5p2KJC3_008322-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008322-T2.utr5p3KJC3_008322-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008322-T2.exon1KJC3_008322-T2.exon1Aspergillus niger KJC3exon
KJC3_008322-T2.exon2KJC3_008322-T2.exon2Aspergillus niger KJC3exon
KJC3_008322-T2.exon3KJC3_008322-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008322-T2.cdsKJC3_008322-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008322-T2.utr3p1KJC3_008322-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013657
DBxrefPFAM:PF08449
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1602076..1603892 +
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