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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1723550..1724214- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008329-T1 ID=KJC3_008329-T1|Name=KJC3_008329-T1|organism=Aspergillus niger KJC3|type=mRNA|length=665bp|location=Sequence derived from alignment at ch6:1723550..1724214- (Aspergillus niger KJC3)
ATGGCTTTGCCAAAGATCGCCTGTATCGGCGTCATTGGGAAAGCTGTGAG
TCTTCATATCTTTCATTTGCTACGCCAATCTTAATATAGGAATTAGGATA
ATCCACTCCACGTGTCGCTCTTCCCCCCTTATCTGGAGTCCACTATTGAG
TTCTCCTTCATATTGAACTCCTGCCTTGATATCTTTGAAATACGCCGTAA
ACAGACGTCAATTGACCAAGATCTTGGTCTTTTGCAAGCTGTCGATGAGA
GACTCGCAGCATATGGCTGGCTTTCTACAACGGGGGTCAAATTCCTAGTT
ATAGTTGACTTGATCGGGCAGCCCATCGTTGATGAAGATCCGAAAGGTTC
AACTAAGTCGGGGTTAAGGGAATTCGACCTAAAAGCAGTACGTTCTTGTG
TTTCATCATGCATTCGAAGTCCTACATGTTGAATAATCCACAAGATTTTA
GACATCAATCACTAATGGCGCATACCCTACAGGTTTTCCGAACTCTCCAA
ACCGCATATGTGCAGTTGCTACAGAATCCGTTTTATCGACCGGACGAGCA
TACGGCCACAGCGAAAGCCGTGTCATCATACAGTTCGCAGATCACAGATC
AGAGGTTCATCAATGAGGTCAACCGAATCGGAAACTCATGGCTTCCGACT
GTGACTCCCTTTTAA back to topCoding sequence (CDS) from alignment at ch6:1723550..1724214- >KJC3_008329-T1 ID=KJC3_008329-T1|Name=KJC3_008329-T1|organism=Aspergillus niger KJC3|type=CDS|length=1557bp|location=Sequence derived from alignment at ch6:1723550..1724214- (Aspergillus niger KJC3)
GTTTTCCGAACTCTCCAAACCGCATATGTGCAGTTGCTACAGAATCCGTT
TTATCGACCGGACGAGCATACGGCCACAGCGAAAGCCGTGTCATCATACA
GTTCGCAGATCACAGATCAGAGGTTCATCAATGAGGTCAACCGAATCGGA
AACTCATGGCTTCCGACTGTGACTCCCTTTTAAGATAATCCACTCCACGT
GTCGCTCTTCCCCCCTTATCTGGAGTCCACTATTGAGTTCTCCTTCATAT
TGAACTCCTGCCTTGATATCTTTGAAATACGCCGTAAACAGACGTCAATT
GACCAAGATCTTGGTCTTTTGCAAGCTGTCGATGAGAGACTCGCAGCATA
TGGCTGGCTTTCTACAACGGGGGTCAAATTCCTAGTTATAGTTGACTTGA
TCGGGCAGCCCATCGTTGATGAAGATCCGAAAGGTTCAACTAAGTCGGGG
TTAAGGGAATTCGACCTAAAAGCAATGGCTTTGCCAAAGATCGCCTGTAT
CGGCGTCATTGGGAAAGCTGTTTTCCGAACTCTCCAAACCGCATATGTGC
AGTTGCTACAGAATCCGTTTTATCGACCGGACGAGCATACGGCCACAGCG
AAAGCCGTGTCATCATACAGTTCGCAGATCACAGATCAGAGGTTCATCAA
TGAGGTCAACCGAATCGGAAACTCATGGCTTCCGACTGTGACTCCCTTTT
AAGATAATCCACTCCACGTGTCGCTCTTCCCCCCTTATCTGGAGTCCACT
ATTGAGTTCTCCTTCATATTGAACTCCTGCCTTGATATCTTTGAAATACG
CCGTAAACAGACGTCAATTGACCAAGATCTTGGTCTTTTGCAAGCTGTCG
ATGAGAGACTCGCAGCATATGGCTGGCTTTCTACAACGGGGGTCAAATTC
CTAGTTATAGTTGACTTGATCGGGCAGCCCATCGTTGATGAAGATCCGAA
AGGTTCAACTAAGTCGGGGTTAAGGGAATTCGACCTAAAAGCAATGGCTT
TGCCAAAGATCGCCTGTATCGGCGTCATTGGGAAAGCTGTTTTCCGAACT
CTCCAAACCGCATATGTGCAGTTGCTACAGAATCCGTTTTATCGACCGGA
CGAGCATACGGCCACAGCGAAAGCCGTGTCATCATACAGTTCGCAGATCA
CAGATCAGAGGTTCATCAATGAGGTCAACCGAATCGGAAACTCATGGCTT
CCGACTGTGACTCCCTTTTAAGATAATCCACTCCACGTGTCGCTCTTCCC
CCCTTATCTGGAGTCCACTATTGAGTTCTCCTTCATATTGAACTCCTGCC
TTGATATCTTTGAAATACGCCGTAAACAGACGTCAATTGACCAAGATCTT
GGTCTTTTGCAAGCTGTCGATGAGAGACTCGCAGCATATGGCTGGCTTTC
TACAACGGGGGTCAAATTCCTAGTTATAGTTGACTTGATCGGGCAGCCCA
TCGTTGATGAAGATCCGAAAGGTTCAACTAAGTCGGGGTTAAGGGAATTC
GACCTAAAAGCAATGGCTTTGCCAAAGATCGCCTGTATCGGCGTCATTGG
GAAAGCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR006722 |
| DBxref | PFAM:PF04628 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1723550..1724214 - |
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