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KJC3_008331-T1, KJC3_008331-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008331-T1
Unique NameKJC3_008331-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1727655..1729772+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008331-T1 ID=KJC3_008331-T1|Name=KJC3_008331-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2118bp|location=Sequence derived from alignment at ch6:1727655..1729772+ (Aspergillus niger KJC3)
ATGAAGAACCTCGTTCCCGATCACTCTGAAGCTCTTTCTGAAGTCCAAAC
CCATGAACCGATTACTTCGTTCAAATCAGGGTTGACGACTCCCTGGATTT
TCCTCCAACCCACGACTGAGTTGAAAACTACTATCACTGGCTCTGTGAAG
TACTATTTAGATTCGTTGGCTTCGTCGGTCGGCGATTCCCAATGTGCACG
CCAACGCAGGAATAGAAAGCGCAAAAGGTCCGAAGTTGAGGAAAGTTCTA
CAAGCCAGGCCCTGCAGCTCAAGCAACTTTATGTCGATGGCTTTACTTCT
GACCAGATATGGCAACAAGCCCTGAGAATCCTTGATTCTTCAGGTGGTGA
GGTTGAGCGGGATTTTACTTGGTGGTCTGCAGTGTCCAAACCATACGACC
CGCCCCTGACCTCAACTTATGATTTGGCTCTTGATGACGCCGAATTAGAG
GGCAGCAACCTCGACTCTCAGTCAGAGACCGATCTTACCCGATCGAGTAT
CGATGATGACGACCTTAGTTCAGTACACGATCACTCTGAAACCTCCCCCC
ACGATGATTCAGACGTCGAAGAAGACATTGAAAAATTATCCGACAATATT
CCCGGAAACGACATCGACGAAGGTGAACAAGAAACGTATGTGGAGGATCC
CTTCGGCTTGAATGATGGTTTCTTCTCGATAGATGATTTCAACAAGCAAT
CGGAACTACTCGAAAGACAAGACGTTAGTGGTGGTCCAGACAATGATTTT
GAGAGCGAGGATGATGAAATCGATTGGCACGCAAATCCTCTTAGTACGAC
AGGGTCAATGTCTTTATCGAAGGGAGACATGCCACAGGAGAACTCTGACG
GGAATGGTGACGAGAATATGTCTGACAGTGAAGAGGAGGGACCAACATTT
GGGGATGCAGGCCTTGAGGACGATTCCGATATGGACGAAGATAATGTCTA
TGCCACAAACTCCGGAGGCGAAGGTTGGATAAACACTAGCGACATAAAGT
ATTCTGACTTCTTCGCGCCTCCTCCGCGTAAAGTTACTCGCAAAAAGTCT
CGCTCCCTTCCCAAAACTCAGCCTGATATTGCTATTACCAACGACGACGT
TGATCGTGCCATGGCTGATGTTCGCCGTGATCTCTTTGAAGACGAACCTT
CCGGTGAAGACAGTGATGAACATGAAGTAGCGCGAGGATCTCAGATCAAT
TATTCTAGTCATGAGAAGCAGCGTGCTCGCATTGCTGATGAGATTCGCCG
TTTGGAGGCTGCAAACGTTGCCAAGAAGGATTGGATGCTAGCTGGTGAAG
CCAGGGCTGTCGAAAGGCCTGTGAACTCGCTTATTGAAGAAGACCTGGAT
TTCGAAAGAATCGGAAAGCCCGTGCCAGTCGTCACAGCAGAGATGTCAGA
GGATATTGAAGAGCTTATCAAGCGTCGGATTCTCGCCAAACAATTTGACG
AAGTAATACGACGTCGCCCTGGTGTTTCCGACGCACTGAGCGCACGGGGA
AGCCGTCCTGAATTGGAAGATACCAAACCCCAGCAGAGTCTTGCTGAATT
ATATGAGGCCGACCATCTTCGTGCTACTGATCCAAACTTCGTTGACCCTA
AAAATCAGAAGTTGATCCGCGAGCATGCTACTGTGACAAGTTTATGGAAA
GAGATCAGCTCTCAATTAGACACGCTCTCAAACTGGCATTACAAGCCCAA
GGCTCCGCAGGCAAGCATCAATGTTGTCACCGATGTGGCAACAATTACTA
TGGAGGATGCTCAGCCGACAGCCAGCAACGCTGTCAATGGGACGGCAACC
CTTGCGCCGCAGGAGATCTACGCACCTGGCGACGATAACAAAGTCGCTGG
TGAAATGATTTTGAAGAATGGAACGGCAATCGCCAAAGAGGAAATGACCC
GGGAACAAAAGGCTAAGTTGAGGCGAGAGCACAAGAAGCAAATCGCTAGC
ACCGCAAAATCTCAGAAGACAGGGAAAGCGGCTGAGAAACAGCAGCTCAT
GTCGGACTTGAAGAAGGGTGGAGTCAAATTGATTGGAAAGCAGGGCGAAG
TGACGAATATCAATGGCGGTAAAATCAAAGAAGGTGTGAAGGAAGGTGGC
CATGTGCTCAAGCTTTAG
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Coding sequence (CDS) from alignment at ch6:1727655..1729772+

>KJC3_008331-T1 ID=KJC3_008331-T1|Name=KJC3_008331-T1|organism=Aspergillus niger KJC3|type=CDS|length=2118bp|location=Sequence derived from alignment at ch6:1727655..1729772+ (Aspergillus niger KJC3)
ATGAAGAACCTCGTTCCCGATCACTCTGAAGCTCTTTCTGAAGTCCAAAC
CCATGAACCGATTACTTCGTTCAAATCAGGGTTGACGACTCCCTGGATTT
TCCTCCAACCCACGACTGAGTTGAAAACTACTATCACTGGCTCTGTGAAG
TACTATTTAGATTCGTTGGCTTCGTCGGTCGGCGATTCCCAATGTGCACG
CCAACGCAGGAATAGAAAGCGCAAAAGGTCCGAAGTTGAGGAAAGTTCTA
CAAGCCAGGCCCTGCAGCTCAAGCAACTTTATGTCGATGGCTTTACTTCT
GACCAGATATGGCAACAAGCCCTGAGAATCCTTGATTCTTCAGGTGGTGA
GGTTGAGCGGGATTTTACTTGGTGGTCTGCAGTGTCCAAACCATACGACC
CGCCCCTGACCTCAACTTATGATTTGGCTCTTGATGACGCCGAATTAGAG
GGCAGCAACCTCGACTCTCAGTCAGAGACCGATCTTACCCGATCGAGTAT
CGATGATGACGACCTTAGTTCAGTACACGATCACTCTGAAACCTCCCCCC
ACGATGATTCAGACGTCGAAGAAGACATTGAAAAATTATCCGACAATATT
CCCGGAAACGACATCGACGAAGGTGAACAAGAAACGTATGTGGAGGATCC
CTTCGGCTTGAATGATGGTTTCTTCTCGATAGATGATTTCAACAAGCAAT
CGGAACTACTCGAAAGACAAGACGTTAGTGGTGGTCCAGACAATGATTTT
GAGAGCGAGGATGATGAAATCGATTGGCACGCAAATCCTCTTAGTACGAC
AGGGTCAATGTCTTTATCGAAGGGAGACATGCCACAGGAGAACTCTGACG
GGAATGGTGACGAGAATATGTCTGACAGTGAAGAGGAGGGACCAACATTT
GGGGATGCAGGCCTTGAGGACGATTCCGATATGGACGAAGATAATGTCTA
TGCCACAAACTCCGGAGGCGAAGGTTGGATAAACACTAGCGACATAAAGT
ATTCTGACTTCTTCGCGCCTCCTCCGCGTAAAGTTACTCGCAAAAAGTCT
CGCTCCCTTCCCAAAACTCAGCCTGATATTGCTATTACCAACGACGACGT
TGATCGTGCCATGGCTGATGTTCGCCGTGATCTCTTTGAAGACGAACCTT
CCGGTGAAGACAGTGATGAACATGAAGTAGCGCGAGGATCTCAGATCAAT
TATTCTAGTCATGAGAAGCAGCGTGCTCGCATTGCTGATGAGATTCGCCG
TTTGGAGGCTGCAAACGTTGCCAAGAAGGATTGGATGCTAGCTGGTGAAG
CCAGGGCTGTCGAAAGGCCTGTGAACTCGCTTATTGAAGAAGACCTGGAT
TTCGAAAGAATCGGAAAGCCCGTGCCAGTCGTCACAGCAGAGATGTCAGA
GGATATTGAAGAGCTTATCAAGCGTCGGATTCTCGCCAAACAATTTGACG
AAGTAATACGACGTCGCCCTGGTGTTTCCGACGCACTGAGCGCACGGGGA
AGCCGTCCTGAATTGGAAGATACCAAACCCCAGCAGAGTCTTGCTGAATT
ATATGAGGCCGACCATCTTCGTGCTACTGATCCAAACTTCGTTGACCCTA
AAAATCAGAAGTTGATCCGCGAGCATGCTACTGTGACAAGTTTATGGAAA
GAGATCAGCTCTCAATTAGACACGCTCTCAAACTGGCATTACAAGCCCAA
GGCTCCGCAGGCAAGCATCAATGTTGTCACCGATGTGGCAACAATTACTA
TGGAGGATGCTCAGCCGACAGCCAGCAACGCTGTCAATGGGACGGCAACC
CTTGCGCCGCAGGAGATCTACGCACCTGGCGACGATAACAAAGTCGCTGG
TGAAATGATTTTGAAGAATGGAACGGCAATCGCCAAAGAGGAAATGACCC
GGGAACAAAAGGCTAAGTTGAGGCGAGAGCACAAGAAGCAAATCGCTAGC
ACCGCAAAATCTCAGAAGACAGGGAAAGCGGCTGAGAAACAGCAGCTCAT
GTCGGACTTGAAGAAGGGTGGAGTCAAATTGATTGGAAAGCAGGGCGAAG
TGACGAATATCAATGGCGGTAAAATCAAAGAAGGTGTGAAGGAAGGTGGC
CATGTGCTCAAGCTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005732small nucleolar ribonucleoprotein complex
GO:0005634nucleus
GO:0034457Mpp10 complex
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008331KJC3_008331Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008331-T1.exon1KJC3_008331-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008331-T1.cdsKJC3_008331-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008331-T1KJC3_008331-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263ROQ
DBxrefInterPro:IPR012173
DBxrefPFAM:PF04006
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1727655..1729772 +
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