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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1738092..1739873+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008337-T1 ID=KJC3_008337-T1|Name=KJC3_008337-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1782bp|location=Sequence derived from alignment at ch6:1738092..1739873+ (Aspergillus niger KJC3)
CCCGCCCAGTCGGGTTAGGTAGGTGGACACCCTAGGTCGTTTCATGGTCT
CAACCCGTCGACAACTTACCAAAACGCTTCAATACAAGCATAAGGCCAAA
GGGGATCCATTTGAAAACTCTGGCAATTGCTTCTTAGTCTACATCTCCTC
CATACGGAGTCGCCCTACAAAAATGAGCGCCACTACAGAAGACATGATCC
CCGCGCCAGGAGAGTGGCCCGTGGACCCCCAAGCTGATGTACCCATTTCG
GACAATCGTATCTGGGTAGACGGATGCTTTGACTTTAGCCATCATGGTAT
GCCACCCTTTGGTCGTACTTCACACAATGCATTAACAAGGCTGAGTTTTG
TAGGGCATGCGGGTGCTATGCTTCAGGCTCGCCAATTGGGAGACGAGCTT
TATGTCGGTGTCCACTCTGACGAAGCAATCCTCGAGAATAAGGGGCCGAC
AGTTATGACACTGGATGAAAGGTTAGTTTTTCTATATTAAGCATCCCATT
GGCCTTCTGACCAAGTCTAGAGTAGCTGCAGTGGAAGCATGTCGCTGGGT
GACTCGCTGCGTTCCCTCTGCCCCTTACGTGACATTTTTACCTTGGGTAT
CGCACTACGGCTGCAAGTATGTCGTCCATGGTGATGATATCACCTCCGAC
AGCAATGGGGAGGACTGCTACCGGTTTGTCAAAGCTGCAGGGCGCTTTCG
TGTGGTCAAGAGAACGCCGGGGATATCCACGACAGACCTTGTTGGACGAA
TGCTTCTGTGTACGAAGAACCATTTCGTCAAGAGTGTAAAGGATACACTT
AACGGAGAAGAAGGATCTGGAAGTCTGGAAGAGCGCAAGCATTCGGCTGA
TAGCCTCATGAAAAGGATTCGTGATTACGCCACTGACGAGACGGGTCTAC
AGCCTGGCCCGCAGGTTTGGATCTGGAACGGATCGAGTTCTGCGAAACTT
GGGAACACAGTCGAGGAACCTGGTGCATTTGAGACCATTGTAAACGGAAA
GTTGCCAAGGCCGGGGCAGCGAATTATCTATGTTGATGGGGGATTTGACT
TGTTCTCATCCGGGCACATCGAATTCCTTCGACAGGTCTTAACGCAGGAG
GAATCCGAAGGCCGTCGGCGTGGTTGGTATGACCAAGAGCAAAAGATAAA
GAGGGTCAAAGAATACGGAGAGGACTATGGCCCTGCTTATGTTGTTGCTG
GCATACATGACGACGATGTTATAAACCATTGGAAAGGCCTCAACTACCCA
ATCATGAACATCTTTGAACGCGGACTATGCGTTCTGCAGTGTCGCGTATG
TTTTCCAAAAAGTCTGGCACTTTAAAGTGAAGTATCAATCTGCTAACCAG
GTTTTAGTATATACATGCGGTTATCTTTTCCTCGCCGTTCTCCCCAAGTC
AGTCATACCTGGAGGCCATGCCCTTGGGCGTTCCAGATGCAGTTTACCAC
GGTCCTACTACGTTCATACCCCTCACCTATGATCCTTATATGGCACCCAA
GCGGATGGGCATCTTCAAAGAGACATCCAGCCATACGTACCAGCATGTGA
ATGCCGGTGAGATCGTCGACAGGATATTGAAAAGTAGGGAAGCCTATGAA
GAAAGACAGCGCGCCAAACTCGAAAAGGGTGCTGTTGAGGAGTTGGTCAA
GTCCAAAGAGTCGGCATCTGCCTAGATAGCAATATGTATAACAAAACTGG
GCAAGTGCCCTTTCATAGAATACGAGACGATACGTAATATAGAAAACGGA
GGAAGGGAGGGATGCCCGGAGATAGAGAAAAC back to topCoding sequence (CDS) from alignment at ch6:1738092..1739873+ >KJC3_008337-T1 ID=KJC3_008337-T1|Name=KJC3_008337-T1|organism=Aspergillus niger KJC3|type=CDS|length=5856bp|location=Sequence derived from alignment at ch6:1738092..1739873+ (Aspergillus niger KJC3)
ATGGTCTCAACCCGTCGACAACTTACCAAAACGCTTCAATACAAGCATAA
GGCCAAAGGGGATCCATTTGAAAACTCTGGCAATTGCTTCTTAGTCTACA
TCTCCTCCATACGGAGTCGCCCTACAAAAATGAGCGCCACTACAGAAGAC
ATGATCCCCGCGCCAGGAGAGTGGCCCGTGGACCCCCAAGCTGATGTACC
CATTTCGGACAATCGTATCTGGGTAGACGGATGCTTTGACTTTAGCCATC
ATGGGCATGCGGGTGCTATGCTTCAGGCTCGCCAATTGGGAGACGAGCTT
TATGTCGGTGTCCACTCTGACGAAGCAATCCTCGAGAATAAGGGGCCGAC
AGTTATGACACTGGATGAAAGAGTAGCTGCAGTGGAAGCATGTCGCTGGG
TGACTCGCTGCGTTCCCTCTGCCCCTTACGTGACATTTTTACCTTGGGTA
TCGCACTACGGCTGCAAGTATGTCGTCCATGGTGATGATATCACCTCCGA
CAGCAATGGGGAGGACTGCTACCGGTTTGTCAAAGCTGCAGGGCGCTTTC
GTGTGGTCAAGAGAACGCCGGGGATATCCACGACAGACCTTGTTGGACGA
ATGCTTCTGTGTACGAAGAACCATTTCGTCAAGAGTGTAAAGGATACACT
TAACGGAGAAGAAGGATCTGGAAGTCTGGAAGAGCGCAAGCATTCGGCTG
ATAGCCTCATGAAAAGGATTCGTGATTACGCCACTGACGAGACGGGTCTA
CAGCCTGGCCCGCAGGTTTGGATCTGGAACGGATCGAGTTCTGCGAAACT
TGGGAACACAGTCGAGGAACCTGGTGCATTTGAGACCATTGTAAACGGAA
AGTTGCCAAGGCCGGGGCAGCGAATTATCTATGTTGATGGGGGATTTGAC
TTGTTCTCATCCGGGCACATCGAATTCCTTCGACAGGTCTTAACGCAGGA
GGAATCCGAAGGCCGTCGGCGTGGTTGGTATGACCAAGAGCAAAAGATAA
AGAGGGTCAAAGAATACGGAGAGGACTATGGCCCTGCTTATGTTGTTGCT
GGCATACATGACGACGATGTTATAAACCATTGGAAAGGCCTCAACTACCC
AATCATGAACATCTTTGAACGCGGACTATGCGTTCTGCAGTGTCGCTATA
TACATGCGGTTATCTTTTCCTCGCCGTTCTCCCCAAGTCAGTCATACCTG
GAGGCCATGCCCTTGGGCGTTCCAGATGCAGTTTACCACGGTCCTACTAC
GTTCATACCCCTCACCTATGATCCTTATATGGCACCCAAGCGGATGGGCA
TCTTCAAAGAGACATCCAGCCATACGTACCAGCATGTGAATGCCGGTGAG
ATCGTCGACAGGATATTGAAAAGTAGGGAAGCCTATGAAGAAAGACAGCG
CGCCAAACTCGAAAAGGGTGCTGTTGAGGAGTTGGTCAAGTCCAAAGAGT
CGGCATCTGCCTAGATGGTCTCAACCCGTCGACAACTTACCAAAACGCTT
CAATACAAGCATAAGGCCAAAGGGGATCCATTTGAAAACTCTGGCAATTG
CTTCTTAGTCTACATCTCCTCCATACGGAGTCGCCCTACAAAAATGAGCG
CCACTACAGAAGACATGATCCCCGCGCCAGGAGAGTGGCCCGTGGACCCC
CAAGCTGATGTACCCATTTCGGACAATCGTATCTGGGTAGACGGATGCTT
TGACTTTAGCCATCATGGGCATGCGGGTGCTATGCTTCAGGCTCGCCAAT
TGGGAGACGAGCTTTATGTCGGTGTCCACTCTGACGAAGCAATCCTCGAG
AATAAGGGGCCGACAGTTATGACACTGGATGAAAGAGTAGCTGCAGTGGA
AGCATGTCGCTGGGTGACTCGCTGCGTTCCCTCTGCCCCTTACGTGACAT
TTTTACCTTGGGTATCGCACTACGGCTGCAAGTATGTCGTCCATGGTGAT
GATATCACCTCCGACAGCAATGGGGAGGACTGCTACCGGTTTGTCAAAGC
TGCAGGGCGCTTTCGTGTGGTCAAGAGAACGCCGGGGATATCCACGACAG
ACCTTGTTGGACGAATGCTTCTGTGTACGAAGAACCATTTCGTCAAGAGT
GTAAAGGATACACTTAACGGAGAAGAAGGATCTGGAAGTCTGGAAGAGCG
CAAGCATTCGGCTGATAGCCTCATGAAAAGGATTCGTGATTACGCCACTG
ACGAGACGGGTCTACAGCCTGGCCCGCAGGTTTGGATCTGGAACGGATCG
AGTTCTGCGAAACTTGGGAACACAGTCGAGGAACCTGGTGCATTTGAGAC
CATTGTAAACGGAAAGTTGCCAAGGCCGGGGCAGCGAATTATCTATGTTG
ATGGGGGATTTGACTTGTTCTCATCCGGGCACATCGAATTCCTTCGACAG
GTCTTAACGCAGGAGGAATCCGAAGGCCGTCGGCGTGGTTGGTATGACCA
AGAGCAAAAGATAAAGAGGGTCAAAGAATACGGAGAGGACTATGGCCCTG
CTTATGTTGTTGCTGGCATACATGACGACGATGTTATAAACCATTGGAAA
GGCCTCAACTACCCAATCATGAACATCTTTGAACGCGGACTATGCGTTCT
GCAGTGTCGCTATATACATGCGGTTATCTTTTCCTCGCCGTTCTCCCCAA
GTCAGTCATACCTGGAGGCCATGCCCTTGGGCGTTCCAGATGCAGTTTAC
CACGGTCCTACTACGTTCATACCCCTCACCTATGATCCTTATATGGCACC
CAAGCGGATGGGCATCTTCAAAGAGACATCCAGCCATACGTACCAGCATG
TGAATGCCGGTGAGATCGTCGACAGGATATTGAAAAGTAGGGAAGCCTAT
GAAGAAAGACAGCGCGCCAAACTCGAAAAGGGTGCTGTTGAGGAGTTGGT
CAAGTCCAAAGAGTCGGCATCTGCCTAGATGGTCTCAACCCGTCGACAAC
TTACCAAAACGCTTCAATACAAGCATAAGGCCAAAGGGGATCCATTTGAA
AACTCTGGCAATTGCTTCTTAGTCTACATCTCCTCCATACGGAGTCGCCC
TACAAAAATGAGCGCCACTACAGAAGACATGATCCCCGCGCCAGGAGAGT
GGCCCGTGGACCCCCAAGCTGATGTACCCATTTCGGACAATCGTATCTGG
GTAGACGGATGCTTTGACTTTAGCCATCATGGGCATGCGGGTGCTATGCT
TCAGGCTCGCCAATTGGGAGACGAGCTTTATGTCGGTGTCCACTCTGACG
AAGCAATCCTCGAGAATAAGGGGCCGACAGTTATGACACTGGATGAAAGA
GTAGCTGCAGTGGAAGCATGTCGCTGGGTGACTCGCTGCGTTCCCTCTGC
CCCTTACGTGACATTTTTACCTTGGGTATCGCACTACGGCTGCAAGTATG
TCGTCCATGGTGATGATATCACCTCCGACAGCAATGGGGAGGACTGCTAC
CGGTTTGTCAAAGCTGCAGGGCGCTTTCGTGTGGTCAAGAGAACGCCGGG
GATATCCACGACAGACCTTGTTGGACGAATGCTTCTGTGTACGAAGAACC
ATTTCGTCAAGAGTGTAAAGGATACACTTAACGGAGAAGAAGGATCTGGA
AGTCTGGAAGAGCGCAAGCATTCGGCTGATAGCCTCATGAAAAGGATTCG
TGATTACGCCACTGACGAGACGGGTCTACAGCCTGGCCCGCAGGTTTGGA
TCTGGAACGGATCGAGTTCTGCGAAACTTGGGAACACAGTCGAGGAACCT
GGTGCATTTGAGACCATTGTAAACGGAAAGTTGCCAAGGCCGGGGCAGCG
AATTATCTATGTTGATGGGGGATTTGACTTGTTCTCATCCGGGCACATCG
AATTCCTTCGACAGGTCTTAACGCAGGAGGAATCCGAAGGCCGTCGGCGT
GGTTGGTATGACCAAGAGCAAAAGATAAAGAGGGTCAAAGAATACGGAGA
GGACTATGGCCCTGCTTATGTTGTTGCTGGCATACATGACGACGATGTTA
TAAACCATTGGAAAGGCCTCAACTACCCAATCATGAACATCTTTGAACGC
GGACTATGCGTTCTGCAGTGTCGCTATATACATGCGGTTATCTTTTCCTC
GCCGTTCTCCCCAAGTCAGTCATACCTGGAGGCCATGCCCTTGGGCGTTC
CAGATGCAGTTTACCACGGTCCTACTACGTTCATACCCCTCACCTATGAT
CCTTATATGGCACCCAAGCGGATGGGCATCTTCAAAGAGACATCCAGCCA
TACGTACCAGCATGTGAATGCCGGTGAGATCGTCGACAGGATATTGAAAA
GTAGGGAAGCCTATGAAGAAAGACAGCGCGCCAAACTCGAAAAGGGTGCT
GTTGAGGAGTTGGTCAAGTCCAAAGAGTCGGCATCTGCCTAGATGGTCTC
AACCCGTCGACAACTTACCAAAACGCTTCAATACAAGCATAAGGCCAAAG
GGGATCCATTTGAAAACTCTGGCAATTGCTTCTTAGTCTACATCTCCTCC
ATACGGAGTCGCCCTACAAAAATGAGCGCCACTACAGAAGACATGATCCC
CGCGCCAGGAGAGTGGCCCGTGGACCCCCAAGCTGATGTACCCATTTCGG
ACAATCGTATCTGGGTAGACGGATGCTTTGACTTTAGCCATCATGGGCAT
GCGGGTGCTATGCTTCAGGCTCGCCAATTGGGAGACGAGCTTTATGTCGG
TGTCCACTCTGACGAAGCAATCCTCGAGAATAAGGGGCCGACAGTTATGA
CACTGGATGAAAGAGTAGCTGCAGTGGAAGCATGTCGCTGGGTGACTCGC
TGCGTTCCCTCTGCCCCTTACGTGACATTTTTACCTTGGGTATCGCACTA
CGGCTGCAAGTATGTCGTCCATGGTGATGATATCACCTCCGACAGCAATG
GGGAGGACTGCTACCGGTTTGTCAAAGCTGCAGGGCGCTTTCGTGTGGTC
AAGAGAACGCCGGGGATATCCACGACAGACCTTGTTGGACGAATGCTTCT
GTGTACGAAGAACCATTTCGTCAAGAGTGTAAAGGATACACTTAACGGAG
AAGAAGGATCTGGAAGTCTGGAAGAGCGCAAGCATTCGGCTGATAGCCTC
ATGAAAAGGATTCGTGATTACGCCACTGACGAGACGGGTCTACAGCCTGG
CCCGCAGGTTTGGATCTGGAACGGATCGAGTTCTGCGAAACTTGGGAACA
CAGTCGAGGAACCTGGTGCATTTGAGACCATTGTAAACGGAAAGTTGCCA
AGGCCGGGGCAGCGAATTATCTATGTTGATGGGGGATTTGACTTGTTCTC
ATCCGGGCACATCGAATTCCTTCGACAGGTCTTAACGCAGGAGGAATCCG
AAGGCCGTCGGCGTGGTTGGTATGACCAAGAGCAAAAGATAAAGAGGGTC
AAAGAATACGGAGAGGACTATGGCCCTGCTTATGTTGTTGCTGGCATACA
TGACGACGATGTTATAAACCATTGGAAAGGCCTCAACTACCCAATCATGA
ACATCTTTGAACGCGGACTATGCGTTCTGCAGTGTCGCTATATACATGCG
GTTATCTTTTCCTCGCCGTTCTCCCCAAGTCAGTCATACCTGGAGGCCAT
GCCCTTGGGCGTTCCAGATGCAGTTTACCACGGTCCTACTACGTTCATAC
CCCTCACCTATGATCCTTATATGGCACCCAAGCGGATGGGCATCTTCAAA
GAGACATCCAGCCATACGTACCAGCATGTGAATGCCGGTGAGATCGTCGA
CAGGATATTGAAAAGTAGGGAAGCCTATGAAGAAAGACAGCGCGCCAAAC
TCGAAAAGGGTGCTGTTGAGGAGTTGGTCAAGTCCAAAGAGTCGGCATCT
GCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008337-T1.utr5p1 | KJC3_008337-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008337-T1.utr3p1 | KJC3_008337-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041723 |
| DBxref | InterPro:IPR004821 |
| DBxref | InterPro:IPR014729 |
| DBxref | PFAM:PF01467 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1738092..1739873 + |
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